RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PRADC1Q9BSG0 188 aa14.65□□□□□ -0.06
TSPAN4-206ENST00000397408 Q6ZSN1 163 aa14.64□□□□□ -0.07
TSPAN4-206ENST00000397408 NEGR1Q7Z3B1 354 aa14.64□□□□□ -0.07
TSPAN4-206ENST00000397408 ZNRF2Q8NHG8 242 aa14.64□□□□□ -0.07
TSPAN4-206ENST00000397408 SMDT1Q9H4I9 107 aa14.64□□□□□ -0.07
TSPAN4-206ENST00000397408 CRYGDP07320 174 aa14.63□□□□□ -0.07
TSPAN4-206ENST00000397408 IFITM2Q01629 132 aa14.63□□□□□ -0.07
TSPAN4-206ENST00000397408 MRPS16Q9Y3D3 137 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-206ENST00000397408 FAM74A3Q4VXF1 159 aa14.62□□□□□ -0.07
TSPAN4-206ENST00000397408 FAM231DQ6ZW35 169 aa14.62□□□□□ -0.07
TSPAN4-206ENST00000397408 M0R2N4 97 aa14.61□□□□□ -0.07
TSPAN4-206ENST00000397408 GATCO43716 136 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-206ENST00000397408 ERVFC1-1P60608 527 aa14.61□□□□□ -0.07
TSPAN4-206ENST00000397408 A0A1W2PPQ1 181 aa14.6□□□□□ -0.07
TSPAN4-206ENST00000397408 CLLU1Q5K131 121 aa14.6□□□□□ -0.07
TSPAN4-206ENST00000397408 C14orf178Q8N769 122 aaPredicted RBP14.6□□□□□ -0.07
TSPAN4-206ENST00000397408 UPK3BQ9BT76 320 aa14.6□□□□□ -0.07
TSPAN4-206ENST00000397408 CACNG7P62955 275 aa14.59□□□□□ -0.07
TSPAN4-206ENST00000397408 TMEM241Q24JQ0 296 aa14.59□□□□□ -0.07
TSPAN4-206ENST00000397408 LYPD5Q6UWN5 251 aa14.59□□□□□ -0.07
TSPAN4-206ENST00000397408 LYZL1Q6UWQ5 148 aa14.59□□□□□ -0.07
TSPAN4-206ENST00000397408 AP1S3Q96PC3 154 aa14.59□□□□□ -0.07
TSPAN4-206ENST00000397408 F2Z2F3 143 aa14.58□□□□□ -0.07
TSPAN4-206ENST00000397408 CTRLP40313 264 aa14.58□□□□□ -0.07
TSPAN4-206ENST00000397408 SH2D6Q7Z4S9 175 aa14.58□□□□□ -0.07
TSPAN4-206ENST00000397408 ZNF56Q15929 161 aa14.58□□□□□ -0.08
TSPAN4-206ENST00000397408 SOHLH1Q5JUK2 328 aa14.58□□□□□ -0.08
TSPAN4-206ENST00000397408 MSRB1Q9NZV6 116 aa14.58□□□□□ -0.08
TSPAN4-206ENST00000397408 NAT8Q9UHE5 227 aa14.58□□□□□ -0.08
TSPAN4-206ENST00000397408 RPL23P62829 140 aaKnown RBP14.57□□□□□ -0.08
TSPAN4-206ENST00000397408 CT83Q5H943 113 aa14.57□□□□□ -0.08
TSPAN4-206ENST00000397408 GTSF1Q8WW33 167 aa14.57□□□□□ -0.08
TSPAN4-206ENST00000397408 Q9H8V8 135 aa14.57□□□□□ -0.08
TSPAN4-206ENST00000397408 GAGE12JA6NER3 117 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 A8MWL6 223 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 SMIM17P0DL12 118 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 GAGE1Q13065 139 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 GAGE4Q13068 117 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 GAGE5Q13069 117 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 ADIRFQ15847 76 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 GAGE13Q4V321 117 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 ISOC2Q96AB3 205 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 OSTCQ9NRP0 149 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 Q9UF83 564 aa14.56□□□□□ -0.08
TSPAN4-206ENST00000397408 Q6ZR54 194 aa14.55□□□□□ -0.08
TSPAN4-206ENST00000397408 NBDYA0A0U1RRE5 68 aa14.54□□□□□ -0.08
TSPAN4-206ENST00000397408 LINC00694P0DN24 101 aa14.54□□□□□ -0.08
TSPAN4-206ENST00000397408 C15orf54Q8N8G6 183 aa14.54□□□□□ -0.08
TSPAN4-206ENST00000397408 CNFNQ9BYD5 112 aa14.54□□□□□ -0.08
TSPAN4-206ENST00000397408 KIF25-AS1Q9Y6Z4 181 aa14.54□□□□□ -0.08
TSPAN4-206ENST00000397408 NTF3P20783 257 aa14.53□□□□□ -0.08
TSPAN4-206ENST00000397408 RAB4BP61018 213 aa14.53□□□□□ -0.08
TSPAN4-206ENST00000397408 WDR73Q6P4I2 378 aa14.53□□□□□ -0.08
TSPAN4-206ENST00000397408 ATP6V0E2Q8NHE4 81 aa14.53□□□□□ -0.08
TSPAN4-206ENST00000397408 F5H697 171 aa14.52□□□□□ -0.08
TSPAN4-206ENST00000397408 TRGC1P0CF51 173 aa14.52□□□□□ -0.08
TSPAN4-206ENST00000397408 TIRAPP58753 221 aa14.52□□□□□ -0.08
TSPAN4-206ENST00000397408 TRBV10-1A0A0K0K1A3 114 aa14.51□□□□□ -0.09
TSPAN4-206ENST00000397408 SIVA1O15304 175 aa14.51□□□□□ -0.09
TSPAN4-206ENST00000397408 MGPP08493 103 aa14.51□□□□□ -0.09
TSPAN4-206ENST00000397408 TWIST1Q15672 202 aa14.51□□□□□ -0.09
TSPAN4-206ENST00000397408 TSKUQ8WUA8 353 aa14.51□□□□□ -0.09
TSPAN4-206ENST00000397408 PGLYRP4Q96LB8 373 aa14.51□□□□□ -0.09
TSPAN4-206ENST00000397408 V9GYV3 84 aa14.51□□□□□ -0.09
TSPAN4-206ENST00000397408 EVI2AP22794 236 aa14.5□□□□□ -0.09
TSPAN4-206ENST00000397408 LINC00315P59091 139 aa14.5□□□□□ -0.09
TSPAN4-206ENST00000397408 WFDC10BQ8IUB3 73 aa14.5□□□□□ -0.09
TSPAN4-206ENST00000397408 TTC32Q5I0X7 151 aa14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 OR10G8Q8NGN5 311 aa14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 GTSF1LQ9H1H1 148 aa14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 DNAH10Q8IVF4 4471 aa14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 HIGD1CA8MV81 97 aa14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 RPL36AP83881 106 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 RPL36ALQ969Q0 106 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 KRTAP1-5Q9BYS1 174 aa14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 GFRA4Q9GZZ7 299 aa14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 DPH3P1Q9H4G8 78 aa14.49□□□□□ -0.09
TSPAN4-206ENST00000397408 FOXA3P55318 350 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-206ENST00000397408 BORCS7Q96B45 105 aa14.48□□□□□ -0.09
TSPAN4-206ENST00000397408 FAM231BA6NCW3 169 aa14.47□□□□□ -0.09
TSPAN4-206ENST00000397408 LELP1Q5T871 98 aa14.47□□□□□ -0.09
TSPAN4-206ENST00000397408 NEXN-AS1Q8NBZ9 246 aa14.47□□□□□ -0.09
TSPAN4-206ENST00000397408 TRBV7-3A0A075B6L6 115 aa14.46□□□□□ -0.09
TSPAN4-206ENST00000397408 OR10J3Q5JRS4 329 aa14.46□□□□□ -0.09
TSPAN4-206ENST00000397408 C1orf134Q5TEV5 83 aa14.46□□□□□ -0.09
TSPAN4-206ENST00000397408 SUMO4Q6EEV6 95 aa14.46□□□□□ -0.09
TSPAN4-206ENST00000397408 FRAS1Q86XX4 4008 aa14.45□□□□□ -0.1
TSPAN4-206ENST00000397408 TRAV8-6A0A0B4J262 113 aa14.45□□□□□ -0.1
TSPAN4-206ENST00000397408 UBE2D3P61077 147 aa14.45□□□□□ -0.1
TSPAN4-206ENST00000397408 UBE2D2P62837 147 aa14.45□□□□□ -0.1
TSPAN4-206ENST00000397408 RTL8CO15255 209 aa14.44□□□□□ -0.1
TSPAN4-206ENST00000397408 SMIM15Q7Z3B0 74 aa14.44□□□□□ -0.1
TSPAN4-206ENST00000397408 DNAH2Q9P225 4427 aa14.44□□□□□ -0.1
TSPAN4-206ENST00000397408 A0A1B0GUT8 65 aa14.43□□□□□ -0.1
TSPAN4-206ENST00000397408 H7C1H1 209 aa14.43□□□□□ -0.1
TSPAN4-206ENST00000397408 M0QY20 66 aa14.43□□□□□ -0.1
TSPAN4-206ENST00000397408 DNAH10OSP0CZ25 163 aa14.43□□□□□ -0.1
TSPAN4-206ENST00000397408 UQCC3Q6UW78 93 aa14.43□□□□□ -0.1
TSPAN4-206ENST00000397408 C6orf223Q8N319 242 aa14.43□□□□□ -0.1
TSPAN4-206ENST00000397408 IGHV3-38A0A0C4DH36 116 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms