RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 HTN1P15515 57 aa15.26■□□□□ 0.03
USP39-203ENST00000409470 PROK1P58294 105 aa15.26■□□□□ 0.03
USP39-203ENST00000409470 C20orf78Q9BR46 151 aa15.26■□□□□ 0.03
USP39-203ENST00000409470 A0A087WWL8 130 aa15.25■□□□□ 0.03
USP39-203ENST00000409470 NSUN5P1Q3KNT7 163 aa15.25■□□□□ 0.03
USP39-203ENST00000409470 PPP1R17O96001 155 aa15.24■□□□□ 0.03
USP39-203ENST00000409470 POM121L12Q8N7R1 296 aa15.24■□□□□ 0.03
USP39-203ENST00000409470 LINC00315P59091 139 aa15.24■□□□□ 0.03
USP39-203ENST00000409470 Q6ZN92 141 aa15.24■□□□□ 0.03
USP39-203ENST00000409470 F5H697 171 aa15.23■□□□□ 0.03
USP39-203ENST00000409470 LGALS9BQ3B8N2 356 aa15.23■□□□□ 0.03
USP39-203ENST00000409470 ODF3L2Q3SX64 289 aa15.23■□□□□ 0.03
USP39-203ENST00000409470 LGALS9CQ6DKI2 356 aa15.23■□□□□ 0.03
USP39-203ENST00000409470 ST20Q9HBF5 79 aa15.23■□□□□ 0.03
USP39-203ENST00000409470 GOLT1BQ9Y3E0 138 aa15.23■□□□□ 0.03
USP39-203ENST00000409470 M0R143 59 aa15.22■□□□□ 0.03
USP39-203ENST00000409470 EREGO14944 169 aa15.22■□□□□ 0.03
USP39-203ENST00000409470 SAP30O75446 220 aa15.22■□□□□ 0.03
USP39-203ENST00000409470 FAM74A4Q5TZK3 123 aa15.22■□□□□ 0.03
USP39-203ENST00000409470 INAFM1C9JVW0 142 aa15.22■□□□□ 0.03
USP39-203ENST00000409470 SNHG12Q9BXW3 62 aa15.22■□□□□ 0.03
USP39-203ENST00000409470 NUDT3O95989 172 aa15.21■□□□□ 0.03
USP39-203ENST00000409470 HNRNPA3P51991 378 aaKnown RBP15.21■□□□□ 0.03
USP39-203ENST00000409470 ZNF876PQ49A33 203 aa15.21■□□□□ 0.03
USP39-203ENST00000409470 SUMO4Q6EEV6 95 aa15.21■□□□□ 0.03
USP39-203ENST00000409470 ADARB2-AS1A8MUL3 147 aa15.21■□□□□ 0.02
USP39-203ENST00000409470 OR11H12B2RN74 326 aa15.21■□□□□ 0.02
USP39-203ENST00000409470 LBHQ53QV2 105 aaPredicted RBP15.21■□□□□ 0.02
USP39-203ENST00000409470 STHQ8IWL8 128 aa15.2■□□□□ 0.02
USP39-203ENST00000409470 OTOGQ6ZRI0 2925 aa15.19■□□□□ 0.02
USP39-203ENST00000409470 ORMDL2Q53FV1 153 aa15.19■□□□□ 0.02
USP39-203ENST00000409470 PRSS1P07477 247 aa15.19■□□□□ 0.02
USP39-203ENST00000409470 ZNF56Q15929 161 aa15.19■□□□□ 0.02
USP39-203ENST00000409470 CSTL1Q9H114 145 aa15.19■□□□□ 0.02
USP39-203ENST00000409470 ATP5LO75964 103 aa15.18■□□□□ 0.02
USP39-203ENST00000409470 INSP01308 110 aa15.18■□□□□ 0.02
USP39-203ENST00000409470 LINC01587Q99440 93 aa15.18■□□□□ 0.02
USP39-203ENST00000409470 C2orf88Q9BSF0 95 aa15.18■□□□□ 0.02
USP39-203ENST00000409470 K7EMI3 77 aa15.17■□□□□ 0.02
USP39-203ENST00000409470 MRPL52Q86TS9 123 aaKnown RBP15.17■□□□□ 0.02
USP39-203ENST00000409470 CLUHP3Q96NS8 147 aa15.17■□□□□ 0.02
USP39-203ENST00000409470 CRYGDP07320 174 aa15.17■□□□□ 0.02
USP39-203ENST00000409470 PRM2P04554 102 aa15.16■□□□□ 0.02
USP39-203ENST00000409470 SETXQ7Z333 2677 aaKnown RBP15.16■□□□□ 0.02
USP39-203ENST00000409470 ZNF415Q09FC8 603 aa15.16■□□□□ 0.02
USP39-203ENST00000409470 DKK2Q9UBU2 259 aa15.16■□□□□ 0.02
USP39-203ENST00000409470 KRTAP10-3P60369 221 aa15.15■□□□□ 0.02
USP39-203ENST00000409470 NEGR1Q7Z3B1 354 aa15.15■□□□□ 0.02
USP39-203ENST00000409470 NDUFA11Q86Y39 141 aa15.15■□□□□ 0.02
USP39-203ENST00000409470 XCL2Q9UBD3 114 aa15.15■□□□□ 0.02
USP39-203ENST00000409470 CMC4P56277 68 aaPredicted RBP15.14■□□□□ 0.01
USP39-203ENST00000409470 IGLV1-51P01701 117 aa15.14■□□□□ 0.01
USP39-203ENST00000409470 BATFQ16520 125 aa15.14■□□□□ 0.01
USP39-203ENST00000409470 TRPT1Q86TN4 253 aaKnown RBP15.14■□□□□ 0.01
USP39-203ENST00000409470 RPL32P62910 135 aaKnown RBP15.13■□□□□ 0.01
USP39-203ENST00000409470 ODF1Q14990 250 aa15.13■□□□□ 0.01
USP39-203ENST00000409470 SLC25A34Q6PIV7 304 aa15.13■□□□□ 0.01
USP39-203ENST00000409470 TMEM208Q9BTX3 173 aa15.13■□□□□ 0.01
USP39-203ENST00000409470 M0R2P5 195 aa15.12■□□□□ 0.01
USP39-203ENST00000409470 TOMM6Q96B49 74 aa15.12■□□□□ 0.01
USP39-203ENST00000409470 LINC00467Q9BRT7 94 aa15.12■□□□□ 0.01
USP39-203ENST00000409470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.12■□□□□ 0.01
USP39-203ENST00000409470 VCYO14598 125 aa15.12■□□□□ 0.01
USP39-203ENST00000409470 PF4P02776 101 aa15.12■□□□□ 0.01
USP39-203ENST00000409470 POLR2KP53803 58 aaKnown RBP15.12■□□□□ 0.01
USP39-203ENST00000409470 NUTF2P61970 127 aaKnown RBP15.12■□□□□ 0.01
USP39-203ENST00000409470 MRPS16Q9Y3D3 137 aaKnown RBP15.12■□□□□ 0.01
USP39-203ENST00000409470 A0A1B0GV90 55 aa15.11■□□□□ 0.01
USP39-203ENST00000409470 M0QY20 66 aa15.11■□□□□ 0.01
USP39-203ENST00000409470 STPG4Q8N801 248 aa15.11■□□□□ 0.01
USP39-203ENST00000409470 SCGB3A1Q96QR1 104 aa15.11■□□□□ 0.01
USP39-203ENST00000409470 TP73-AS1Q9UF72 201 aa15.11■□□□□ 0.01
USP39-203ENST00000409470 SDHAF1A6NFY7 115 aa15.1■□□□□ 0.01
USP39-203ENST00000409470 C2orf66Q6UXQ4 117 aa15.1■□□□□ 0.01
USP39-203ENST00000409470 KIR2DL4Q99706 377 aa15.1■□□□□ 0.01
USP39-203ENST00000409470 TRBV6-5A0A0K0K1A5 114 aa15.1■□□□□ 0.01
USP39-203ENST00000409470 FOSL1P15407 271 aa15.1■□□□□ 0.01
USP39-203ENST00000409470 ANKRD39Q53RE8 183 aa15.1■□□□□ 0.01
USP39-203ENST00000409470 IGHV3OR16-12A0A075B7B8 117 aa15.09■□□□□ 0.01
USP39-203ENST00000409470 DEFB104AQ8WTQ1 72 aa15.09■□□□□ 0.01
USP39-203ENST00000409470 A8MWV9 139 aa15.08■□□□□ 0
USP39-203ENST00000409470 IGKCP01834 107 aa15.08■□□□□ 0
USP39-203ENST00000409470 COX8AP10176 69 aa15.08■□□□□ 0
USP39-203ENST00000409470 TCTAP57738 103 aa15.08■□□□□ 0
USP39-203ENST00000409470 MORN3Q6PF18 240 aaPredicted RBP15.08■□□□□ 0
USP39-203ENST00000409470 C11orf72Q8NBR9 251 aa15.08■□□□□ 0
USP39-203ENST00000409470 IGHV3-73A0A0B4J1V6 119 aa15.07■□□□□ 0
USP39-203ENST00000409470 G0S2P27469 103 aa15.07■□□□□ 0
USP39-203ENST00000409470 ZMAT4Q9H898 229 aa15.07■□□□□ 0
USP39-203ENST00000409470 DPM2O94777 84 aa15.07■□□□□ 0
USP39-203ENST00000409470 BEAN1Q3B7T3 259 aa15.07■□□□□ 0
USP39-203ENST00000409470 PIK3CD-AS1Q5SR53 167 aa15.07■□□□□ 0
USP39-203ENST00000409470 ZFP2Q6ZN57 461 aa15.07■□□□□ 0
USP39-203ENST00000409470 C1orf158Q8N1D5 194 aa15.07■□□□□ 0
USP39-203ENST00000409470 SPXQ9BT56 116 aa15.07■□□□□ 0
USP39-203ENST00000409470 A0A087WX48 190 aa15.06■□□□□ 0
USP39-203ENST00000409470 TRBV27A0A0K0K1C4 114 aa15.06■□□□□ 0
USP39-203ENST00000409470 PTH2Q96A98 100 aa15.06■□□□□ 0
USP39-203ENST00000409470 FAM110AQ9BQ89 295 aa15.06■□□□□ 0
USP39-203ENST00000409470 WFDC10AQ9H1F0 79 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms