RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ZFP82Q8N141 532 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 C14orf178Q8N769 122 aaPredicted RBP11.12□□□□□ -0.63
LINC00404-201ENST00000418660 C11orf52Q96A22 123 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 FAM74A4Q5TZK3 123 aa11.11□□□□□ -0.63
LINC00404-201ENST00000418660 SLC51BQ86UW2 128 aa11.11□□□□□ -0.63
LINC00404-201ENST00000418660 Q9UF83 564 aa11.11□□□□□ -0.63
LINC00404-201ENST00000418660 A0A087WWL8 130 aa11.1□□□□□ -0.63
LINC00404-201ENST00000418660 IBA57-AS1B1ANH7 110 aa11.1□□□□□ -0.63
LINC00404-201ENST00000418660 RPL35P42766 123 aaKnown RBP11.1□□□□□ -0.63
LINC00404-201ENST00000418660 RPL19P84098 196 aaKnown RBP11.1□□□□□ -0.63
LINC00404-201ENST00000418660 KRTAP17-1Q9BYP8 105 aa11.1□□□□□ -0.63
LINC00404-201ENST00000418660 PGPEP1Q9NXJ5 209 aa11.1□□□□□ -0.63
LINC00404-201ENST00000418660 A0A087WTM6 91 aa11.09□□□□□ -0.63
LINC00404-201ENST00000418660 PRR27Q6MZM9 219 aa11.09□□□□□ -0.63
LINC00404-201ENST00000418660 DERL1Q9BUN8 251 aa11.09□□□□□ -0.63
LINC00404-201ENST00000418660 SSBP4Q9BWG4 385 aaPredicted RBP11.08□□□□□ -0.64
LINC00404-201ENST00000418660 A0A087WWC5 75 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 SNAI2O43623 268 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 IFNA1P01562 189 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 IGHV3-30P01768 117 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 IGHV3-33P01772 117 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 IGHV3-30-3P0DP02 117 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 IGHV3-30-5P0DP03 117 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 AKAP14Q86UN6 197 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 OR10AG1Q8NH19 301 aa11.07□□□□□ -0.64
LINC00404-201ENST00000418660 TRBV10-1A0A0K0K1A3 114 aa11.06□□□□□ -0.64
LINC00404-201ENST00000418660 PDE6DO43924 150 aa11.06□□□□□ -0.64
LINC00404-201ENST00000418660 OR5AL1P0C617 328 aa11.06□□□□□ -0.64
LINC00404-201ENST00000418660 MEF2BQ02080 365 aaPredicted RBP11.06□□□□□ -0.64
LINC00404-201ENST00000418660 CENPWQ5EE01 88 aa11.06□□□□□ -0.64
LINC00404-201ENST00000418660 CDPF1Q6NVV7 123 aa11.06□□□□□ -0.64
LINC00404-201ENST00000418660 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
LINC00404-201ENST00000418660 LRP1BQ9NZR2 4599 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 RAB19A4D1S5 217 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 PSCAO43653 123 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 IGLV2-8P01709 118 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 BCL2P10415 239 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 RAB4BP61018 213 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 RPL36AP83881 106 aaKnown RBP11.04□□□□□ -0.64
LINC00404-201ENST00000418660 LAGE3Q14657 143 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 SPANXN1Q5VSR9 72 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 C9orf62Q8N4C0 152 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 RPL36ALQ969Q0 106 aaKnown RBP11.04□□□□□ -0.64
LINC00404-201ENST00000418660 Q9HAA7 133 aa11.04□□□□□ -0.64
LINC00404-201ENST00000418660 hCG_2014768A0A024R1R8 64 aa11.03□□□□□ -0.64
LINC00404-201ENST00000418660 FUSP35637 526 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00404-201ENST00000418660 TAGLN2P37802 199 aaKnown RBP11.03□□□□□ -0.64
LINC00404-201ENST00000418660 GNG4P50150 75 aa11.03□□□□□ -0.64
LINC00404-201ENST00000418660 DAZAP1Q96EP5 407 aaKnown RBP11.03□□□□□ -0.64
LINC00404-201ENST00000418660 MED9Q9NWA0 146 aa11.03□□□□□ -0.64
LINC00404-201ENST00000418660 VAX2Q9UIW0 290 aa11.03□□□□□ -0.64
LINC00404-201ENST00000418660 TRBV7-3A0A075B6L6 115 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 MUC21A0A0G2JKD1 596 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 MUC21A0A140T8X8 626 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 UBE2D3P61077 147 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 UBE2D2P62837 147 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 ZNF56Q15929 161 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 Q8N3U1 123 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 MAPKAPK5-AS1Q8N8E1 139 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 OR10G8Q8NGN5 311 aa11.02□□□□□ -0.65
LINC00404-201ENST00000418660 C19orf71A6NCJ1 209 aa11.01□□□□□ -0.65
LINC00404-201ENST00000418660 LRCOL1A6NCL2 159 aa11.01□□□□□ -0.65
LINC00404-201ENST00000418660 RPS20P60866 119 aaKnown RBP11.01□□□□□ -0.65
LINC00404-201ENST00000418660 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
LINC00404-201ENST00000418660 TM2D2Q9BX73 214 aa11.01□□□□□ -0.65
LINC00404-201ENST00000418660 TRAV8-3A0A0A6YYJ7 113 aa11□□□□□ -0.65
LINC00404-201ENST00000418660 IGLC6P0CF74 106 aa11□□□□□ -0.65
LINC00404-201ENST00000418660 SSTP61278 116 aa11□□□□□ -0.65
LINC00404-201ENST00000418660 TOR2AQ5JU69 321 aa11□□□□□ -0.65
LINC00404-201ENST00000418660 DAZ4Q86SG3 579 aaKnown RBP11□□□□□ -0.65
LINC00404-201ENST00000418660 NIT1Q86X76 327 aa11□□□□□ -0.65
LINC00404-201ENST00000418660 KRTAP4-5Q9BYR2 181 aa11□□□□□ -0.65
LINC00404-201ENST00000418660 BIN3Q9NQY0 253 aa11□□□□□ -0.65
LINC00404-201ENST00000418660 DAZ3Q9NR90 486 aaKnown RBP11□□□□□ -0.65
LINC00404-201ENST00000418660 HSPG2P98160 4391 aa11□□□□□ -0.65
LINC00404-201ENST00000418660 RYR1P21817 5038 aa10.99□□□□□ -0.65
LINC00404-201ENST00000418660 TRBV20OR9-2A0A075B6H5 130 aa10.99□□□□□ -0.65
LINC00404-201ENST00000418660 GZMBP10144 247 aa10.99□□□□□ -0.65
LINC00404-201ENST00000418660 FER1L6-AS1Q8NA97 138 aa10.99□□□□□ -0.65
LINC00404-201ENST00000418660 NEXN-AS1Q8NBZ9 246 aa10.99□□□□□ -0.65
LINC00404-201ENST00000418660 AP1S3Q96PC3 154 aa10.99□□□□□ -0.65
LINC00404-201ENST00000418660 KIF25-AS1Q9Y6Z4 181 aa10.99□□□□□ -0.65
LINC00404-201ENST00000418660 URGCP-MRPS24S4R325 110 aa10.99□□□□□ -0.65
LINC00404-201ENST00000418660 XKRY2A2RUG3 117 aa10.98□□□□□ -0.65
LINC00404-201ENST00000418660 F5H697 171 aa10.98□□□□□ -0.65
LINC00404-201ENST00000418660 P01737 135 aa10.98□□□□□ -0.65
LINC00404-201ENST00000418660 SMIM17P0DL12 118 aa10.98□□□□□ -0.65
LINC00404-201ENST00000418660 BLOC1S1P78537 153 aa10.98□□□□□ -0.65
LINC00404-201ENST00000418660 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
LINC00404-201ENST00000418660 RBFOX3A6NFN3 312 aa10.97□□□□□ -0.65
LINC00404-201ENST00000418660 CACNG7P62955 275 aa10.97□□□□□ -0.65
LINC00404-201ENST00000418660 ALKAL2Q6UX46 152 aa10.97□□□□□ -0.65
LINC00404-201ENST00000418660 Q8N1X5 172 aa10.97□□□□□ -0.65
LINC00404-201ENST00000418660 NTN5Q8WTR8 489 aaPredicted RBP10.97□□□□□ -0.65
LINC00404-201ENST00000418660 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
LINC00404-201ENST00000418660 DNAH5Q8TE73 4624 aa10.97□□□□□ -0.65
LINC00404-201ENST00000418660 A0A087WX48 190 aa10.96□□□□□ -0.65
LINC00404-201ENST00000418660 TRBV6-8A0A0A6YYG3 113 aa10.96□□□□□ -0.65
LINC00404-201ENST00000418660 F2Z2F3 143 aa10.96□□□□□ -0.65
LINC00404-201ENST00000418660 GCSHP23434 173 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms