RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 UBE2WQ96B02 151 aa10.58□□□□□ -0.72
RPL28-202ENST00000426763 MPV17L2Q567V2 206 aa10.58□□□□□ -0.72
RPL28-202ENST00000426763 C1orf43Q9BWL3 253 aa10.58□□□□□ -0.72
RPL28-202ENST00000426763 TRAV8-2A0A0B4J237 113 aa10.57□□□□□ -0.72
RPL28-202ENST00000426763 PSMG3-AS1Q96PY0 264 aa10.57□□□□□ -0.72
RPL28-202ENST00000426763 XCL1P47992 114 aa10.57□□□□□ -0.72
RPL28-202ENST00000426763 ZNF503Q96F45 646 aa10.57□□□□□ -0.72
RPL28-202ENST00000426763 GATA1P15976 413 aaPredicted RBP10.57□□□□□ -0.72
RPL28-202ENST00000426763 RPL39LQ96EH5 51 aaKnown RBP10.57□□□□□ -0.72
RPL28-202ENST00000426763 TMEM263Q8WUH6 116 aaKnown RBP10.56□□□□□ -0.72
RPL28-202ENST00000426763 MBD6Q96DN6 1003 aa10.56□□□□□ -0.72
RPL28-202ENST00000426763 MSRB1Q9NZV6 116 aa10.56□□□□□ -0.72
RPL28-202ENST00000426763 LAMTOR3Q9UHA4 124 aa10.56□□□□□ -0.72
RPL28-202ENST00000426763 Q9HAA7 133 aa10.56□□□□□ -0.72
RPL28-202ENST00000426763 HHLA3Q9XRX5 114 aa10.56□□□□□ -0.72
RPL28-202ENST00000426763 DEFB114Q30KQ6 69 aa10.56□□□□□ -0.72
RPL28-202ENST00000426763 NXPH4O95158 308 aa10.56□□□□□ -0.72
RPL28-202ENST00000426763 ZNF702PQ9H963 129 aa10.56□□□□□ -0.72
RPL28-202ENST00000426763 SPINK8P0C7L1 97 aa10.55□□□□□ -0.72
RPL28-202ENST00000426763 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
RPL28-202ENST00000426763 Q8N6K4 173 aa10.55□□□□□ -0.72
RPL28-202ENST00000426763 F8W735 103 aaPredicted RBP10.55□□□□□ -0.72
RPL28-202ENST00000426763 Q6ZWC4 215 aa10.55□□□□□ -0.72
RPL28-202ENST00000426763 HILS1P60008 231 aa10.55□□□□□ -0.72
RPL28-202ENST00000426763 ESM1Q9NQ30 184 aa10.55□□□□□ -0.72
RPL28-202ENST00000426763 DEFB4AO15263 64 aa10.54□□□□□ -0.72
RPL28-202ENST00000426763 ZNF664Q8N3J9 261 aa10.54□□□□□ -0.72
RPL28-202ENST00000426763 KLK5Q9Y337 293 aaPredicted RBP10.54□□□□□ -0.72
RPL28-202ENST00000426763 KIR3DS1Q14943 382 aa10.54□□□□□ -0.72
RPL28-202ENST00000426763 K7EQG2 157 aa10.54□□□□□ -0.72
RPL28-202ENST00000426763 POLR3KQ9Y2Y1 108 aaPredicted RBP10.54□□□□□ -0.72
RPL28-202ENST00000426763 CCDC168Q8NDH2 2452 aa10.54□□□□□ -0.72
RPL28-202ENST00000426763 ODF3Q96PU9 254 aa10.54□□□□□ -0.72
RPL28-202ENST00000426763 TRBV7-3A0A075B6L6 115 aa10.53□□□□□ -0.72
RPL28-202ENST00000426763 J3QQQ9 107 aa10.53□□□□□ -0.72
RPL28-202ENST00000426763 TLN1Q9Y490 2541 aaKnown RBP10.53□□□□□ -0.72
RPL28-202ENST00000426763 CTRLP40313 264 aa10.53□□□□□ -0.72
RPL28-202ENST00000426763 NAA38Q9BRA0 125 aaKnown RBP10.53□□□□□ -0.72
RPL28-202ENST00000426763 KRTAP10-9P60411 292 aa10.53□□□□□ -0.72
RPL28-202ENST00000426763 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
RPL28-202ENST00000426763 PKIGQ9Y2B9 76 aa10.53□□□□□ -0.72
RPL28-202ENST00000426763 LINC01006Q8NI28 216 aa10.52□□□□□ -0.72
RPL28-202ENST00000426763 PSMB8P28062 276 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 LURAP1LQ8IV03 231 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 ZFP2Q6ZN57 461 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 ZNF747Q9BV97 191 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 IGHV3-30P01768 117 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 IGHV3-33P01772 117 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 IGHV3-30-3P0DP02 117 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 C10orf99Q6UWK7 81 aa10.52□□□□□ -0.73
RPL28-202ENST00000426763 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.73
RPL28-202ENST00000426763 AMTNQ6UX39 209 aa10.51□□□□□ -0.73
RPL28-202ENST00000426763 NAV3Q8IVL0 2385 aa10.51□□□□□ -0.73
RPL28-202ENST00000426763 ZFAND3Q9H8U3 227 aa10.51□□□□□ -0.73
RPL28-202ENST00000426763 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
RPL28-202ENST00000426763 DKK2Q9UBU2 259 aa10.51□□□□□ -0.73
RPL28-202ENST00000426763 SONP18583 2426 aaKnown RBP10.51□□□□□ -0.73
RPL28-202ENST00000426763 TRAV8-4A0A0B4J246 113 aa10.51□□□□□ -0.73
RPL28-202ENST00000426763 SLC25A29Q8N8R3 303 aa10.5□□□□□ -0.73
RPL28-202ENST00000426763 C2orf82Q6UX34 121 aa10.5□□□□□ -0.73
RPL28-202ENST00000426763 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
RPL28-202ENST00000426763 IGLL1P15814 213 aa10.5□□□□□ -0.73
RPL28-202ENST00000426763 PRO0255Q9UI72 69 aa10.5□□□□□ -0.73
RPL28-202ENST00000426763 COX8AP10176 69 aa10.5□□□□□ -0.73
RPL28-202ENST00000426763 TRAV8-3A0A0A6YYJ7 113 aa10.49□□□□□ -0.73
RPL28-202ENST00000426763 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
RPL28-202ENST00000426763 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
RPL28-202ENST00000426763 C19orf71A6NCJ1 209 aa10.49□□□□□ -0.73
RPL28-202ENST00000426763 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
RPL28-202ENST00000426763 CDK2AP2O75956 126 aa10.49□□□□□ -0.73
RPL28-202ENST00000426763 C11orf45Q8TAV5 145 aa10.48□□□□□ -0.73
RPL28-202ENST00000426763 A0A1B0GV72 72 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 COX7A2LO14548 114 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 AVPP01185 164 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 EDA2RQ9HAV5 297 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 COL4A2P08572 1712 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 TRBV10-1A0A0K0K1A3 114 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 IGLC3P0DOY3 106 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 HERV-K104P63124 156 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 A0A1W2PPR1 153 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 FGF6P10767 208 aa10.47□□□□□ -0.73
RPL28-202ENST00000426763 TRAV13-2A0A0B4J235 113 aa10.46□□□□□ -0.73
RPL28-202ENST00000426763 SNHG12Q9BXW3 62 aa10.46□□□□□ -0.73
RPL28-202ENST00000426763 CAMK2N2Q96S95 79 aa10.46□□□□□ -0.73
RPL28-202ENST00000426763 Q9H8V8 135 aa10.46□□□□□ -0.73
RPL28-202ENST00000426763 IGLL5B9A064 214 aa10.46□□□□□ -0.74
RPL28-202ENST00000426763 TM2D2Q9BX73 214 aa10.46□□□□□ -0.74
RPL28-202ENST00000426763 KIAA1549Q9HCM3 1950 aa10.46□□□□□ -0.74
RPL28-202ENST00000426763 IGLV1-40P01703 118 aa10.45□□□□□ -0.74
RPL28-202ENST00000426763 ZNF80P51504 273 aaPredicted RBP10.45□□□□□ -0.74
RPL28-202ENST00000426763 TAL2Q16559 108 aa10.45□□□□□ -0.74
RPL28-202ENST00000426763 C21orf62-AS1Q17RA5 79 aa10.45□□□□□ -0.74
RPL28-202ENST00000426763 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
RPL28-202ENST00000426763 LYRM9A8MSI8 78 aa10.45□□□□□ -0.74
RPL28-202ENST00000426763 VSIG2Q96IQ7 327 aa10.45□□□□□ -0.74
RPL28-202ENST00000426763 SPATA25Q9BR10 227 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms