RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 M0R381 172 aa11.92□□□□□ -0.5
LSM5-204ENST00000409909 C10orf126Q8N4M7 172 aa11.92□□□□□ -0.5
LSM5-204ENST00000409909 RHODO00212 210 aa11.91□□□□□ -0.5
LSM5-204ENST00000409909 RPL35P42766 123 aaKnown RBP11.91□□□□□ -0.5
LSM5-204ENST00000409909 RAB5CP51148 216 aa11.91□□□□□ -0.5
LSM5-204ENST00000409909 ERVFC1-1P60608 527 aa11.91□□□□□ -0.5
LSM5-204ENST00000409909 FAM74A4Q5TZK3 123 aa11.91□□□□□ -0.5
LSM5-204ENST00000409909 DERL1Q9BUN8 251 aa11.91□□□□□ -0.5
LSM5-204ENST00000409909 KRTAP4-5Q9BYR2 181 aa11.91□□□□□ -0.5
LSM5-204ENST00000409909 MANBALQ9NQG1 85 aa11.91□□□□□ -0.5
LSM5-204ENST00000409909 A0A087WTM6 91 aa11.9□□□□□ -0.5
LSM5-204ENST00000409909 IBA57-AS1B1ANH7 110 aa11.9□□□□□ -0.5
LSM5-204ENST00000409909 C1QBP02746 253 aa11.9□□□□□ -0.5
LSM5-204ENST00000409909 SULT1A2P50226 295 aa11.9□□□□□ -0.5
LSM5-204ENST00000409909 EIF5AL1Q6IS14 154 aaKnown RBP11.9□□□□□ -0.5
LSM5-204ENST00000409909 C11orf52Q96A22 123 aa11.9□□□□□ -0.5
LSM5-204ENST00000409909 IGHV3-30P01768 117 aa11.89□□□□□ -0.51
LSM5-204ENST00000409909 IGHV3-33P01772 117 aa11.89□□□□□ -0.51
LSM5-204ENST00000409909 IGHV3-30-3P0DP02 117 aa11.89□□□□□ -0.51
LSM5-204ENST00000409909 IGHV3-30-5P0DP03 117 aa11.89□□□□□ -0.51
LSM5-204ENST00000409909 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
LSM5-204ENST00000409909 ZFP82Q8N141 532 aa11.89□□□□□ -0.51
LSM5-204ENST00000409909 Q8N3U1 123 aa11.89□□□□□ -0.51
LSM5-204ENST00000409909 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
LSM5-204ENST00000409909 EREGO14944 169 aa11.88□□□□□ -0.51
LSM5-204ENST00000409909 CXCL1P09341 107 aa11.88□□□□□ -0.51
LSM5-204ENST00000409909 OR10AG1Q8NH19 301 aa11.88□□□□□ -0.51
LSM5-204ENST00000409909 SLC51BQ86UW2 128 aa11.87□□□□□ -0.51
LSM5-204ENST00000409909 SSBP4Q9BWG4 385 aaPredicted RBP11.87□□□□□ -0.51
LSM5-204ENST00000409909 BOLA1Q9Y3E2 137 aa11.87□□□□□ -0.51
LSM5-204ENST00000409909 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
LSM5-204ENST00000409909 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
LSM5-204ENST00000409909 SNAI2O43623 268 aa11.86□□□□□ -0.51
LSM5-204ENST00000409909 IGLV2-8P01709 118 aa11.86□□□□□ -0.51
LSM5-204ENST00000409909 RAB19A4D1S5 217 aa11.85□□□□□ -0.51
LSM5-204ENST00000409909 TEX46H3BTG2 121 aa11.85□□□□□ -0.51
LSM5-204ENST00000409909 CENPWQ5EE01 88 aa11.85□□□□□ -0.51
LSM5-204ENST00000409909 Q9HAA7 133 aa11.85□□□□□ -0.51
LSM5-204ENST00000409909 hCG_2014768A0A024R1R8 64 aa11.84□□□□□ -0.51
LSM5-204ENST00000409909 LRCOL1A6NCL2 159 aa11.84□□□□□ -0.51
LSM5-204ENST00000409909 OR5AL1P0C617 328 aa11.84□□□□□ -0.51
LSM5-204ENST00000409909 MEF2BQ02080 365 aaPredicted RBP11.84□□□□□ -0.51
LSM5-204ENST00000409909 CDPF1Q6NVV7 123 aa11.84□□□□□ -0.51
LSM5-204ENST00000409909 C9orf62Q8N4C0 152 aa11.84□□□□□ -0.51
LSM5-204ENST00000409909 MAPKAPK5-AS1Q8N8E1 139 aa11.84□□□□□ -0.51
LSM5-204ENST00000409909 A0A087WWC5 75 aa11.83□□□□□ -0.52
LSM5-204ENST00000409909 AKAP14Q86UN6 197 aa11.83□□□□□ -0.52
LSM5-204ENST00000409909 TRBV20OR9-2A0A075B6H5 130 aa11.82□□□□□ -0.52
LSM5-204ENST00000409909 TRBV10-1A0A0K0K1A3 114 aa11.82□□□□□ -0.52
LSM5-204ENST00000409909 PSCAO43653 123 aa11.82□□□□□ -0.52
LSM5-204ENST00000409909 PDE6DO43924 150 aa11.82□□□□□ -0.52
LSM5-204ENST00000409909 BCL2P10415 239 aa11.82□□□□□ -0.52
LSM5-204ENST00000409909 RAB4BP61018 213 aa11.82□□□□□ -0.52
LSM5-204ENST00000409909 SSTP61278 116 aa11.82□□□□□ -0.52
LSM5-204ENST00000409909 DAZ4Q86SG3 579 aaKnown RBP11.82□□□□□ -0.52
LSM5-204ENST00000409909 DAZ3Q9NR90 486 aaKnown RBP11.82□□□□□ -0.52
LSM5-204ENST00000409909 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 IFNA1P01562 189 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 GZMBP10144 247 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 GNG4P50150 75 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 UBE2D3P61077 147 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 UBE2D2P62837 147 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 LAGE3Q14657 143 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 SPANXN1Q5VSR9 72 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 MED9Q9NWA0 146 aa11.81□□□□□ -0.52
LSM5-204ENST00000409909 TRBV7-3A0A075B6L6 115 aa11.8□□□□□ -0.52
LSM5-204ENST00000409909 KRTAP10-1P60331 282 aa11.8□□□□□ -0.52
LSM5-204ENST00000409909 RPL36AP83881 106 aaKnown RBP11.8□□□□□ -0.52
LSM5-204ENST00000409909 OR10G8Q8NGN5 311 aa11.8□□□□□ -0.52
LSM5-204ENST00000409909 RPL36ALQ969Q0 106 aaKnown RBP11.8□□□□□ -0.52
LSM5-204ENST00000409909 VAX2Q9UIW0 290 aa11.8□□□□□ -0.52
LSM5-204ENST00000409909 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
LSM5-204ENST00000409909 RBFOX3A6NFN3 312 aa11.79□□□□□ -0.52
LSM5-204ENST00000409909 IGLC6P0CF74 106 aa11.79□□□□□ -0.52
LSM5-204ENST00000409909 ZNF56Q15929 161 aa11.79□□□□□ -0.52
LSM5-204ENST00000409909 NIT1Q86X76 327 aa11.79□□□□□ -0.52
LSM5-204ENST00000409909 Q8N1X5 172 aa11.79□□□□□ -0.52
LSM5-204ENST00000409909 NEXN-AS1Q8NBZ9 246 aa11.79□□□□□ -0.52
LSM5-204ENST00000409909 OR2D3Q8NGH3 330 aa11.79□□□□□ -0.52
LSM5-204ENST00000409909 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
LSM5-204ENST00000409909 DAZAP1Q96EP5 407 aaKnown RBP11.78□□□□□ -0.52
LSM5-204ENST00000409909 FAT1Q14517 4588 aa11.77□□□□□ -0.52
LSM5-204ENST00000409909 XGP55808 180 aa11.77□□□□□ -0.53
LSM5-204ENST00000409909 FER1L6-AS1Q8NA97 138 aa11.77□□□□□ -0.53
LSM5-204ENST00000409909 DNAJC30Q96LL9 226 aa11.77□□□□□ -0.53
LSM5-204ENST00000409909 TPPP3Q9BW30 176 aa11.77□□□□□ -0.53
LSM5-204ENST00000409909 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
LSM5-204ENST00000409909 F5H697 171 aa11.76□□□□□ -0.53
LSM5-204ENST00000409909 RPS20P60866 119 aaKnown RBP11.76□□□□□ -0.53
LSM5-204ENST00000409909 WFDC2Q14508 124 aa11.76□□□□□ -0.53
LSM5-204ENST00000409909 ALKAL2Q6UX46 152 aa11.76□□□□□ -0.53
LSM5-204ENST00000409909 Q8N814 137 aa11.76□□□□□ -0.53
LSM5-204ENST00000409909 TM2D2Q9BX73 214 aa11.76□□□□□ -0.53
LSM5-204ENST00000409909 P01737 135 aa11.75□□□□□ -0.53
LSM5-204ENST00000409909 GCSHP23434 173 aa11.75□□□□□ -0.53
LSM5-204ENST00000409909 TAGLN2P37802 199 aaKnown RBP11.75□□□□□ -0.53
LSM5-204ENST00000409909 AP1S3Q96PC3 154 aa11.75□□□□□ -0.53
LSM5-204ENST00000409909 URGCP-MRPS24S4R325 110 aa11.75□□□□□ -0.53
LSM5-204ENST00000409909 TRBV6-8A0A0A6YYG3 113 aa11.74□□□□□ -0.53
LSM5-204ENST00000409909 TOR2AQ5JU69 321 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms