RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SCXQ7RTU7 201 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 Q8N976 141 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 DEFB104AQ8WTQ1 72 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 HIST1H2BAQ96A08 127 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 RMI2Q96E14 147 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 KLK12Q9UKR0 248 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 URGCP-MRPS24S4R325 110 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 IGKV2D-24A0A075B6R9 120 aa9.71□□□□□ -0.86
RPS28-201ENST00000417088 A0A087WWL8 130 aa9.71□□□□□ -0.86
RPS28-201ENST00000417088 RBFOX3A6NFN3 312 aa9.71□□□□□ -0.86
RPS28-201ENST00000417088 SH2D1AO60880 128 aa9.71□□□□□ -0.86
RPS28-201ENST00000417088 FAM74A4Q5TZK3 123 aa9.71□□□□□ -0.86
RPS28-201ENST00000417088 OR11H4Q8NGC9 324 aa9.71□□□□□ -0.86
RPS28-201ENST00000417088 SFRP2Q96HF1 295 aa9.71□□□□□ -0.86
RPS28-201ENST00000417088 ZFP30Q9Y2G7 519 aa9.71□□□□□ -0.86
RPS28-201ENST00000417088 LRP1Q07954 4544 aaKnown RBP9.7□□□□□ -0.86
RPS28-201ENST00000417088 BORCS7-ASMTA0A0B4J1R7 106 aa9.7□□□□□ -0.86
RPS28-201ENST00000417088 SEC11BP0C7V7 166 aa9.7□□□□□ -0.86
RPS28-201ENST00000417088 INO80EQ8NBZ0 244 aaPredicted RBP9.7□□□□□ -0.86
RPS28-201ENST00000417088 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
RPS28-201ENST00000417088 NKX6-2Q9C056 277 aaPredicted RBP9.7□□□□□ -0.86
RPS28-201ENST00000417088 M0R381 172 aa9.69□□□□□ -0.86
RPS28-201ENST00000417088 GIPP09681 153 aaPredicted RBP9.69□□□□□ -0.86
RPS28-201ENST00000417088 TPT1P13693 172 aaKnown RBP9.69□□□□□ -0.86
RPS28-201ENST00000417088 FAM162BQ5T6X4 162 aa9.69□□□□□ -0.86
RPS28-201ENST00000417088 CHCHD7Q9BUK0 85 aa9.69□□□□□ -0.86
RPS28-201ENST00000417088 CHAC1Q9BUX1 264 aa9.69□□□□□ -0.86
RPS28-201ENST00000417088 PHLDA3Q9Y5J5 127 aa9.69□□□□□ -0.86
RPS28-201ENST00000417088 A0A087WX48 190 aa9.68□□□□□ -0.86
RPS28-201ENST00000417088 FXYD6-FXYD2A0A087WZ82 144 aa9.68□□□□□ -0.86
RPS28-201ENST00000417088 TMSB15BA0A087X1C1 80 aa9.68□□□□□ -0.86
RPS28-201ENST00000417088 KRTAP10-4P60372 401 aaPredicted RBP9.68□□□□□ -0.86
RPS28-201ENST00000417088 ZNF674Q2M3X9 581 aa9.68□□□□□ -0.86
RPS28-201ENST00000417088 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
RPS28-201ENST00000417088 ATRAIDQ6UW56 229 aa9.68□□□□□ -0.86
RPS28-201ENST00000417088 FMC1Q96HJ9 113 aa9.68□□□□□ -0.86
RPS28-201ENST00000417088 TRBV10-1A0A0K0K1A3 114 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 TRBV6-1A0A0K0K1D8 114 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 PTTG1O95997 202 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 UBE2D3P61077 147 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 UBE2G1P62253 170 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 UBE2D2P62837 147 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 RPL36AP83881 106 aaKnown RBP9.67□□□□□ -0.86
RPS28-201ENST00000417088 ELOBQ15370 118 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 AKR1C8PQ5T2L2 129 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 CIRBP-AS1Q8TBR5 109 aa9.67□□□□□ -0.86
RPS28-201ENST00000417088 RPL36ALQ969Q0 106 aaKnown RBP9.67□□□□□ -0.86
RPS28-201ENST00000417088 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
RPS28-201ENST00000417088 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
RPS28-201ENST00000417088 ZFP82Q8N141 532 aa9.66□□□□□ -0.86
RPS28-201ENST00000417088 FAT3Q8TDW7 4589 aa9.65□□□□□ -0.86
RPS28-201ENST00000417088 MAP1LC3B2A6NCE7 125 aa9.65□□□□□ -0.86
RPS28-201ENST00000417088 LTAP01374 205 aa9.65□□□□□ -0.86
RPS28-201ENST00000417088 Q0VG73 95 aa9.65□□□□□ -0.86
RPS28-201ENST00000417088 KCNIP4Q6PIL6 250 aa9.65□□□□□ -0.86
RPS28-201ENST00000417088 MAP1LC3BQ9GZQ8 125 aa9.65□□□□□ -0.86
RPS28-201ENST00000417088 TRBV6-8A0A0A6YYG3 113 aa9.64□□□□□ -0.87
RPS28-201ENST00000417088 FHITP49789 147 aa9.64□□□□□ -0.87
RPS28-201ENST00000417088 CST9LP1Q5W188 147 aa9.64□□□□□ -0.87
RPS28-201ENST00000417088 ENHOQ6UWT2 76 aa9.64□□□□□ -0.87
RPS28-201ENST00000417088 OR10G8Q8NGN5 311 aa9.64□□□□□ -0.87
RPS28-201ENST00000417088 TCEAL7Q9BRU2 100 aa9.64□□□□□ -0.87
RPS28-201ENST00000417088 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
RPS28-201ENST00000417088 G3V3Q6 166 aa9.63□□□□□ -0.87
RPS28-201ENST00000417088 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
RPS28-201ENST00000417088 CYTL1Q9NRR1 136 aa9.63□□□□□ -0.87
RPS28-201ENST00000417088 IGLV2-8P01709 118 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 AKR1C3P42330 323 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 RAB4BP61018 213 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 C14orf177Q52M58 125 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 MPV17L2Q567V2 206 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 PRR27Q6MZM9 219 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 C15orf54Q8N8G6 183 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 NEXN-AS1Q8NBZ9 246 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 OR10AG1Q8NH19 301 aa9.62□□□□□ -0.87
RPS28-201ENST00000417088 PAGE4O60829 102 aa9.61□□□□□ -0.87
RPS28-201ENST00000417088 RPL19P84098 196 aaKnown RBP9.61□□□□□ -0.87
RPS28-201ENST00000417088 ZNF56Q15929 161 aa9.61□□□□□ -0.87
RPS28-201ENST00000417088 STOML3Q8TAV4 291 aa9.61□□□□□ -0.87
RPS28-201ENST00000417088 OXTP01178 125 aa9.6□□□□□ -0.87
RPS28-201ENST00000417088 CRPP02741 224 aa9.6□□□□□ -0.87
RPS28-201ENST00000417088 ANGP03950 147 aaKnown RBP9.6□□□□□ -0.87
RPS28-201ENST00000417088 SERTAD4-AS1Q5TG53 156 aa9.6□□□□□ -0.87
RPS28-201ENST00000417088 ZNF471Q9BX82 626 aaPredicted RBP9.6□□□□□ -0.87
RPS28-201ENST00000417088 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
RPS28-201ENST00000417088 ARPC5O15511 151 aa9.59□□□□□ -0.87
RPS28-201ENST00000417088 CXCL1P09341 107 aa9.59□□□□□ -0.87
RPS28-201ENST00000417088 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
RPS28-201ENST00000417088 SSBP4Q9BWG4 385 aaPredicted RBP9.59□□□□□ -0.87
RPS28-201ENST00000417088 BATF3Q9NR55 127 aa9.59□□□□□ -0.87
RPS28-201ENST00000417088 MUC21A0A0G2JKD1 596 aa9.58□□□□□ -0.88
RPS28-201ENST00000417088 MUC21A0A140T8X8 626 aa9.58□□□□□ -0.88
RPS28-201ENST00000417088 SNAI2O43623 268 aa9.58□□□□□ -0.88
RPS28-201ENST00000417088 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
RPS28-201ENST00000417088 CHCHD5Q9BSY4 110 aa9.58□□□□□ -0.88
RPS28-201ENST00000417088 PKHD1L1Q86WI1 4243 aa9.58□□□□□ -0.88
RPS28-201ENST00000417088 SCO2A0A1W2PP80 73 aa9.57□□□□□ -0.88
RPS28-201ENST00000417088 S100A9P06702 114 aaKnown RBP9.57□□□□□ -0.88
RPS28-201ENST00000417088 PRSS1P07477 247 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms