RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
SMC1A-203ENST00000428014 XKRY2A2RUG3 117 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 IGHV3-53P01767 116 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 SFTA3P0C7M3 94 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 ARMS2P0C7Q2 107 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 GYPEP15421 78 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 SLC25A29Q8N8R3 303 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 OR10G8Q8NGN5 311 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 GNG13Q9P2W3 67 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 PHLDA3Q9Y5J5 127 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 LY96Q9Y6Y9 160 aa6.26□□□□□ -1.41
SMC1A-203ENST00000428014 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 C19orf71A6NCJ1 209 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 F2Z2F3 143 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 LAGE3Q14657 143 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 LELP1Q5T871 98 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 CNFNQ9BYD5 112 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 GTSF1LQ9H1H1 148 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 SMDT1Q9H4I9 107 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 MED9Q9NWA0 146 aa6.25□□□□□ -1.41
SMC1A-203ENST00000428014 IGLV2-18A0A075B6J9 118 aa6.24□□□□□ -1.41
SMC1A-203ENST00000428014 A0A1B0GV50 99 aa6.24□□□□□ -1.41
SMC1A-203ENST00000428014 IGLV2-8P01709 118 aa6.24□□□□□ -1.41
SMC1A-203ENST00000428014 CRYGDP07320 174 aa6.24□□□□□ -1.41
SMC1A-203ENST00000428014 EVI2AP22794 236 aa6.24□□□□□ -1.41
SMC1A-203ENST00000428014 GNG4P50150 75 aa6.24□□□□□ -1.41
SMC1A-203ENST00000428014 RAB4BP61018 213 aa6.24□□□□□ -1.41
SMC1A-203ENST00000428014 FAM210AQ96ND0 272 aa6.24□□□□□ -1.41
SMC1A-203ENST00000428014 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 FAT2Q9NYQ8 4349 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 TRAV8-6A0A0B4J262 113 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 RAB19A4D1S5 217 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 H3BVH4 76 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 IGLC6P0CF74 106 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 CACNG7P62955 275 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 TMEM97Q5BJF2 176 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 CENPWQ5EE01 88 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 PRR27Q6MZM9 219 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 ATP6V0E2Q8NHE4 81 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 FRZBQ92765 325 aa6.23□□□□□ -1.41
SMC1A-203ENST00000428014 DAZAP1Q96EP5 407 aaKnown RBP6.23□□□□□ -1.41
SMC1A-203ENST00000428014 TRBV20OR9-2A0A075B6H5 130 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 IGHV3-38A0A0C4DH36 116 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 LINC00862A6NCI5 91 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 RBFOX3A6NFN3 312 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 M0R2N4 97 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 PKIAP61925 76 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 CT83Q5H943 113 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 TOR2AQ5JU69 321 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-203ENST00000428014 FAM231DQ6ZW35 169 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 KRTAP1-5Q9BYS1 174 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 EIF5A2Q9GZV4 153 aaKnown RBP6.22□□□□□ -1.41
SMC1A-203ENST00000428014 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
SMC1A-203ENST00000428014 TRBV7-3A0A075B6L6 115 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 M0R036 132 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 P01737 135 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-203ENST00000428014 PEA15Q15121 130 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 UQCC3Q6UW78 93 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-203ENST00000428014 NHLRC2Q8NBF2 726 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 AP1S3Q96PC3 154 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 DERL1Q9BUN8 251 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
SMC1A-203ENST00000428014 IBA57-AS1B1ANH7 110 aa6.2□□□□□ -1.42
SMC1A-203ENST00000428014 H7C1H1 209 aa6.2□□□□□ -1.42
SMC1A-203ENST00000428014 CTRLP40313 264 aa6.2□□□□□ -1.42
SMC1A-203ENST00000428014 RPL36AP83881 106 aaKnown RBP6.2□□□□□ -1.42
SMC1A-203ENST00000428014 FAM74A3Q4VXF1 159 aa6.2□□□□□ -1.42
SMC1A-203ENST00000428014 RPL36ALQ969Q0 106 aaKnown RBP6.2□□□□□ -1.42
SMC1A-203ENST00000428014 DNAJC30Q96LL9 226 aa6.2□□□□□ -1.42
SMC1A-203ENST00000428014 MSRB1Q9NZV6 116 aa6.2□□□□□ -1.42
SMC1A-203ENST00000428014 KIF25-AS1Q9Y6Z4 181 aa6.2□□□□□ -1.42
SMC1A-203ENST00000428014 GRIFINA4D1Z8 144 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 M0R381 172 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 TRGC1P0CF51 173 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 LINC00315P59091 139 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 UBE2D3P61077 147 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 UBE2D2P62837 147 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 SPANXN1Q5VSR9 72 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 DAZ4Q86SG3 579 aaKnown RBP6.19□□□□□ -1.42
SMC1A-203ENST00000428014 COMMD7Q86VX2 200 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 FER1L6-AS1Q8NA97 138 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 GFRA4Q9GZZ7 299 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 DAZ3Q9NR90 486 aaKnown RBP6.19□□□□□ -1.42
SMC1A-203ENST00000428014 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
SMC1A-203ENST00000428014 TRAV8-3A0A0A6YYJ7 113 aa6.18□□□□□ -1.42
SMC1A-203ENST00000428014 CDK2AP2O75956 126 aa6.18□□□□□ -1.42
SMC1A-203ENST00000428014 SMIM17P0DL12 118 aa6.18□□□□□ -1.42
SMC1A-203ENST00000428014 ELOBQ15370 118 aa6.18□□□□□ -1.42
SMC1A-203ENST00000428014 WFDC10BQ8IUB3 73 aa6.18□□□□□ -1.42
SMC1A-203ENST00000428014 OR2D3Q8NGH3 330 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms