RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 GAGE5Q13069 117 aa12.21□□□□□ -0.45
SSR4P1-202ENST00000429427 GAGE13Q4V321 117 aa12.21□□□□□ -0.45
SSR4P1-202ENST00000429427 FAM74A4Q5TZK3 123 aa12.21□□□□□ -0.45
SSR4P1-202ENST00000429427 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.45
SSR4P1-202ENST00000429427 ATP6V0E2Q8NHE4 81 aa12.21□□□□□ -0.45
SSR4P1-202ENST00000429427 IGHV3-38A0A0C4DH36 116 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 RAB19A4D1S5 217 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 CXCL1P09341 107 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 BCL2P10415 239 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 ZFP82Q8N141 532 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 Q8N3U1 123 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 KRTAP17-1Q9BYP8 105 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
SSR4P1-202ENST00000429427 MUC21A0A0G2JKD1 596 aa12.19□□□□□ -0.46
SSR4P1-202ENST00000429427 MUC21A0A140T8X8 626 aa12.19□□□□□ -0.46
SSR4P1-202ENST00000429427 RHODO00212 210 aa12.19□□□□□ -0.46
SSR4P1-202ENST00000429427 SNAI2O43623 268 aa12.19□□□□□ -0.46
SSR4P1-202ENST00000429427 EVI2AP22794 236 aa12.19□□□□□ -0.46
SSR4P1-202ENST00000429427 LINC01556Q5JQF7 62 aa12.19□□□□□ -0.46
SSR4P1-202ENST00000429427 LELP1Q5T871 98 aa12.19□□□□□ -0.46
SSR4P1-202ENST00000429427 MSRB1Q9NZV6 116 aa12.19□□□□□ -0.46
SSR4P1-202ENST00000429427 NKX2-5P52952 324 aaPredicted RBP12.18□□□□□ -0.46
SSR4P1-202ENST00000429427 ALKAL2Q6UX46 152 aa12.18□□□□□ -0.46
SSR4P1-202ENST00000429427 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
SSR4P1-202ENST00000429427 C19orf71A6NCJ1 209 aa12.17□□□□□ -0.46
SSR4P1-202ENST00000429427 TEX46H3BTG2 121 aa12.17□□□□□ -0.46
SSR4P1-202ENST00000429427 K7EP13 123 aa12.17□□□□□ -0.46
SSR4P1-202ENST00000429427 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
SSR4P1-202ENST00000429427 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.46
SSR4P1-202ENST00000429427 OR10J3Q5JRS4 329 aa12.17□□□□□ -0.46
SSR4P1-202ENST00000429427 ABCA13Q86UQ4 5058 aa12.17□□□□□ -0.46
SSR4P1-202ENST00000429427 PDE6DO43924 150 aa12.16□□□□□ -0.46
SSR4P1-202ENST00000429427 GZMBP10144 247 aa12.16□□□□□ -0.46
SSR4P1-202ENST00000429427 VAX2Q9UIW0 290 aa12.16□□□□□ -0.46
SSR4P1-202ENST00000429427 BOLA1Q9Y3E2 137 aa12.16□□□□□ -0.46
SSR4P1-202ENST00000429427 TRAV8-6A0A0B4J262 113 aa12.15□□□□□ -0.46
SSR4P1-202ENST00000429427 IFNA1P01562 189 aa12.15□□□□□ -0.46
SSR4P1-202ENST00000429427 IGHV3-30P01768 117 aa12.15□□□□□ -0.46
SSR4P1-202ENST00000429427 IGHV3-33P01772 117 aa12.15□□□□□ -0.46
SSR4P1-202ENST00000429427 IGHV3-30-3P0DP02 117 aa12.15□□□□□ -0.46
SSR4P1-202ENST00000429427 IGHV3-30-5P0DP03 117 aa12.15□□□□□ -0.46
SSR4P1-202ENST00000429427 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
SSR4P1-202ENST00000429427 MED9Q9NWA0 146 aa12.15□□□□□ -0.46
SSR4P1-202ENST00000429427 IBA57-AS1B1ANH7 110 aa12.14□□□□□ -0.47
SSR4P1-202ENST00000429427 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
SSR4P1-202ENST00000429427 GNG4P50150 75 aa12.14□□□□□ -0.47
SSR4P1-202ENST00000429427 C10orf126Q8N4M7 172 aa12.14□□□□□ -0.47
SSR4P1-202ENST00000429427 LYPD6BQ8NI32 183 aa12.14□□□□□ -0.47
SSR4P1-202ENST00000429427 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
SSR4P1-202ENST00000429427 A0A087WTM6 91 aa12.13□□□□□ -0.47
SSR4P1-202ENST00000429427 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
SSR4P1-202ENST00000429427 SMIM12Q96EX1 92 aa12.13□□□□□ -0.47
SSR4P1-202ENST00000429427 SSTP61278 116 aa12.12□□□□□ -0.47
SSR4P1-202ENST00000429427 OR2D3Q8NGH3 330 aa12.12□□□□□ -0.47
SSR4P1-202ENST00000429427 TRBV10-1A0A0K0K1A3 114 aa12.11□□□□□ -0.47
SSR4P1-202ENST00000429427 K7EN84 100 aa12.11□□□□□ -0.47
SSR4P1-202ENST00000429427 ERVFC1-1P60608 527 aa12.11□□□□□ -0.47
SSR4P1-202ENST00000429427 UBE2D3P61077 147 aa12.11□□□□□ -0.47
SSR4P1-202ENST00000429427 UBE2D2P62837 147 aa12.11□□□□□ -0.47
SSR4P1-202ENST00000429427 SPANXN1Q5VSR9 72 aa12.11□□□□□ -0.47
SSR4P1-202ENST00000429427 CDK2AP2O75956 126 aa12.1□□□□□ -0.47
SSR4P1-202ENST00000429427 RAB4BP61018 213 aa12.1□□□□□ -0.47
SSR4P1-202ENST00000429427 NEXN-AS1Q8NBZ9 246 aa12.1□□□□□ -0.47
SSR4P1-202ENST00000429427 OR10G8Q8NGN5 311 aa12.1□□□□□ -0.47
SSR4P1-202ENST00000429427 KRTAP4-5Q9BYR2 181 aa12.1□□□□□ -0.47
SSR4P1-202ENST00000429427 Q9HAA7 133 aa12.1□□□□□ -0.47
SSR4P1-202ENST00000429427 LRCOL1A6NCL2 159 aa12.09□□□□□ -0.47
SSR4P1-202ENST00000429427 TAGLN2P37802 199 aaKnown RBP12.09□□□□□ -0.47
SSR4P1-202ENST00000429427 ZNF56Q15929 161 aa12.09□□□□□ -0.47
SSR4P1-202ENST00000429427 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
SSR4P1-202ENST00000429427 FER1L6-AS1Q8NA97 138 aa12.09□□□□□ -0.47
SSR4P1-202ENST00000429427 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
SSR4P1-202ENST00000429427 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
SSR4P1-202ENST00000429427 A0A087WWC5 75 aa12.08□□□□□ -0.48
SSR4P1-202ENST00000429427 BLOC1S1P78537 153 aa12.08□□□□□ -0.48
SSR4P1-202ENST00000429427 NUDT10Q8NFP7 164 aa12.08□□□□□ -0.48
SSR4P1-202ENST00000429427 OCC1Q8TAD7 63 aa12.08□□□□□ -0.48
SSR4P1-202ENST00000429427 DAZAP1Q96EP5 407 aaKnown RBP12.08□□□□□ -0.48
SSR4P1-202ENST00000429427 NUDT11Q96G61 164 aa12.08□□□□□ -0.48
SSR4P1-202ENST00000429427 TPPP3Q9BW30 176 aa12.08□□□□□ -0.48
SSR4P1-202ENST00000429427 P01737 135 aa12.07□□□□□ -0.48
SSR4P1-202ENST00000429427 RPS20P60866 119 aaKnown RBP12.07□□□□□ -0.48
SSR4P1-202ENST00000429427 RPL36AP83881 106 aaKnown RBP12.07□□□□□ -0.48
SSR4P1-202ENST00000429427 LAGE3Q14657 143 aa12.07□□□□□ -0.48
SSR4P1-202ENST00000429427 NIT1Q86X76 327 aa12.07□□□□□ -0.48
SSR4P1-202ENST00000429427 RPL36ALQ969Q0 106 aaKnown RBP12.07□□□□□ -0.48
SSR4P1-202ENST00000429427 DNAJC30Q96LL9 226 aa12.07□□□□□ -0.48
SSR4P1-202ENST00000429427 RNASE7Q9H1E1 156 aaKnown RBP12.07□□□□□ -0.48
SSR4P1-202ENST00000429427 AP1S3Q96PC3 154 aa12.06□□□□□ -0.48
SSR4P1-202ENST00000429427 TMEM250H0YL14 139 aa12.05□□□□□ -0.48
SSR4P1-202ENST00000429427 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
SSR4P1-202ENST00000429427 PGPEP1Q9NXJ5 209 aa12.05□□□□□ -0.48
SSR4P1-202ENST00000429427 CTRLP40313 264 aa12.04□□□□□ -0.48
SSR4P1-202ENST00000429427 WFDC2Q14508 124 aa12.04□□□□□ -0.48
SSR4P1-202ENST00000429427 F5H697 171 aa12.03□□□□□ -0.48
SSR4P1-202ENST00000429427 M0QY20 66 aa12.03□□□□□ -0.48
SSR4P1-202ENST00000429427 EREGO14944 169 aa12.03□□□□□ -0.48
SSR4P1-202ENST00000429427 TOR2AQ5JU69 321 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms