RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 KAAG1Q9UBP8 84 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 IGKV1D-37A0A075B6S9 117 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 IGLL5B9A064 214 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 SAA1P0DJI8 122 aaPredicted RBP7.14□□□□□ -1.27
SNHG3-201ENST00000413987 FXYD2P54710 66 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 CEND1Q8N111 149 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 ORMDL3Q8N138 153 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 PRELID3AQ96N28 172 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 CYSLTR1Q9Y271 337 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 F11RQ9Y624 299 aaKnown RBP7.14□□□□□ -1.27
SNHG3-201ENST00000413987 FLNAP21333 2647 aaKnown RBP7.14□□□□□ -1.27
SNHG3-201ENST00000413987 TLN2Q9Y4G6 2542 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 MXRA5Q9NR99 2828 aa7.14□□□□□ -1.27
SNHG3-201ENST00000413987 BEAN1Q3B7T3 259 aa7.13□□□□□ -1.27
SNHG3-201ENST00000413987 TRGV9Q99603 122 aa7.13□□□□□ -1.27
SNHG3-201ENST00000413987 LINC00312Q9Y6C7 94 aa7.13□□□□□ -1.27
SNHG3-201ENST00000413987 IGHV4-61A0A0C4DH41 118 aa7.13□□□□□ -1.27
SNHG3-201ENST00000413987 PLAC8L1A1L4L8 177 aa7.13□□□□□ -1.27
SNHG3-201ENST00000413987 C12orf74Q32Q52 190 aa7.13□□□□□ -1.27
SNHG3-201ENST00000413987 PRNTQ86SH4 94 aa7.13□□□□□ -1.27
SNHG3-201ENST00000413987 ATP6V0E2Q8NHE4 81 aa7.13□□□□□ -1.27
SNHG3-201ENST00000413987 NHP2Q9NX24 153 aaKnown RBP7.13□□□□□ -1.27
SNHG3-201ENST00000413987 RPUSD1Q9UJJ7 312 aaKnown RBP7.13□□□□□ -1.27
SNHG3-201ENST00000413987 OTOGQ6ZRI0 2925 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 SETXQ7Z333 2677 aaKnown RBP7.12□□□□□ -1.27
SNHG3-201ENST00000413987 LOC389332A0A1B0GUA5 103 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 D6R8Y8 96 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 DIAPH2-AS1Q14236 149 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 ETDBQ3ZM63 59 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 FAM104BQ5XKR9 115 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 TMEM14CQ9P0S9 112 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 IGKV1-16P04430 117 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 LINC00694P0DN24 101 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 PAX8Q06710 450 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 LOXL1Q08397 574 aaPredicted RBP7.12□□□□□ -1.27
SNHG3-201ENST00000413987 TMEM155Q4W5P6 130 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 ANKRD29Q8N6D5 301 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 TMEM75Q8N9X5 138 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 TMEM167AQ8TBQ9 72 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 CREBBPQ92793 2442 aa7.12□□□□□ -1.27
SNHG3-201ENST00000413987 LOC107984640A0A0U1RRK4 108 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 IGLV2-11P01706 119 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 COX7A1P24310 79 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 PRRC2AP48634 2157 aaKnown RBP7.11□□□□□ -1.27
SNHG3-201ENST00000413987 LMO4P61968 165 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 KLRD1Q13241 179 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 C10orf105Q8TEF2 133 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 RITA1Q96K30 269 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 LINC00574Q9H8X3 128 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 TRBV25-1A0A075B6N4 114 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 IGHV1-8P0DP01 117 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 DAZ2Q13117 558 aaKnown RBP7.11□□□□□ -1.27
SNHG3-201ENST00000413987 KLF17Q5JT82 389 aaPredicted RBP7.11□□□□□ -1.27
SNHG3-201ENST00000413987 SCGB1D4Q6XE38 83 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 SH2D6Q7Z4S9 175 aa7.11□□□□□ -1.27
SNHG3-201ENST00000413987 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
SNHG3-201ENST00000413987 DAZ1Q9NQZ3 744 aaKnown RBP7.11□□□□□ -1.27
SNHG3-201ENST00000413987 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
SNHG3-201ENST00000413987 CSPG4Q6UVK1 2322 aa7.1□□□□□ -1.27
SNHG3-201ENST00000413987 ACANP16112 2415 aa7.1□□□□□ -1.27
SNHG3-201ENST00000413987 KNCNA6PVL3 124 aa7.1□□□□□ -1.27
SNHG3-201ENST00000413987 H3BMG7 143 aa7.1□□□□□ -1.27
SNHG3-201ENST00000413987 K7ERJ3 54 aa7.1□□□□□ -1.27
SNHG3-201ENST00000413987 IGKCP01834 107 aa7.1□□□□□ -1.27
SNHG3-201ENST00000413987 DKK2Q9UBU2 259 aa7.1□□□□□ -1.27
SNHG3-201ENST00000413987 PRO0461Q9UI25 63 aa7.1□□□□□ -1.27
SNHG3-201ENST00000413987 RBMY1BA6NDE4 496 aaKnown RBP7.09□□□□□ -1.27
SNHG3-201ENST00000413987 RBMY1EA6NEQ0 496 aaKnown RBP7.09□□□□□ -1.27
SNHG3-201ENST00000413987 LINC01546A6NGU7 62 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 APOMO95445 188 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 RBMY1DP0C7P1 496 aaKnown RBP7.09□□□□□ -1.27
SNHG3-201ENST00000413987 RBMY1A1P0DJD3 496 aaKnown RBP7.09□□□□□ -1.27
SNHG3-201ENST00000413987 WT1-ASQ06250 92 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 TWIST1Q15672 202 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 RRN3P1Q2M238 152 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 ZNF833PQ6ZTB9 187 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 LYPD1Q8N2G4 141 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 CARD19Q96LW7 228 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 EDA2RQ9HAV5 297 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 HHLA3Q9XRX5 114 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 MYO9AB2RTY4 2548 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 TRAV8-1A0A0A6YYK1 113 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 WI2-2373I1.2A0A1W2PRP0 233 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 OVOL1O14753 267 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 DPM2O94777 84 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 SPINK8P0C7L1 97 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 CKS2P33552 79 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 FOXI1Q12951 378 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 MRPL51Q4U2R6 128 aaKnown RBP7.09□□□□□ -1.27
SNHG3-201ENST00000413987 Q5XG85 94 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 C18orf15Q96N68 181 aa7.09□□□□□ -1.27
SNHG3-201ENST00000413987 FCER1GP30273 86 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 DAD1P61803 113 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 AMN1Q8IY45 258 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 IGHV3OR16-10A0A075B7F0 116 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 IGHV3-72A0A0B4J1Y9 119 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 NPFFO15130 113 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 PRSS1P07477 247 aa7.08□□□□□ -1.28
SNHG3-201ENST00000413987 ATP5G2Q06055 141 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms