RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 TRAV12-2A0A075B6T6 113 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 IGIPA6NJ69 53 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 RIPPLY3P57055 190 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 Q8N1Y9 231 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 HIST1H4GQ99525 98 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 NHP2Q9NX24 153 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 MDFICQ9P1T7 246 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 SDHAF1A6NFY7 115 aa17.13■□□□□ 0.33
RABGGTA-202ENST00000399409 TIMM17AQ99595 171 aa17.13■□□□□ 0.33
RABGGTA-202ENST00000399409 USP9XQ93008 2570 aaPredicted RBP17.13■□□□□ 0.33
RABGGTA-202ENST00000399409 K7ERU9 68 aa17.12■□□□□ 0.33
RABGGTA-202ENST00000399409 SPINK13Q1W4C9 94 aa17.12■□□□□ 0.33
RABGGTA-202ENST00000399409 IGSF10Q6WRI0 2623 aa17.12■□□□□ 0.33
RABGGTA-202ENST00000399409 CELSR1Q9NYQ6 3014 aa17.12■□□□□ 0.33
RABGGTA-202ENST00000399409 TRGV11A0A075B6L2 103 aa17.12■□□□□ 0.33
RABGGTA-202ENST00000399409 PMVKQ15126 192 aa17.12■□□□□ 0.33
RABGGTA-202ENST00000399409 TRBV7-3A0A075B6L6 115 aa17.11■□□□□ 0.33
RABGGTA-202ENST00000399409 CRYGDP07320 174 aa17.11■□□□□ 0.33
RABGGTA-202ENST00000399409 PRADC1Q9BSG0 188 aa17.11■□□□□ 0.33
RABGGTA-202ENST00000399409 CSPG4Q6UVK1 2322 aa17.11■□□□□ 0.33
RABGGTA-202ENST00000399409 HOXA3O43365 443 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 TSHBP01222 138 aa17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 AMTNQ6UX39 209 aa17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 K7ERJ3 54 aa17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 RNF151Q2KHN1 245 aa17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 FAM74A4Q5TZK3 123 aa17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 TRPT1Q86TN4 253 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 BEX4Q9NWD9 120 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 COL12A1Q99715 3063 aa17.1■□□□□ 0.33
RABGGTA-202ENST00000399409 M0QY20 66 aa17.09■□□□□ 0.33
RABGGTA-202ENST00000399409 ZNF56Q15929 161 aa17.09■□□□□ 0.33
RABGGTA-202ENST00000399409 TCTEX1D4Q5JR98 221 aa17.09■□□□□ 0.33
RABGGTA-202ENST00000399409 HERVK_113P61574 105 aa17.09■□□□□ 0.33
RABGGTA-202ENST00000399409 DUX5Q96PT3 197 aa17.09■□□□□ 0.33
RABGGTA-202ENST00000399409 ZFHX3Q15911 3703 aa17.08■□□□□ 0.33
RABGGTA-202ENST00000399409 RHOHQ15669 191 aa17.08■□□□□ 0.33
RABGGTA-202ENST00000399409 C12orf74Q32Q52 190 aa17.08■□□□□ 0.33
RABGGTA-202ENST00000399409 FLNCQ14315 2725 aa17.08■□□□□ 0.32
RABGGTA-202ENST00000399409 Q8N2B8 174 aa17.08■□□□□ 0.32
RABGGTA-202ENST00000399409 ZNF256Q9Y2P7 627 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-202ENST00000399409 IGLV4-69A0A075B6H9 119 aa17.07■□□□□ 0.32
RABGGTA-202ENST00000399409 NSUN5P1Q3KNT7 163 aa17.07■□□□□ 0.32
RABGGTA-202ENST00000399409 LRRC75A-AS1Q8N1F1 130 aa17.07■□□□□ 0.32
RABGGTA-202ENST00000399409 TRAV2A0A0B4J234 112 aa17.06■□□□□ 0.32
RABGGTA-202ENST00000399409 IGLL5B9A064 214 aa17.06■□□□□ 0.32
RABGGTA-202ENST00000399409 PRB1P04280 392 aa17.06■□□□□ 0.32
RABGGTA-202ENST00000399409 SCGB2A2Q13296 93 aa17.06■□□□□ 0.32
RABGGTA-202ENST00000399409 MORN3Q6PF18 240 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-202ENST00000399409 VPS13CQ709C8 3753 aa17.06■□□□□ 0.32
RABGGTA-202ENST00000399409 C11orf86A6NJI1 115 aa17.05■□□□□ 0.32
RABGGTA-202ENST00000399409 ZNF815PA8K554 130 aa17.05■□□□□ 0.32
RABGGTA-202ENST00000399409 RPL39P62891 51 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-202ENST00000399409 A0A1B0GWB2 263 aa17.05■□□□□ 0.32
RABGGTA-202ENST00000399409 ZNF876PQ49A33 203 aa17.05■□□□□ 0.32
RABGGTA-202ENST00000399409 A8MTW9 85 aa17.04■□□□□ 0.32
RABGGTA-202ENST00000399409 DEFB113Q30KQ7 82 aa17.04■□□□□ 0.32
RABGGTA-202ENST00000399409 PCP4P48539 62 aa17.03■□□□□ 0.32
RABGGTA-202ENST00000399409 SLURP1P55000 103 aa17.03■□□□□ 0.32
RABGGTA-202ENST00000399409 CD300EQ496F6 205 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-202ENST00000399409 VPS25Q9BRG1 176 aa17.03■□□□□ 0.32
RABGGTA-202ENST00000399409 PEMTQ9UBM1 199 aa17.03■□□□□ 0.32
RABGGTA-202ENST00000399409 Q5PR19 223 aa17.02■□□□□ 0.32
RABGGTA-202ENST00000399409 ZNF479Q96JC4 524 aa17.02■□□□□ 0.32
RABGGTA-202ENST00000399409 ACACBO00763 2458 aa17.02■□□□□ 0.31
RABGGTA-202ENST00000399409 EDA2RQ9HAV5 297 aa17.01■□□□□ 0.31
RABGGTA-202ENST00000399409 SCGB1D4Q6XE38 83 aa17.01■□□□□ 0.31
RABGGTA-202ENST00000399409 KNCNA6PVL3 124 aa17■□□□□ 0.31
RABGGTA-202ENST00000399409 I3L3M4 83 aa17■□□□□ 0.31
RABGGTA-202ENST00000399409 DEFB131AP59861 70 aa17■□□□□ 0.31
RABGGTA-202ENST00000399409 ANKRD17O75179 2603 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 CR1P17927 2039 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 TMEM238LA0A1B0GVL6 79 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 A6NJY4 79 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 C4orf3Q8WVX3 66 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 H3BMM0 161 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 KRTAP10-9P60411 292 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 RRN3P1Q2M238 152 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 DEFB104AQ8WTQ1 72 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 BBC3Q96PG8 261 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 CELSR2Q9HCU4 2923 aa16.99■□□□□ 0.31
RABGGTA-202ENST00000399409 C18orf65Q6ZTR6 163 aa16.98■□□□□ 0.31
RABGGTA-202ENST00000399409 NFE4Q86UQ8 179 aa16.98■□□□□ 0.31
RABGGTA-202ENST00000399409 ZNF843Q8N446 348 aa16.98■□□□□ 0.31
RABGGTA-202ENST00000399409 RBMY1A1P0DJD3 496 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-202ENST00000399409 RBMY1CP0DJD4 496 aa16.98■□□□□ 0.31
RABGGTA-202ENST00000399409 RBMY1FQ15415 496 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-202ENST00000399409 DEFB136Q30KP8 78 aa16.98■□□□□ 0.31
RABGGTA-202ENST00000399409 C20orf203Q8NBC4 194 aa16.98■□□□□ 0.31
RABGGTA-202ENST00000399409 PRRC2AP48634 2157 aaKnown RBP16.97■□□□□ 0.31
RABGGTA-202ENST00000399409 SAP30O75446 220 aa16.97■□□□□ 0.31
RABGGTA-202ENST00000399409 PIK3CD-AS1Q5SR53 167 aa16.97■□□□□ 0.31
RABGGTA-202ENST00000399409 PLEKHB2Q96CS7 222 aa16.97■□□□□ 0.31
RABGGTA-202ENST00000399409 EMP1P54849 157 aa16.96■□□□□ 0.31
RABGGTA-202ENST00000399409 SPAG8Q99932 426 aaPredicted RBP16.96■□□□□ 0.31
RABGGTA-202ENST00000399409 MYO18BQ8IUG5 2567 aa16.96■□□□□ 0.31
RABGGTA-202ENST00000399409 AGRNO00468 2067 aa16.96■□□□□ 0.31
RABGGTA-202ENST00000399409 P0DMU3 169 aa16.96■□□□□ 0.31
RABGGTA-202ENST00000399409 FAM231AP0DMU4 169 aa16.96■□□□□ 0.31
RABGGTA-202ENST00000399409 FAM231CP0DMU5 169 aa16.96■□□□□ 0.31
RABGGTA-202ENST00000399409 TMEM170BQ5T4T1 132 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms