RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 PATE1Q8WXA2 126 aa1.11□□□□□ -2.23
PTPN12-202ENST00000407343 TMEM141Q96I45 108 aa1.11□□□□□ -2.23
PTPN12-202ENST00000407343 LINC00052Q96N35 136 aa1.11□□□□□ -2.23
PTPN12-202ENST00000407343 PPIP5K1Q6PFW1 1433 aa1.11□□□□□ -2.23
PTPN12-202ENST00000407343 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.11□□□□□ -2.23
PTPN12-202ENST00000407343 CECR2Q9BXF3 1484 aa1.11□□□□□ -2.23
PTPN12-202ENST00000407343 LRP5O75197 1615 aa1.11□□□□□ -2.23
PTPN12-202ENST00000407343 FREM3P0C091 2139 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 LAMA4Q16363 1823 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 CASKIN1Q8WXD9 1431 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 TRAV17A0A0B4J275 112 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 CXorf51AA0A1B0GTR3 108 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 RBAKDNA6NC62 111 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 F8W1H4 67 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 CCL16O15467 120 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 IGHV3-33P01772 117 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 MT-ATP8P03928 68 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 SLC25A6P12236 298 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 PIPP12273 146 aaPredicted RBP1.1□□□□□ -2.23
PTPN12-202ENST00000407343 UBE2G1P62253 170 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 RBM3P98179 157 aaKnown RBP1.1□□□□□ -2.23
PTPN12-202ENST00000407343 S100A7L2Q5SY68 101 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 C12orf73Q69YU5 71 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 CSAG1Q6PB30 78 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 SBSPONQ8IVN8 264 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 C4orf33Q8N1A6 199 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 OR10AG1Q8NH19 301 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 AQP10Q96PS8 301 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 DPH3P1Q9H4G8 78 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 CDC42SE1Q9NRR8 79 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 FAIMQ9NVQ4 179 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 LINC00312Q9Y6C7 94 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 V9GYS6 101 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 CASZ1Q86V15 1759 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 ROBO1Q9Y6N7 1651 aa1.1□□□□□ -2.23
PTPN12-202ENST00000407343 SPHKAPQ2M3C7 1700 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 AKAP12Q02952 1782 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 C10orf71Q711Q0 1435 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 MYH9P35579 1960 aaKnown RBP1.09□□□□□ -2.23
PTPN12-202ENST00000407343 FAM24AA6NFZ4 105 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 IGKCP01834 107 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 TFF1P04155 84 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 IL7P13232 177 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 COX7CP15954 63 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 POLR2JP52435 117 aaKnown RBP1.09□□□□□ -2.23
PTPN12-202ENST00000407343 UBA52P62987 128 aaKnown RBP1.09□□□□□ -2.23
PTPN12-202ENST00000407343 RHOHQ15669 191 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 SPRNQ5BIV9 151 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 C9orf116Q5BN46 136 aaPredicted RBP1.09□□□□□ -2.23
PTPN12-202ENST00000407343 SLC48A1Q6P1K1 146 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 LYPD5Q6UWN5 251 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 C5orf38Q86SI9 138 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 ZNF431Q8TF32 576 aaPredicted RBP1.09□□□□□ -2.23
PTPN12-202ENST00000407343 PPDPFLQ8WWR9 84 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 DPY30Q9C005 99 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 ORMDL1Q9P0S3 153 aa1.09□□□□□ -2.23
PTPN12-202ENST00000407343 MED14O60244 1454 aa1.09□□□□□ -2.24
PTPN12-202ENST00000407343 TEX14Q8IWB6 1497 aa1.09□□□□□ -2.24
PTPN12-202ENST00000407343 ANKRD26Q9UPS8 1709 aa1.09□□□□□ -2.24
PTPN12-202ENST00000407343 ABCC5O15440 1437 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 DAPK1P53355 1430 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 CPSF1Q10570 1443 aaKnown RBP1.08□□□□□ -2.24
PTPN12-202ENST00000407343 MAGI1Q96QZ7 1491 aaPredicted RBP1.08□□□□□ -2.24
PTPN12-202ENST00000407343 IFT140Q96RY7 1462 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 CBLN1P23435 193 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 C4orf3Q8WVX3 66 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 LIMD2Q9BT23 127 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 Q9H521 79 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 SCP2D1Q9UJQ7 156 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 ARHGAP5Q13017 1502 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 EML5Q05BV3 1969 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 CITO14578 2027 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 KIAA1549LQ6ZVL6 1849 aa1.08□□□□□ -2.24
PTPN12-202ENST00000407343 CC2D2AQ9P2K1 1620 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 PLXNA4Q9HCM2 1894 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 NSD3Q9BZ95 1437 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 PRDM2Q13029 1718 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 UBE2L5PA0A1B0GUS4 154 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 TRBV6-4A0A1B0GX49 114 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 TMEM30CPA0ZSE6 113 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 NUPR2A6NF83 97 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 H3BRM9 83 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 SSSCA1O60232 199 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 CCKP06307 115 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 IGLC1P0CG04 106 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 SNCAP37840 140 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 UBE2L3P68036 154 aaKnown RBP1.07□□□□□ -2.24
PTPN12-202ENST00000407343 DCDP81605 110 aaKnown RBP1.07□□□□□ -2.24
PTPN12-202ENST00000407343 IQCJQ1A5X6 159 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 PYY3Q5JQD4 70 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 COMMD6Q7Z4G1 85 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 SPTSSBQ8NFR3 76 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 C10orf82Q8WW14 230 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 VAMP8Q9BV40 100 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 PRO1933Q9H354 126 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 LINC00474Q9P2X8 69 aa1.07□□□□□ -2.24
PTPN12-202ENST00000407343 FYCO1Q9BQS8 1478 aa1.06□□□□□ -2.24
PTPN12-202ENST00000407343 RBBP6Q7Z6E9 1792 aaKnown RBP1.06□□□□□ -2.24
PTPN12-202ENST00000407343 TRPM7Q96QT4 1865 aa1.06□□□□□ -2.24
PTPN12-202ENST00000407343 A0A0J9YY99 117 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms