RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
ACTB-204ENST00000425660 C1QTNF4Q9BXJ3 329 aa11.05□□□□□ -0.64
ACTB-204ENST00000425660 LOC389332A0A1B0GUA5 103 aa11.05□□□□□ -0.64
ACTB-204ENST00000425660 COL6A5A8TX70 2615 aa11.05□□□□□ -0.64
ACTB-204ENST00000425660 SMIM17P0DL12 118 aa11.05□□□□□ -0.64
ACTB-204ENST00000425660 JPT2Q9H910 190 aa11.05□□□□□ -0.64
ACTB-204ENST00000425660 NXT2Q9NPJ8 142 aaKnown RBP11.05□□□□□ -0.64
ACTB-204ENST00000425660 NOTCH3Q9UM47 2321 aa11.04□□□□□ -0.64
ACTB-204ENST00000425660 PRM2P04554 102 aa11.04□□□□□ -0.64
ACTB-204ENST00000425660 CSNK1G2-AS1Q8NCQ2 148 aa11.04□□□□□ -0.64
ACTB-204ENST00000425660 IGLV2-18A0A075B6J9 118 aa11.03□□□□□ -0.64
ACTB-204ENST00000425660 M0R2P5 195 aa11.03□□□□□ -0.64
ACTB-204ENST00000425660 CRYGDP07320 174 aa11.03□□□□□ -0.64
ACTB-204ENST00000425660 PMCHL1Q16048 86 aa11.03□□□□□ -0.64
ACTB-204ENST00000425660 RASL10AQ92737 203 aa11.03□□□□□ -0.64
ACTB-204ENST00000425660 SPXQ9BT56 116 aa11.03□□□□□ -0.64
ACTB-204ENST00000425660 TMEM208Q9BTX3 173 aa11.03□□□□□ -0.64
ACTB-204ENST00000425660 NIT2Q9NQR4 276 aa11.03□□□□□ -0.64
ACTB-204ENST00000425660 PPP1R17O96001 155 aa11.02□□□□□ -0.64
ACTB-204ENST00000425660 CDPF1Q6NVV7 123 aa11.02□□□□□ -0.64
ACTB-204ENST00000425660 SHISA2Q6UWI4 295 aa11.02□□□□□ -0.64
ACTB-204ENST00000425660 IL17DQ8TAD2 202 aa11.02□□□□□ -0.64
ACTB-204ENST00000425660 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.64
ACTB-204ENST00000425660 C20orf78Q9BR46 151 aa11.02□□□□□ -0.64
ACTB-204ENST00000425660 NDUFAF3Q9BU61 184 aa11.02□□□□□ -0.64
ACTB-204ENST00000425660 A0A087WWL8 130 aa11.02□□□□□ -0.65
ACTB-204ENST00000425660 A0A096LNJ9 63 aa11.02□□□□□ -0.65
ACTB-204ENST00000425660 MGPP08493 103 aa11.02□□□□□ -0.65
ACTB-204ENST00000425660 RPL35AP18077 110 aaKnown RBP11.02□□□□□ -0.65
ACTB-204ENST00000425660 TMEM158Q8WZ71 300 aa11.02□□□□□ -0.65
ACTB-204ENST00000425660 IGLL1P15814 213 aa11.01□□□□□ -0.65
ACTB-204ENST00000425660 AZU1P20160 251 aa11.01□□□□□ -0.65
ACTB-204ENST00000425660 ZNF705AQ6ZN79 300 aaPredicted RBP11.01□□□□□ -0.65
ACTB-204ENST00000425660 C3orf56Q8N813 242 aa11.01□□□□□ -0.65
ACTB-204ENST00000425660 Q8N8P6 123 aa11.01□□□□□ -0.65
ACTB-204ENST00000425660 GOLT1BQ9Y3E0 138 aa11.01□□□□□ -0.65
ACTB-204ENST00000425660 STAB1Q9NY15 2570 aa11.01□□□□□ -0.65
ACTB-204ENST00000425660 LEPROTL1O95214 131 aa11□□□□□ -0.65
ACTB-204ENST00000425660 C3orf79P0CE67 100 aa11□□□□□ -0.65
ACTB-204ENST00000425660 SUMO2P61956 95 aaKnown RBP11□□□□□ -0.65
ACTB-204ENST00000425660 TMEM263Q8WUH6 116 aaKnown RBP11□□□□□ -0.65
ACTB-204ENST00000425660 A8MWV9 139 aa11□□□□□ -0.65
ACTB-204ENST00000425660 KRTDAPP60985 99 aa11□□□□□ -0.65
ACTB-204ENST00000425660 SUMO4Q6EEV6 95 aa11□□□□□ -0.65
ACTB-204ENST00000425660 MDFIQ99750 246 aa11□□□□□ -0.65
ACTB-204ENST00000425660 IGHV3OR16-12A0A075B7B8 117 aa10.99□□□□□ -0.65
ACTB-204ENST00000425660 FAM74A4Q5TZK3 123 aa10.99□□□□□ -0.65
ACTB-204ENST00000425660 UFSP1Q6NVU6 142 aa10.99□□□□□ -0.65
ACTB-204ENST00000425660 Q8N976 141 aa10.99□□□□□ -0.65
ACTB-204ENST00000425660 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
ACTB-204ENST00000425660 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
ACTB-204ENST00000425660 CSTL1Q9H114 145 aa10.99□□□□□ -0.65
ACTB-204ENST00000425660 EDA2RQ9HAV5 297 aa10.99□□□□□ -0.65
ACTB-204ENST00000425660 SCGB1D1O95968 90 aa10.98□□□□□ -0.65
ACTB-204ENST00000425660 RPL32P62910 135 aaKnown RBP10.98□□□□□ -0.65
ACTB-204ENST00000425660 HSPB8Q9UJY1 196 aa10.98□□□□□ -0.65
ACTB-204ENST00000425660 K7EMI3 77 aa10.98□□□□□ -0.65
ACTB-204ENST00000425660 M0QY20 66 aa10.98□□□□□ -0.65
ACTB-204ENST00000425660 HBDP02042 147 aa10.98□□□□□ -0.65
ACTB-204ENST00000425660 BTF3P20290 206 aaKnown RBP10.98□□□□□ -0.65
ACTB-204ENST00000425660 C12orf54Q6X4T0 127 aa10.98□□□□□ -0.65
ACTB-204ENST00000425660 TRBV6-5A0A0K0K1A5 114 aa10.97□□□□□ -0.65
ACTB-204ENST00000425660 PLAC8L1A1L4L8 177 aa10.96□□□□□ -0.65
ACTB-204ENST00000425660 F5H697 171 aa10.96□□□□□ -0.65
ACTB-204ENST00000425660 DAZ2Q13117 558 aaKnown RBP10.96□□□□□ -0.65
ACTB-204ENST00000425660 ZNF56Q15929 161 aa10.96□□□□□ -0.65
ACTB-204ENST00000425660 LINC00173Q6ZV60 143 aa10.96□□□□□ -0.65
ACTB-204ENST00000425660 C16orf74Q96GX8 76 aa10.96□□□□□ -0.65
ACTB-204ENST00000425660 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.65
ACTB-204ENST00000425660 FCER1GP30273 86 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 LGALS9BQ3B8N2 356 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 CFAP126Q5VTH2 177 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 KIR2DL5BA0A0G2JN68 375 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 KIR2DL5BA0A0G2JPC4 375 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 RHODO00212 210 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
ACTB-204ENST00000425660 LAGE3Q14657 143 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 TEX43Q6ZNM6 134 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 KIR2DL5AQ8N109 375 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 KIR2DL5BQ8NHK3 375 aa10.95□□□□□ -0.66
ACTB-204ENST00000425660 MRPL16Q9NX20 251 aaKnown RBP10.95□□□□□ -0.66
ACTB-204ENST00000425660 SYS1-DBNDD2H3BUS1 97 aa10.94□□□□□ -0.66
ACTB-204ENST00000425660 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
ACTB-204ENST00000425660 MAP1LC3CQ9BXW4 147 aa10.94□□□□□ -0.66
ACTB-204ENST00000425660 ST20Q9HBF5 79 aa10.94□□□□□ -0.66
ACTB-204ENST00000425660 RS1O15537 224 aa10.93□□□□□ -0.66
ACTB-204ENST00000425660 S100A12P80511 92 aa10.93□□□□□ -0.66
ACTB-204ENST00000425660 RRN3P1Q2M238 152 aa10.93□□□□□ -0.66
ACTB-204ENST00000425660 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
ACTB-204ENST00000425660 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
ACTB-204ENST00000425660 H7C1H1 209 aa10.93□□□□□ -0.66
ACTB-204ENST00000425660 TCAPO15273 167 aa10.93□□□□□ -0.66
ACTB-204ENST00000425660 OVOL2Q9BRP0 275 aa10.93□□□□□ -0.66
ACTB-204ENST00000425660 EGFEM1PQ0D2K5 195 aa10.92□□□□□ -0.66
ACTB-204ENST00000425660 ORMDL2Q53FV1 153 aa10.92□□□□□ -0.66
ACTB-204ENST00000425660 PET117Q6UWS5 81 aa10.92□□□□□ -0.66
ACTB-204ENST00000425660 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
ACTB-204ENST00000425660 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
ACTB-204ENST00000425660 VCYO14598 125 aa10.91□□□□□ -0.66
ACTB-204ENST00000425660 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms