RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PLA2G2CQ5R387 149 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 SND1-IT1Q9HBX3 110 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 TRBV7-3A0A075B6L6 115 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 TRAV1-1A0A0B4J248 108 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 LY6G6CO95867 125 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 UBE2V1Q13404 147 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 HRCT1Q6UXD1 115 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 ZFP2Q6ZN57 461 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 LY96Q9Y6Y9 160 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 IGKV3D-7A0A0C4DH55 119 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 CFPP27918 469 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 H3BMG7 143 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 H3BUA1 57 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 IGKV1-17P01599 117 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 FAM110AQ9BQ89 295 aa8.78□□□□□ -1
PRPF40A-202ENST00000410080 C4orf3Q8WVX3 66 aa8.77□□□□□ -1
PRPF40A-202ENST00000410080 CENPVL3A0A0U1RRI6 287 aa8.77□□□□□ -1
PRPF40A-202ENST00000410080 PPDPFLQ8WWR9 84 aa8.77□□□□□ -1
PRPF40A-202ENST00000410080 ZNF492Q9P255 531 aa8.77□□□□□ -1
PRPF40A-202ENST00000410080 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
PRPF40A-202ENST00000410080 TRBV24-1A0A075B6N3 115 aa8.77□□□□□ -1.01
PRPF40A-202ENST00000410080 CRYGDP07320 174 aa8.77□□□□□ -1.01
PRPF40A-202ENST00000410080 NDUFS6O75380 124 aaKnown RBP8.77□□□□□ -1.01
PRPF40A-202ENST00000410080 C9orf118A6NHY6 69 aa8.77□□□□□ -1.01
PRPF40A-202ENST00000410080 DEFB125Q8N687 156 aa8.77□□□□□ -1.01
PRPF40A-202ENST00000410080 UBE2D3P61077 147 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 WT1-ASQ06250 92 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 DKK2Q9UBU2 259 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 NPYP01303 97 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 INAFM1C9JVW0 142 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 TMEM61Q8N0U2 210 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 SMIM27A0A1W2PRY6 76 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 NPSP0C0P6 89 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 AJUBAQ96IF1 538 aa8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
PRPF40A-202ENST00000410080 HILS1P60008 231 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 SPRNQ5BIV9 151 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 C2orf70A6NJV1 201 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 F8W1H4 67 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 FOXL2NBQ6ZUU3 175 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 A0A0J9YWU9 116 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 SPAG11BQ08648 103 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 C9JQL5 133 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 TMEM14CQ9P0S9 112 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 FAM215AQ9Y5M1 114 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 FXYD5Q96DB9 178 aa8.75□□□□□ -1.01
PRPF40A-202ENST00000410080 MUSTN1Q8IVN3 82 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 RNF152Q8N8N0 203 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 DNAJC9-AS1A6NH13 148 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 HIGD2AQ9BW72 106 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 H3BQ85 93 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 IGHV2-70P01814 119 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 C20orf78Q9BR46 151 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 NAV3Q8IVL0 2385 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 DIRC1Q969H9 104 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 RITA1Q96K30 269 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 SRCAPQ6ZRS2 3230 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 IGLC2P0DOY2 106 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 IGLC3P0DOY3 106 aa8.74□□□□□ -1.01
PRPF40A-202ENST00000410080 IGKV1D-37A0A075B6S9 117 aa8.73□□□□□ -1.01
PRPF40A-202ENST00000410080 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
PRPF40A-202ENST00000410080 ZNF524Q96C55 264 aa8.73□□□□□ -1.01
PRPF40A-202ENST00000410080 SPANXA1Q9NS26 97 aa8.73□□□□□ -1.01
PRPF40A-202ENST00000410080 C5orf56Q8N8D9 126 aa8.73□□□□□ -1.01
PRPF40A-202ENST00000410080 PSMB8P28062 276 aa8.73□□□□□ -1.01
PRPF40A-202ENST00000410080 SPANXDQ9BXN6 97 aa8.73□□□□□ -1.01
PRPF40A-202ENST00000410080 FHL1Q13642 323 aa8.72□□□□□ -1.01
PRPF40A-202ENST00000410080 WT1P19544 449 aaPredicted RBP8.72□□□□□ -1.01
PRPF40A-202ENST00000410080 Q0VG73 95 aa8.72□□□□□ -1.01
PRPF40A-202ENST00000410080 ZNF664Q8N3J9 261 aa8.72□□□□□ -1.01
PRPF40A-202ENST00000410080 DLEU1O43261 78 aa8.72□□□□□ -1.01
PRPF40A-202ENST00000410080 A0A1W2PPM0 123 aa8.72□□□□□ -1.01
PRPF40A-202ENST00000410080 IGLC1P0CG04 106 aa8.71□□□□□ -1.01
PRPF40A-202ENST00000410080 Q8N1Y9 231 aa8.71□□□□□ -1.01
PRPF40A-202ENST00000410080 PIP4P1Q86T03 277 aa8.71□□□□□ -1.01
PRPF40A-202ENST00000410080 LECT2O14960 151 aa8.71□□□□□ -1.01
PRPF40A-202ENST00000410080 TRBV10-2A0A0K0K1G8 114 aa8.71□□□□□ -1.02
PRPF40A-202ENST00000410080 PCP2Q8IVA1 136 aa8.71□□□□□ -1.02
PRPF40A-202ENST00000410080 RBAKDNA6NC62 111 aa8.71□□□□□ -1.02
PRPF40A-202ENST00000410080 TRBV12-3P01733 135 aa8.71□□□□□ -1.02
PRPF40A-202ENST00000410080 COX8AP10176 69 aa8.71□□□□□ -1.02
PRPF40A-202ENST00000410080 GATA1P15976 413 aaPredicted RBP8.71□□□□□ -1.02
PRPF40A-202ENST00000410080 LINC00311Q8N616 119 aa8.71□□□□□ -1.02
PRPF40A-202ENST00000410080 COLCA2A8K830 154 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 ZNF491Q8N8L2 437 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 RETNQ9HD89 108 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 C15orf65H3BRN8 121 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 FOXI1Q12951 378 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 LGALS9BQ3B8N2 356 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 ETDBQ3ZM63 59 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 LGALS9CQ6DKI2 356 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 SPTSSBQ8NFR3 76 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
PRPF40A-202ENST00000410080 PRSS47A8MTI9 375 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms