RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 RHODO00212 210 aa12.33□□□□□ -0.44
PTPRN2-204ENST00000404321 PDE6DO43924 150 aa12.33□□□□□ -0.44
PTPRN2-204ENST00000404321 EVI2AP22794 236 aa12.33□□□□□ -0.44
PTPRN2-204ENST00000404321 GNG4P50150 75 aa12.33□□□□□ -0.44
PTPRN2-204ENST00000404321 OR10J3Q5JRS4 329 aa12.33□□□□□ -0.44
PTPRN2-204ENST00000404321 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
PTPRN2-204ENST00000404321 TRAV9-2A0A087WT02 112 aa12.32□□□□□ -0.44
PTPRN2-204ENST00000404321 IGLV2-8P01709 118 aa12.32□□□□□ -0.44
PTPRN2-204ENST00000404321 CRYGDP07320 174 aa12.32□□□□□ -0.44
PTPRN2-204ENST00000404321 DNAH10OSP0CZ25 163 aa12.32□□□□□ -0.44
PTPRN2-204ENST00000404321 TIRAPP58753 221 aa12.32□□□□□ -0.44
PTPRN2-204ENST00000404321 TRBV20OR9-2A0A075B6H5 130 aa12.31□□□□□ -0.44
PTPRN2-204ENST00000404321 MED14OSP0DP75 135 aa12.31□□□□□ -0.44
PTPRN2-204ENST00000404321 Q6ZRN7 208 aaPredicted RBP12.31□□□□□ -0.44
PTPRN2-204ENST00000404321 GTSF1LQ9H1H1 148 aa12.31□□□□□ -0.44
PTPRN2-204ENST00000404321 TRAV8-6A0A0B4J262 113 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 IGHV3-38A0A0C4DH36 116 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 CXCL1P09341 107 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 GZMBP10144 247 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 BTF3P20290 206 aaKnown RBP12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 DAZAP1Q96EP5 407 aaKnown RBP12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 MSRB1Q9NZV6 116 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 C16orf90A8MZG2 172 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 IGHV3-30-3P0DP02 117 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 LELP1Q5T871 98 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 SPANXN1Q5VSR9 72 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 SPATA12Q7Z6I5 190 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 OR2D3Q8NGH3 330 aa12.3□□□□□ -0.44
PTPRN2-204ENST00000404321 SNAI2O43623 268 aa12.29□□□□□ -0.44
PTPRN2-204ENST00000404321 BLOC1S1P78537 153 aa12.29□□□□□ -0.44
PTPRN2-204ENST00000404321 RBFOX3A6NFN3 312 aa12.28□□□□□ -0.44
PTPRN2-204ENST00000404321 SSBP4Q9BWG4 385 aaPredicted RBP12.28□□□□□ -0.44
PTPRN2-204ENST00000404321 C19orf71A6NCJ1 209 aa12.27□□□□□ -0.45
PTPRN2-204ENST00000404321 OR5AL1P0C617 328 aa12.27□□□□□ -0.45
PTPRN2-204ENST00000404321 TAGLN2P37802 199 aaKnown RBP12.27□□□□□ -0.45
PTPRN2-204ENST00000404321 KRTAP10-2P60368 255 aa12.27□□□□□ -0.45
PTPRN2-204ENST00000404321 ZNF56Q15929 161 aa12.27□□□□□ -0.45
PTPRN2-204ENST00000404321 LINC01556Q5JQF7 62 aa12.27□□□□□ -0.45
PTPRN2-204ENST00000404321 Q8N3U1 123 aa12.27□□□□□ -0.45
PTPRN2-204ENST00000404321 P01737 135 aa12.26□□□□□ -0.45
PTPRN2-204ENST00000404321 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
PTPRN2-204ENST00000404321 C10orf126Q8N4M7 172 aa12.26□□□□□ -0.45
PTPRN2-204ENST00000404321 SMIM12Q96EX1 92 aa12.26□□□□□ -0.45
PTPRN2-204ENST00000404321 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■■□ 20.7
PTPRN2-204ENST00000404321 FER1L6-AS1Q8NA97 138 aa12.25□□□□□ -0.45
PTPRN2-204ENST00000404321 F5H697 171 aa12.24□□□□□ -0.45
PTPRN2-204ENST00000404321 K7EP13 123 aa12.24□□□□□ -0.45
PTPRN2-204ENST00000404321 CEBPGP53567 150 aa12.24□□□□□ -0.45
PTPRN2-204ENST00000404321 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
PTPRN2-204ENST00000404321 Q9HAA7 133 aa12.24□□□□□ -0.45
PTPRN2-204ENST00000404321 RYR1P21817 5038 aa12.23□□□□□ -0.45
PTPRN2-204ENST00000404321 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
PTPRN2-204ENST00000404321 RPL36AP83881 106 aaKnown RBP12.23□□□□□ -0.45
PTPRN2-204ENST00000404321 TOR2AQ5JU69 321 aa12.23□□□□□ -0.45
PTPRN2-204ENST00000404321 RPL36ALQ969Q0 106 aaKnown RBP12.23□□□□□ -0.45
PTPRN2-204ENST00000404321 K7EN84 100 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 ERVFC1-1P60608 527 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 RAB4BP61018 213 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 NUDT10Q8NFP7 164 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 LYPD6BQ8NI32 183 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 OCC1Q8TAD7 63 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 AP1S3Q96PC3 154 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 RNASE7Q9H1E1 156 aaKnown RBP12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 BIN3Q9NQY0 253 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 LRP1BQ9NZR2 4599 aa12.22□□□□□ -0.45
PTPRN2-204ENST00000404321 TRBV10-1A0A0K0K1A3 114 aa12.21□□□□□ -0.45
PTPRN2-204ENST00000404321 IBA57-AS1B1ANH7 110 aa12.21□□□□□ -0.45
PTPRN2-204ENST00000404321 SMIM17P0DL12 118 aa12.21□□□□□ -0.45
PTPRN2-204ENST00000404321 TRBV7-3A0A075B6L6 115 aa12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 A0A087WWC5 75 aa12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 XKRY2A2RUG3 117 aa12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 MGPP08493 103 aa12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 UBE2D3P61077 147 aa12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 UBE2D2P62837 147 aa12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 NEXN-AS1Q8NBZ9 246 aa12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 EIF5A2Q9GZV4 153 aaKnown RBP12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
PTPRN2-204ENST00000404321 A0A087WTM6 91 aa12.19□□□□□ -0.46
PTPRN2-204ENST00000404321 TMEM250H0YL14 139 aa12.19□□□□□ -0.46
PTPRN2-204ENST00000404321 EREGO14944 169 aa12.19□□□□□ -0.46
PTPRN2-204ENST00000404321 PSCAO43653 123 aa12.19□□□□□ -0.46
PTPRN2-204ENST00000404321 LYZL1Q6UWQ5 148 aa12.19□□□□□ -0.46
PTPRN2-204ENST00000404321 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-204ENST00000404321 RPP21Q9H633 154 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-204ENST00000404321 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-204ENST00000404321 CACNG7P62955 275 aa12.18□□□□□ -0.46
PTPRN2-204ENST00000404321 OR10G8Q8NGN5 311 aa12.18□□□□□ -0.46
PTPRN2-204ENST00000404321 DNAH5Q8TE73 4624 aa12.17□□□□□ -0.46
PTPRN2-204ENST00000404321 F2Z2F3 143 aa12.17□□□□□ -0.46
PTPRN2-204ENST00000404321 NIT1Q86X76 327 aa12.16□□□□□ -0.46
PTPRN2-204ENST00000404321 FAM210AQ96ND0 272 aa12.16□□□□□ -0.46
PTPRN2-204ENST00000404321 URGCP-MRPS24S4R325 110 aa12.16□□□□□ -0.46
PTPRN2-204ENST00000404321 NTF3P20783 257 aa12.15□□□□□ -0.46
PTPRN2-204ENST00000404321 SUMO4Q6EEV6 95 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms