RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CLUHP3Q96NS8 147 aa2.72□□□□□ -1.97
TOP2A-201ENST00000423485 SCGB3A1Q96QR1 104 aa2.72□□□□□ -1.97
TOP2A-201ENST00000423485 CCL28Q9NRJ3 127 aa2.72□□□□□ -1.97
TOP2A-201ENST00000423485 IGKV1-12A0A0C4DH73 117 aa2.72□□□□□ -1.97
TOP2A-201ENST00000423485 GASTP01350 101 aa2.72□□□□□ -1.97
TOP2A-201ENST00000423485 STAG3L2P0CL84 134 aa2.72□□□□□ -1.97
TOP2A-201ENST00000423485 IFI27P40305 119 aaPredicted RBP2.72□□□□□ -1.97
TOP2A-201ENST00000423485 NPCDR1Q9BY65 106 aa2.72□□□□□ -1.97
TOP2A-201ENST00000423485 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.97
TOP2A-201ENST00000423485 IGHV1OR15-1A0A075B7D0 117 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 WI2-2373I1.2A0A1W2PRP0 233 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 C7orf77A4D0Y5 90 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 A8MWL6 223 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 SERF2P84101 59 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 GAGE6Q13070 117 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 MLANAQ16655 118 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 PDZD11Q5EBL8 140 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 GTF2H5Q6ZYL4 71 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 CACNG8Q8WXS5 425 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 C20orf141Q9NUB4 165 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 NPIPB5A8MRT5 1133 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 NDUFA1O15239 70 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 GNG4P50150 75 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 EGFEM1PQ0D2K5 195 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 FLVCR1-AS1Q8TAF5 88 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 SPANXB1Q9NS25 103 aaPredicted RBP2.71□□□□□ -1.98
TOP2A-201ENST00000423485 NACAE9PAV3 2078 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF705EA8MWA4 302 aaPredicted RBP2.71□□□□□ -1.98
TOP2A-201ENST00000423485 WISP2O76076 250 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM50AO95807 157 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 LINC01547P58512 204 aaPredicted RBP2.71□□□□□ -1.98
TOP2A-201ENST00000423485 LINC00158P58513 81 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 PYY3Q5JQD4 70 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 DYNC2H1Q8NCM8 4307 aaKnown RBP2.71□□□□□ -1.98
TOP2A-201ENST00000423485 F8P00451 2351 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 IFITM10A6NMD0 228 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 K7EMT4 169 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 NAPSAO96009 420 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 CCL1P22362 96 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 PROK1P58294 105 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM128Q5BJH2 165 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 SFRP2Q96HF1 295 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 MRPL32Q9BYC8 188 aaKnown RBP2.71□□□□□ -1.98
TOP2A-201ENST00000423485 ST20Q9HBF5 79 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 AGRNO00468 2067 aa2.71□□□□□ -1.98
TOP2A-201ENST00000423485 SFT2D2O95562 160 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF664Q8N3J9 261 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 CD177Q8N6Q3 437 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 CCDC140Q96MF4 163 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 LIMD2Q9BT23 127 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 FLVCR2Q9UPI3 526 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 A0A087WWL8 130 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 LGALS9O00182 355 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 APOHP02749 345 aaPredicted RBP2.7□□□□□ -1.98
TOP2A-201ENST00000423485 TRGC2P03986 189 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 CYP2G1PQ6ZSU1 146 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 ZAR1Q86SH2 424 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 SBSPONQ8IVN8 264 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF439Q8NDP4 499 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 LINC00476Q8WZB0 136 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 SLC25A39Q9BZJ4 359 aaPredicted RBP2.7□□□□□ -1.98
TOP2A-201ENST00000423485 SMIM3Q9BZL3 60 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF319Q9P2F9 582 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 IGHV3-38A0A0C4DH36 116 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 TRBV7-9A0A0J9YWB2 115 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 A0A1B0GV50 99 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 FNDC10F2Z333 226 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 M0R2P5 195 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF134P52741 427 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 PMVKQ15126 192 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 IL36BQ9NZH7 164 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 KLK12Q9UKR0 248 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 FAT3Q8TDW7 4589 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 TRBV6-6A0A0A6YYG2 114 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 NBDYA0A0U1RRE5 68 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 MAP1LC3B2A6NCE7 125 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 LY6LH3BQJ8 138 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 NDUFS5O43920 106 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 NDUFB1O75438 58 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 ADCYAP1P18509 176 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 ERASQ7Z444 233 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF575Q86XF7 245 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 C8orf31Q8N9H6 132 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 MAP1LC3BQ9GZQ8 125 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 TFF3Q07654 80 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 DEFB114Q30KQ6 69 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 AMTNQ6UX39 209 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 SS18L2Q9UHA2 77 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 U3KQE9 123 aa2.7□□□□□ -1.98
TOP2A-201ENST00000423485 LINC01549A6NIU2 74 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM238C9JI98 176 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 K7EIL1 84 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 DNAL4O96015 105 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 IGKV1-39P01597 117 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 IGKV1D-39P04432 117 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 LGALS3P17931 250 aaKnown RBP2.69□□□□□ -1.98
TOP2A-201ENST00000423485 LINC00311Q8N616 119 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 OR10AC1Q8NH08 325 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM263Q8WUH6 116 aaKnown RBP2.69□□□□□ -1.98
TOP2A-201ENST00000423485 RASL10AQ92737 203 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms