RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 LINC00482Q8N8I6 264 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 TRAV4A0A0B4J268 109 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 A0A1B0GTL3 188 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 FGF6P10767 208 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 C17orf82Q86X59 251 aaPredicted RBP3.95□□□□□ -1.78
TTC3-204ENST00000399017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.95□□□□□ -1.78
TTC3-204ENST00000399017 IGHV3-30P01768 117 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 IGHV3-33P01772 117 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 NMBP08949 121 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 IGHV3-30-3P0DP02 117 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 IGHV3-30-5P0DP03 117 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 PRR4Q16378 134 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 LINC01590Q5TEZ4 76 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 TREML4Q6UXN2 200 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 IGHV4-30-2A0A087WSY4 118 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 PRR30Q53SZ7 412 aaPredicted RBP3.95□□□□□ -1.78
TTC3-204ENST00000399017 IGLV2-18A0A075B6J9 118 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 FASNP49327 2511 aaKnown RBP3.95□□□□□ -1.78
TTC3-204ENST00000399017 H0YIZ8 118 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 DDTP30046 118 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 LY6G6FQ5SQ64 297 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 CARD19Q96LW7 228 aa3.95□□□□□ -1.78
TTC3-204ENST00000399017 C10orf105Q8TEF2 133 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 RSPO3Q9BXY4 272 aaPredicted RBP3.94□□□□□ -1.78
TTC3-204ENST00000399017 TMEM14CQ9P0S9 112 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 K7EMT4 169 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 HLA-DMBP28068 263 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 SPAG11BQ08648 103 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 MIAQ16674 131 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 TGFBR3LH3BV60 316 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 GATA1P15976 413 aaPredicted RBP3.94□□□□□ -1.78
TTC3-204ENST00000399017 FBXL19-AS1Q494R0 122 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 CD177Q8N6Q3 437 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 FGF23Q9GZV9 251 aaPredicted RBP3.94□□□□□ -1.78
TTC3-204ENST00000399017 DNAJC9-AS1A6NH13 148 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 KNCNA6PVL3 124 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 LINC00473A8K010 186 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 SIVA1O15304 175 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 PRO1854Q9UHT4 67 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 CENPVL1A0A0U1RR11 272 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 CENPVL3A0A0U1RRI6 287 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 NCR3O14931 201 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 C2orf66Q6UXQ4 117 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 TRBV10-2A0A0K0K1G8 114 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 C2orf70A6NJV1 201 aa3.94□□□□□ -1.78
TTC3-204ENST00000399017 TRAV12-1A0A0B4J245 112 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 F8VRH5 84 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 SLURP1P55000 103 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.93□□□□□ -1.78
TTC3-204ENST00000399017 IGLV10-54A0A075B6I4 117 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 IGKV1-12A0A0C4DH73 117 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 PPP1R3EQ9H7J1 279 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 G3V318 75 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 NDUFA4L2Q9NRX3 87 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 IGKV1D-17A0A075B6S4 117 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 NUP35Q8NFH5 326 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 SELENOKQ9Y6D0 94 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 IFITM1P13164 125 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 PLA2G2AP14555 144 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 AGMATQ9BSE5 352 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 WDR83OSQ9Y284 106 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 COL27A1Q8IZC6 1860 aaPredicted RBP3.93□□□□□ -1.78
TTC3-204ENST00000399017 PRRC2CQ9Y520 2896 aaKnown RBP3.93□□□□□ -1.78
TTC3-204ENST00000399017 H3BUT2 72 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 PCP2Q8IVA1 136 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 BAALC-AS2P0C853 105 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 RPL28P46779 137 aaKnown RBP3.93□□□□□ -1.78
TTC3-204ENST00000399017 DEFB136Q30KP8 78 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 Q6ZS49 121 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 LYPD6Q86Y78 171 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 NTN5Q8WTR8 489 aaPredicted RBP3.93□□□□□ -1.78
TTC3-204ENST00000399017 IGKV1D-13A0A0B4J2D9 117 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 IGHV3-38A0A0C4DH36 116 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 IGKV1-13P0DP09 117 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 XAF1Q6GPH4 301 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 ZNF837Q96EG3 531 aaPredicted RBP3.93□□□□□ -1.78
TTC3-204ENST00000399017 C5orf38Q86SI9 138 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 Q8TAT8 98 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 V9GYY9 64 aa3.93□□□□□ -1.78
TTC3-204ENST00000399017 IGLV1-44P01699 117 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 ARTNQ5T4W7 220 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 COX7B2Q8TF08 81 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 X6R8D5 127 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 USP24Q9UPU5 2620 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 IGKV2-24A0A0C4DH68 120 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 A0A1B0GV90 55 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 MED14OSP0DP75 135 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 QRFPP83859 136 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 LINC00114Q6XXX2 140 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 PRR25Q96S07 402 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 ANKRD11Q6UB99 2663 aaPredicted RBP3.92□□□□□ -1.78
TTC3-204ENST00000399017 IGKV1-27A0A075B6S5 117 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 SNAI2O43623 268 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 COX6B2Q6YFQ2 88 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 NRTNQ99748 197 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 FNDC4Q9H6D8 234 aaPredicted RBP3.92□□□□□ -1.78
TTC3-204ENST00000399017 SPANXB1Q9NS25 103 aaPredicted RBP3.92□□□□□ -1.78
TTC3-204ENST00000399017 IGLV3-9A0A075B6K5 115 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 UFSP1Q6NVU6 142 aa3.92□□□□□ -1.78
TTC3-204ENST00000399017 POLQO75417 2590 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms