RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
SREBF1-206ENST00000423161 FAM162BQ5T6X4 162 aa12.25□□□□□ -0.45
SREBF1-206ENST00000423161 COX8CQ7Z4L0 72 aa12.25□□□□□ -0.45
SREBF1-206ENST00000423161 FMC1Q96HJ9 113 aa12.25□□□□□ -0.45
SREBF1-206ENST00000423161 LECT2O14960 151 aa12.24□□□□□ -0.45
SREBF1-206ENST00000423161 C1QBP02746 253 aa12.24□□□□□ -0.45
SREBF1-206ENST00000423161 PHLDA3Q9Y5J5 127 aa12.24□□□□□ -0.45
SREBF1-206ENST00000423161 A0A087WWL8 130 aa12.23□□□□□ -0.45
SREBF1-206ENST00000423161 TPT1P13693 172 aaKnown RBP12.23□□□□□ -0.45
SREBF1-206ENST00000423161 SFRP2Q96HF1 295 aa12.23□□□□□ -0.45
SREBF1-206ENST00000423161 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
SREBF1-206ENST00000423161 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-206ENST00000423161 TMSB15BA0A087X1C1 80 aa12.22□□□□□ -0.45
SREBF1-206ENST00000423161 G3V3Q6 166 aa12.22□□□□□ -0.45
SREBF1-206ENST00000423161 M0R381 172 aa12.22□□□□□ -0.45
SREBF1-206ENST00000423161 ARPC5O15511 151 aa12.22□□□□□ -0.45
SREBF1-206ENST00000423161 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
SREBF1-206ENST00000423161 LINC01559Q495D7 138 aa12.22□□□□□ -0.45
SREBF1-206ENST00000423161 TRBV6-1A0A0K0K1D8 114 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 LTAP01374 205 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 FHITP49789 147 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 CST9LP1Q5W188 147 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 NIT1Q86X76 327 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 TCEAL7Q9BRU2 100 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 CYTL1Q9NRR1 136 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 COX11Q9Y6N1 276 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 MYCBP2O75592 4640 aa12.21□□□□□ -0.45
SREBF1-206ENST00000423161 AKR1C3P42330 323 aa12.2□□□□□ -0.46
SREBF1-206ENST00000423161 ZFP82Q8N141 532 aa12.2□□□□□ -0.46
SREBF1-206ENST00000423161 STOML3Q8TAV4 291 aa12.2□□□□□ -0.46
SREBF1-206ENST00000423161 BAALCQ8WXS3 180 aa12.2□□□□□ -0.46
SREBF1-206ENST00000423161 RMI2Q96E14 147 aa12.2□□□□□ -0.46
SREBF1-206ENST00000423161 SEC11BP0C7V7 166 aa12.19□□□□□ -0.46
SREBF1-206ENST00000423161 Q6ZSA8 131 aa12.19□□□□□ -0.46
SREBF1-206ENST00000423161 KLK12Q9UKR0 248 aa12.19□□□□□ -0.46
SREBF1-206ENST00000423161 IGKV2D-24A0A075B6R9 120 aa12.18□□□□□ -0.46
SREBF1-206ENST00000423161 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
SREBF1-206ENST00000423161 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
SREBF1-206ENST00000423161 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
SREBF1-206ENST00000423161 A0A087WX48 190 aa12.17□□□□□ -0.46
SREBF1-206ENST00000423161 TRBV10-1A0A0K0K1A3 114 aa12.17□□□□□ -0.46
SREBF1-206ENST00000423161 PAGE4O60829 102 aa12.17□□□□□ -0.46
SREBF1-206ENST00000423161 DNAH8Q96JB1 4490 aa12.17□□□□□ -0.46
SREBF1-206ENST00000423161 KCNIP4Q6PIL6 250 aa12.16□□□□□ -0.46
SREBF1-206ENST00000423161 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
SREBF1-206ENST00000423161 CHCHD7Q9BUK0 85 aa12.16□□□□□ -0.46
SREBF1-206ENST00000423161 TRBV7-3A0A075B6L6 115 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 SMLR1H3BR10 107 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 PLA2G1BP04054 148 aaKnown RBP12.15□□□□□ -0.46
SREBF1-206ENST00000423161 UBE2D3P61077 147 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 UBE2D2P62837 147 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 ELOBQ15370 118 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 RGS21Q2M5E4 152 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 LINC01620Q4KN68 170 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 LINC00528Q8N1L1 170 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 Q8N976 141 aa12.15□□□□□ -0.46
SREBF1-206ENST00000423161 RBFOX3A6NFN3 312 aa12.14□□□□□ -0.47
SREBF1-206ENST00000423161 RPL19P84098 196 aaKnown RBP12.14□□□□□ -0.47
SREBF1-206ENST00000423161 FAM213BQ8TBF2 198 aa12.14□□□□□ -0.47
SREBF1-206ENST00000423161 A0A1B0GV50 99 aa12.13□□□□□ -0.47
SREBF1-206ENST00000423161 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
SREBF1-206ENST00000423161 S100A9P06702 114 aaKnown RBP12.13□□□□□ -0.47
SREBF1-206ENST00000423161 ZNF56Q15929 161 aa12.13□□□□□ -0.47
SREBF1-206ENST00000423161 OR10G8Q8NGN5 311 aa12.13□□□□□ -0.47
SREBF1-206ENST00000423161 OR10AG1Q8NH19 301 aa12.13□□□□□ -0.47
SREBF1-206ENST00000423161 SFT2D1Q8WV19 159 aa12.13□□□□□ -0.47
SREBF1-206ENST00000423161 PFDN1O60925 122 aa12.12□□□□□ -0.47
SREBF1-206ENST00000423161 CXCL1P09341 107 aa12.12□□□□□ -0.47
SREBF1-206ENST00000423161 RAB4BP61018 213 aa12.12□□□□□ -0.47
SREBF1-206ENST00000423161 ZNF345Q14585 488 aa12.12□□□□□ -0.47
SREBF1-206ENST00000423161 KCNRGQ8N5I3 272 aa12.12□□□□□ -0.47
SREBF1-206ENST00000423161 MBD3L1Q8WWY6 194 aa12.12□□□□□ -0.47
SREBF1-206ENST00000423161 UMAD1C9J7I0 102 aa12.11□□□□□ -0.47
SREBF1-206ENST00000423161 J3QL48 77 aa12.11□□□□□ -0.47
SREBF1-206ENST00000423161 Q0VG73 95 aa12.11□□□□□ -0.47
SREBF1-206ENST00000423161 ATRAIDQ6UW56 229 aa12.11□□□□□ -0.47
SREBF1-206ENST00000423161 SCXQ7RTU7 201 aa12.11□□□□□ -0.47
SREBF1-206ENST00000423161 BAGE2Q86Y30 109 aa12.11□□□□□ -0.47
SREBF1-206ENST00000423161 NEXN-AS1Q8NBZ9 246 aa12.11□□□□□ -0.47
SREBF1-206ENST00000423161 ZNF471Q9BX82 626 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-206ENST00000423161 TRBV6-8A0A0A6YYG3 113 aa12.1□□□□□ -0.47
SREBF1-206ENST00000423161 TMEM262E9PQX1 116 aa12.1□□□□□ -0.47
SREBF1-206ENST00000423161 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
SREBF1-206ENST00000423161 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
SREBF1-206ENST00000423161 SNAI2O43623 268 aa12.09□□□□□ -0.47
SREBF1-206ENST00000423161 SPANXN1Q5VSR9 72 aa12.09□□□□□ -0.47
SREBF1-206ENST00000423161 PRR27Q6MZM9 219 aa12.09□□□□□ -0.47
SREBF1-206ENST00000423161 MUC21A0A0G2JKD1 596 aa12.08□□□□□ -0.48
SREBF1-206ENST00000423161 MUC21A0A140T8X8 626 aa12.08□□□□□ -0.48
SREBF1-206ENST00000423161 CRPP02741 224 aa12.08□□□□□ -0.48
SREBF1-206ENST00000423161 MPV17L2Q567V2 206 aa12.08□□□□□ -0.48
SREBF1-206ENST00000423161 C15orf54Q8N8G6 183 aa12.08□□□□□ -0.48
SREBF1-206ENST00000423161 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-206ENST00000423161 SSBP4Q9BWG4 385 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-206ENST00000423161 F5H697 171 aa12.07□□□□□ -0.48
SREBF1-206ENST00000423161 ANGP03950 147 aaKnown RBP12.07□□□□□ -0.48
SREBF1-206ENST00000423161 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
SREBF1-206ENST00000423161 OR5AL1P0C617 328 aa12.07□□□□□ -0.48
SREBF1-206ENST00000423161 C14orf177Q52M58 125 aa12.07□□□□□ -0.48
SREBF1-206ENST00000423161 ENHOQ6UWT2 76 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms