RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMEM262E9PQX1 116 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 C17orf112F2Z3M2 114 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 H3BVH4 76 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 CRIP1P50238 77 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 TAS2R45P59539 299 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 SMUG1Q53HV7 270 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 FAM74A1Q5RGS3 127 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 FAM74A4Q5TZK3 123 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 CLPSL2Q6UWE3 100 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 NTM-AS1Q6ZSK4 140 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 PRR34Q9NV39 138 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 IL36BQ9NZH7 164 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 ANGP03950 147 aaKnown RBP7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 CNBPP62633 177 aaKnown RBP7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 FLI1Q01543 452 aaPredicted RBP7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 LRRC37A5PQ49AS3 106 aa7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 PQLC2Q6ZP29 291 aa7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 SUN5Q8TC36 379 aa7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 SFRP2Q96HF1 295 aa7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 NDFIP1Q9BT67 221 aa7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 SMIM3Q9BZL3 60 aa7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 PLAC8Q9NZF1 115 aa7.45□□□□□ -1.22
SPTLC1P3-201ENST00000403408 TRAV34A0A0B4J273 112 aa7.44□□□□□ -1.22
SPTLC1P3-201ENST00000403408 GRIFINA4D1Z8 144 aa7.44□□□□□ -1.22
SPTLC1P3-201ENST00000403408 H2AFB2P0C5Z0 115 aa7.44□□□□□ -1.22
SPTLC1P3-201ENST00000403408 ARMS2P0C7Q2 107 aa7.44□□□□□ -1.22
SPTLC1P3-201ENST00000403408 ARL14EPLP0DKL9 152 aa7.44□□□□□ -1.22
SPTLC1P3-201ENST00000403408 S100A4P26447 101 aaKnown RBP7.44□□□□□ -1.22
SPTLC1P3-201ENST00000403408 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
SPTLC1P3-201ENST00000403408 TRBV7-3A0A075B6L6 115 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 SCO2A0A1W2PP80 73 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 KRBOX1C9JBD0 128 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 RHODO00212 210 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 CRPP02741 224 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 MIAQ16674 131 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 DNLZQ5SXM8 178 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 WDR73Q6P4I2 378 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 C5orf17Q8NAS9 161 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 NEXN-AS1Q8NBZ9 246 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 OR10G8Q8NGN5 311 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 EPDR1Q9UM22 224 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 HSPB11Q9Y547 144 aa7.43□□□□□ -1.22
SPTLC1P3-201ENST00000403408 TRBV10-1A0A0K0K1A3 114 aa7.42□□□□□ -1.22
SPTLC1P3-201ENST00000403408 SERTM2A0A1B0GWG4 89 aa7.42□□□□□ -1.22
SPTLC1P3-201ENST00000403408 RBX1P62877 108 aa7.42□□□□□ -1.22
SPTLC1P3-201ENST00000403408 SUMO1P63165 101 aaKnown RBP7.42□□□□□ -1.22
SPTLC1P3-201ENST00000403408 KCNIP4Q6PIL6 250 aa7.42□□□□□ -1.22
SPTLC1P3-201ENST00000403408 LINC00269Q8N2A0 174 aa7.42□□□□□ -1.22
SPTLC1P3-201ENST00000403408 RNF185Q96GF1 192 aa7.42□□□□□ -1.22
SPTLC1P3-201ENST00000403408 IGLV10-54A0A075B6I4 117 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 CCDC160A6NGH7 325 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 B4DEV8 164 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 M0R036 132 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 PTTG1O95997 202 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 STAG3L2P0CL84 134 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 STAG3L3P0CL85 134 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 H2BFSP57053 126 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 RPL36AP83881 106 aaKnown RBP7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 PRR27Q6MZM9 219 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 RPL36ALQ969Q0 106 aaKnown RBP7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 GFRA4Q9GZZ7 299 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 ARL2-SNX15V9GYD0 113 aa7.41□□□□□ -1.22
SPTLC1P3-201ENST00000403408 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 hDV102S1A0JD36 115 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 FABP5P3A8MUU1 101 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 M0R381 172 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 GCHFRP30047 84 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 ZFP69Q49AA0 526 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 HSD17B11Q8NBQ5 300 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 OR11H4Q8NGC9 324 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 DPH3Q96FX2 82 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 CHCHD5Q9BSY4 110 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 DPH3P1Q9H4G8 78 aa7.4□□□□□ -1.22
SPTLC1P3-201ENST00000403408 A0A1W2PPV4 95 aa7.39□□□□□ -1.23
SPTLC1P3-201ENST00000403408 GAGE6Q13070 117 aa7.39□□□□□ -1.23
SPTLC1P3-201ENST00000403408 SAPCD1Q5SSQ6 148 aa7.39□□□□□ -1.23
SPTLC1P3-201ENST00000403408 CLRN3Q8NCR9 226 aa7.39□□□□□ -1.23
SPTLC1P3-201ENST00000403408 SCGB1C1Q8TD33 95 aa7.39□□□□□ -1.23
SPTLC1P3-201ENST00000403408 PPP1R1CQ8WVI7 109 aa7.39□□□□□ -1.23
SPTLC1P3-201ENST00000403408 TMSB15BA0A087X1C1 80 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 KRTAP9-6A0A140TA67 174 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 SH2D1AO60880 128 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 COX6A2Q02221 97 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 Q86TA4 180 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 C20orf203Q8NBC4 194 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 PRSS3P2Q8NHM4 247 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 GTSF1Q8WW33 167 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 RAB24Q969Q5 203 aa7.38□□□□□ -1.23
SPTLC1P3-201ENST00000403408 RPL12P30050 165 aaKnown RBP7.37□□□□□ -1.23
SPTLC1P3-201ENST00000403408 CDC34P49427 236 aaPredicted RBP7.37□□□□□ -1.23
SPTLC1P3-201ENST00000403408 C15orf56Q8N910 161 aa7.37□□□□□ -1.23
SPTLC1P3-201ENST00000403408 INO80EQ8NBZ0 244 aaPredicted RBP7.37□□□□□ -1.23
SPTLC1P3-201ENST00000403408 LYPD6BQ8NI32 183 aa7.37□□□□□ -1.23
SPTLC1P3-201ENST00000403408 C7orf33Q8WU49 177 aa7.37□□□□□ -1.23
SPTLC1P3-201ENST00000403408 K7EQM0 130 aa7.36□□□□□ -1.23
SPTLC1P3-201ENST00000403408 MPC2O95563 127 aa7.36□□□□□ -1.23
SPTLC1P3-201ENST00000403408 RAB5CP51148 216 aa7.36□□□□□ -1.23
SPTLC1P3-201ENST00000403408 COX8CQ7Z4L0 72 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms