RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RPP21Q9H633 154 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-207ENST00000397411 LY96Q9Y6Y9 160 aa17.5■□□□□ 0.39
TSPAN4-207ENST00000397411 GATCO43716 136 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-207ENST00000397411 UPK3BQ9BT76 320 aa17.49■□□□□ 0.39
TSPAN4-207ENST00000397411 A0A1W2PPQ1 181 aa17.48■□□□□ 0.39
TSPAN4-207ENST00000397411 F2Z2F3 143 aa17.48■□□□□ 0.39
TSPAN4-207ENST00000397411 CRYGDP07320 174 aa17.48■□□□□ 0.39
TSPAN4-207ENST00000397411 SMIM17P0DL12 118 aa17.48■□□□□ 0.39
TSPAN4-207ENST00000397411 ERVFC1-1P60608 527 aa17.48■□□□□ 0.39
TSPAN4-207ENST00000397411 CACNG7P62955 275 aa17.48■□□□□ 0.39
TSPAN4-207ENST00000397411 UFSP1Q6NVU6 142 aa17.48■□□□□ 0.39
TSPAN4-207ENST00000397411 NBDYA0A0U1RRE5 68 aa17.47■□□□□ 0.39
TSPAN4-207ENST00000397411 NXPH4O95158 308 aa17.47■□□□□ 0.39
TSPAN4-207ENST00000397411 IGLC6P0CF74 106 aa17.47■□□□□ 0.39
TSPAN4-207ENST00000397411 FAM74A3Q4VXF1 159 aa17.47■□□□□ 0.39
TSPAN4-207ENST00000397411 GAGE12JA6NER3 117 aa17.46■□□□□ 0.39
TSPAN4-207ENST00000397411 GAGE1Q13065 139 aa17.46■□□□□ 0.39
TSPAN4-207ENST00000397411 GAGE4Q13068 117 aa17.46■□□□□ 0.39
TSPAN4-207ENST00000397411 GAGE5Q13069 117 aa17.46■□□□□ 0.39
TSPAN4-207ENST00000397411 TMEM241Q24JQ0 296 aa17.46■□□□□ 0.39
TSPAN4-207ENST00000397411 GAGE13Q4V321 117 aa17.46■□□□□ 0.39
TSPAN4-207ENST00000397411 C14orf178Q8N769 122 aaPredicted RBP17.46■□□□□ 0.39
TSPAN4-207ENST00000397411 KMT2AQ03164 3969 aa17.46■□□□□ 0.39
TSPAN4-207ENST00000397411 F5H697 171 aa17.45■□□□□ 0.38
TSPAN4-207ENST00000397411 ZNF56Q15929 161 aa17.45■□□□□ 0.38
TSPAN4-207ENST00000397411 LYZL1Q6UWQ5 148 aa17.45■□□□□ 0.38
TSPAN4-207ENST00000397411 Q6ZR54 194 aa17.45■□□□□ 0.38
TSPAN4-207ENST00000397411 ATP6V0E2Q8NHE4 81 aa17.45■□□□□ 0.38
TSPAN4-207ENST00000397411 SIVA1O15304 175 aa17.44■□□□□ 0.38
TSPAN4-207ENST00000397411 SRSF3P84103 164 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-207ENST00000397411 SOHLH1Q5JUK2 328 aa17.44■□□□□ 0.38
TSPAN4-207ENST00000397411 FAM231DQ6ZW35 169 aa17.44■□□□□ 0.38
TSPAN4-207ENST00000397411 LINC01551Q86U37 167 aa17.44■□□□□ 0.38
TSPAN4-207ENST00000397411 AP1S3Q96PC3 154 aa17.44■□□□□ 0.38
TSPAN4-207ENST00000397411 C9JQL5 133 aa17.43■□□□□ 0.38
TSPAN4-207ENST00000397411 RAB4BP61018 213 aa17.43■□□□□ 0.38
TSPAN4-207ENST00000397411 TTC32Q5I0X7 151 aa17.43■□□□□ 0.38
TSPAN4-207ENST00000397411 A8MWL6 223 aa17.42■□□□□ 0.38
TSPAN4-207ENST00000397411 C1orf134Q5TEV5 83 aa17.42■□□□□ 0.38
TSPAN4-207ENST00000397411 DNAH6Q9C0G6 4158 aa17.4■□□□□ 0.38
TSPAN4-207ENST00000397411 C15orf54Q8N8G6 183 aa17.4■□□□□ 0.38
TSPAN4-207ENST00000397411 MSRB1Q9NZV6 116 aa17.4■□□□□ 0.38
TSPAN4-207ENST00000397411 NAT8Q9UHE5 227 aa17.4■□□□□ 0.38
TSPAN4-207ENST00000397411 TRAV8-6A0A0B4J262 113 aa17.39■□□□□ 0.37
TSPAN4-207ENST00000397411 TRGC1P0CF51 173 aa17.39■□□□□ 0.37
TSPAN4-207ENST00000397411 NTF3P20783 257 aa17.39■□□□□ 0.37
TSPAN4-207ENST00000397411 TIRAPP58753 221 aa17.39■□□□□ 0.37
TSPAN4-207ENST00000397411 TWIST1Q15672 202 aa17.39■□□□□ 0.37
TSPAN4-207ENST00000397411 ADIRFQ15847 76 aa17.39■□□□□ 0.37
TSPAN4-207ENST00000397411 WDR73Q6P4I2 378 aa17.39■□□□□ 0.37
TSPAN4-207ENST00000397411 GTSF1LQ9H1H1 148 aa17.39■□□□□ 0.37
TSPAN4-207ENST00000397411 MGPP08493 103 aa17.38■□□□□ 0.37
TSPAN4-207ENST00000397411 RPL36AP83881 106 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-207ENST00000397411 OR10J3Q5JRS4 329 aa17.38■□□□□ 0.37
TSPAN4-207ENST00000397411 CLLU1Q5K131 121 aa17.38■□□□□ 0.37
TSPAN4-207ENST00000397411 RPL36ALQ969Q0 106 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-207ENST00000397411 OSTCQ9NRP0 149 aa17.38■□□□□ 0.37
TSPAN4-207ENST00000397411 TRAV9-2A0A087WT02 112 aa17.37■□□□□ 0.37
TSPAN4-207ENST00000397411 TRBV10-1A0A0K0K1A3 114 aa17.37■□□□□ 0.37
TSPAN4-207ENST00000397411 Q9UF83 564 aa17.37■□□□□ 0.37
TSPAN4-207ENST00000397411 CTRLP40313 264 aa17.36■□□□□ 0.37
TSPAN4-207ENST00000397411 RPL23P62829 140 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-207ENST00000397411 CT83Q5H943 113 aa17.36■□□□□ 0.37
TSPAN4-207ENST00000397411 LINC00336Q6ZUF6 198 aa17.36■□□□□ 0.37
TSPAN4-207ENST00000397411 BORCS7Q96B45 105 aa17.36■□□□□ 0.37
TSPAN4-207ENST00000397411 PGLYRP4Q96LB8 373 aa17.36■□□□□ 0.37
TSPAN4-207ENST00000397411 WFDC10BQ8IUB3 73 aa17.35■□□□□ 0.37
TSPAN4-207ENST00000397411 C6orf223Q8N319 242 aa17.35■□□□□ 0.37
TSPAN4-207ENST00000397411 KIF25-AS1Q9Y6Z4 181 aa17.35■□□□□ 0.37
TSPAN4-207ENST00000397411 EVI2AP22794 236 aa17.34■□□□□ 0.37
TSPAN4-207ENST00000397411 LELP1Q5T871 98 aa17.34■□□□□ 0.37
TSPAN4-207ENST00000397411 SMIM15Q7Z3B0 74 aa17.34■□□□□ 0.37
TSPAN4-207ENST00000397411 GTSF1Q8WW33 167 aa17.34■□□□□ 0.37
TSPAN4-207ENST00000397411 ISOC2Q96AB3 205 aa17.34■□□□□ 0.37
TSPAN4-207ENST00000397411 TRBV7-3A0A075B6L6 115 aa17.33■□□□□ 0.36
TSPAN4-207ENST00000397411 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.33■□□□□ 0.36
TSPAN4-207ENST00000397411 OR10G8Q8NGN5 311 aa17.33■□□□□ 0.36
TSPAN4-207ENST00000397411 DPH3P1Q9H4G8 78 aa17.33■□□□□ 0.36
TSPAN4-207ENST00000397411 RTL8CO15255 209 aa17.32■□□□□ 0.36
TSPAN4-207ENST00000397411 IFITM2Q01629 132 aa17.32■□□□□ 0.36
TSPAN4-207ENST00000397411 TSKUQ8WUA8 353 aa17.32■□□□□ 0.36
TSPAN4-207ENST00000397411 A0A087WWC5 75 aa17.31■□□□□ 0.36
TSPAN4-207ENST00000397411 IGHV3-38A0A0C4DH36 116 aa17.31■□□□□ 0.36
TSPAN4-207ENST00000397411 PRSS29PA6NIE9 313 aa17.31■□□□□ 0.36
TSPAN4-207ENST00000397411 H7C1H1 209 aa17.31■□□□□ 0.36
TSPAN4-207ENST00000397411 LINC00694P0DN24 101 aa17.31■□□□□ 0.36
TSPAN4-207ENST00000397411 LINC00315P59091 139 aa17.3■□□□□ 0.36
TSPAN4-207ENST00000397411 CNFNQ9BYD5 112 aa17.3■□□□□ 0.36
TSPAN4-207ENST00000397411 KRTAP1-5Q9BYS1 174 aa17.3■□□□□ 0.36
TSPAN4-207ENST00000397411 GFRA4Q9GZZ7 299 aa17.3■□□□□ 0.36
TSPAN4-207ENST00000397411 FOXA3P55318 350 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-207ENST00000397411 NEXN-AS1Q8NBZ9 246 aa17.29■□□□□ 0.36
TSPAN4-207ENST00000397411 TNFRSF18Q9Y5U5 241 aa17.29■□□□□ 0.36
TSPAN4-207ENST00000397411 V9GYV3 84 aa17.29■□□□□ 0.36
TSPAN4-207ENST00000397411 DNAH10OSP0CZ25 163 aa17.28■□□□□ 0.36
TSPAN4-207ENST00000397411 UBE2D3P61077 147 aa17.28■□□□□ 0.36
TSPAN4-207ENST00000397411 UBE2D2P62837 147 aa17.28■□□□□ 0.36
TSPAN4-207ENST00000397411 FAM231BA6NCW3 169 aa17.27■□□□□ 0.36
TSPAN4-207ENST00000397411 HIGD1CA8MV81 97 aa17.27■□□□□ 0.36
TSPAN4-207ENST00000397411 SUMO4Q6EEV6 95 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms