RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PPBPP02775 128 aa12.73□□□□□ -0.37
TNFSF13-205ENST00000396545 C3orf79P0CE67 100 aa12.73□□□□□ -0.37
TNFSF13-205ENST00000396545 ASIPP42127 132 aa12.73□□□□□ -0.37
TNFSF13-205ENST00000396545 H3BMM0 161 aa12.72□□□□□ -0.37
TNFSF13-205ENST00000396545 KRTDAPP60985 99 aa12.72□□□□□ -0.37
TNFSF13-205ENST00000396545 TEX43Q6ZNM6 134 aa12.72□□□□□ -0.37
TNFSF13-205ENST00000396545 ZNF664Q8N3J9 261 aa12.72□□□□□ -0.37
TNFSF13-205ENST00000396545 C7orf71A4D174 169 aa12.71□□□□□ -0.37
TNFSF13-205ENST00000396545 LINC00587B1AMM8 73 aa12.71□□□□□ -0.37
TNFSF13-205ENST00000396545 CKS2P33552 79 aa12.71□□□□□ -0.37
TNFSF13-205ENST00000396545 CDKN1BP46527 198 aa12.71□□□□□ -0.37
TNFSF13-205ENST00000396545 LAMTOR2Q9Y2Q5 125 aa12.71□□□□□ -0.37
TNFSF13-205ENST00000396545 ODF3L2Q3SX64 289 aa12.7□□□□□ -0.38
TNFSF13-205ENST00000396545 SPANXN1Q5VSR9 72 aa12.7□□□□□ -0.38
TNFSF13-205ENST00000396545 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
TNFSF13-205ENST00000396545 NPYP01303 97 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 RNASE3P12724 160 aaKnown RBP12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 TDRG1Q3Y452 100 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 SMIM15Q7Z3B0 74 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 PRSS3P2Q8NHM4 247 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 AP5S1Q9NUS5 200 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 TSTD3H0UI37 97 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 SMKR1H3BMG3 65 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 NXPH4O95158 308 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 S100A4P26447 101 aaKnown RBP12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 FA2HQ7L5A8 372 aa12.69□□□□□ -0.38
TNFSF13-205ENST00000396545 KNCNA6PVL3 124 aa12.68□□□□□ -0.38
TNFSF13-205ENST00000396545 GNRH2O43555 120 aa12.68□□□□□ -0.38
TNFSF13-205ENST00000396545 EVI2AP22794 236 aa12.68□□□□□ -0.38
TNFSF13-205ENST00000396545 IFI27P40305 119 aaPredicted RBP12.68□□□□□ -0.38
TNFSF13-205ENST00000396545 PMCHL1Q16048 86 aa12.68□□□□□ -0.38
TNFSF13-205ENST00000396545 OVOL2Q9BRP0 275 aa12.68□□□□□ -0.38
TNFSF13-205ENST00000396545 KIR2DL5BA0A0G2JN68 375 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 KIR2DL5BA0A0G2JPC4 375 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 LINC01546A6NGU7 62 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 NCR2O95944 276 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 FAM159AQ6UWV7 190 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 STHQ8IWL8 128 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 KIR2DL5AQ8N109 375 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 C20orf144Q9BQM9 153 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 PRO1933Q9H354 126 aa12.67□□□□□ -0.38
TNFSF13-205ENST00000396545 TRAV12-3A0A0B4J271 114 aa12.66□□□□□ -0.38
TNFSF13-205ENST00000396545 BTF3P20290 206 aaKnown RBP12.66□□□□□ -0.38
TNFSF13-205ENST00000396545 PRSS47A8MTI9 375 aa12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 CRXO43186 299 aaPredicted RBP12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 GAS8-AS1O95177 125 aa12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 LEPROTL1O95214 131 aa12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 IGKV3-20P01619 116 aa12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 NUTF2P61970 127 aaKnown RBP12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 MAP1LC3AQ9H492 121 aa12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 PHLDA3Q9Y5J5 127 aa12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 TIMM8BQ9Y5J9 83 aaPredicted RBP12.65□□□□□ -0.38
TNFSF13-205ENST00000396545 TNFRSF6BO95407 300 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 SPINK13Q1W4C9 94 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 MRAP2Q96G30 205 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 TMEM70Q9BUB7 260 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 TRAV12-2A0A075B6T6 113 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 A0A096LNJ9 63 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 LOC389332A0A1B0GUA5 103 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 M0R381 172 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 LINC00173Q6ZV60 143 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 TRPT1Q86TN4 253 aaKnown RBP12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 HSPB8Q9UJY1 196 aa12.64□□□□□ -0.39
TNFSF13-205ENST00000396545 DDTP30046 118 aa12.63□□□□□ -0.39
TNFSF13-205ENST00000396545 NRACQ8N912 160 aa12.63□□□□□ -0.39
TNFSF13-205ENST00000396545 LINC00476Q8WZB0 136 aa12.63□□□□□ -0.39
TNFSF13-205ENST00000396545 C9orf85Q96MD7 179 aa12.63□□□□□ -0.39
TNFSF13-205ENST00000396545 DPH3P1Q9H4G8 78 aa12.63□□□□□ -0.39
TNFSF13-205ENST00000396545 IGHV1OR15-1A0A075B7D0 117 aa12.62□□□□□ -0.39
TNFSF13-205ENST00000396545 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
TNFSF13-205ENST00000396545 POM121L12Q8N7R1 296 aa12.62□□□□□ -0.39
TNFSF13-205ENST00000396545 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
TNFSF13-205ENST00000396545 SYS1-DBNDD2H3BUS1 97 aa12.61□□□□□ -0.39
TNFSF13-205ENST00000396545 SPRY2O43597 315 aa12.61□□□□□ -0.39
TNFSF13-205ENST00000396545 GATA1P15976 413 aaPredicted RBP12.61□□□□□ -0.39
TNFSF13-205ENST00000396545 ZNF124Q15973 351 aa12.61□□□□□ -0.39
TNFSF13-205ENST00000396545 SPATA12Q7Z6I5 190 aa12.61□□□□□ -0.39
TNFSF13-205ENST00000396545 AP1S3Q96PC3 154 aa12.61□□□□□ -0.39
TNFSF13-205ENST00000396545 VAMP8Q9BV40 100 aa12.61□□□□□ -0.39
TNFSF13-205ENST00000396545 TP53TG1Q9Y2A0 90 aa12.61□□□□□ -0.39
TNFSF13-205ENST00000396545 IGLV2-18A0A075B6J9 118 aa12.6□□□□□ -0.39
TNFSF13-205ENST00000396545 MORN3Q6PF18 240 aaPredicted RBP12.6□□□□□ -0.39
TNFSF13-205ENST00000396545 LINC00467Q9BRT7 94 aa12.6□□□□□ -0.39
TNFSF13-205ENST00000396545 A0A0J9YWU9 116 aa12.6□□□□□ -0.39
TNFSF13-205ENST00000396545 INSP01308 110 aa12.6□□□□□ -0.39
TNFSF13-205ENST00000396545 APOC4P55056 127 aa12.6□□□□□ -0.39
TNFSF13-205ENST00000396545 KIF25-AS1Q9Y6Z4 181 aa12.6□□□□□ -0.39
TNFSF13-205ENST00000396545 FRAS1Q86XX4 4008 aa12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 PET117Q6UWS5 81 aa12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 Q8N8P6 123 aa12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 C1QTNF4Q9BXJ3 329 aa12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 MAP1LC3CQ9BXW4 147 aa12.59□□□□□ -0.39
TNFSF13-205ENST00000396545 TRGV11A0A075B6L2 103 aa12.58□□□□□ -0.4
TNFSF13-205ENST00000396545 HBDP02042 147 aa12.58□□□□□ -0.4
TNFSF13-205ENST00000396545 DEFB135Q30KP9 77 aa12.58□□□□□ -0.4
TNFSF13-205ENST00000396545 C14orf178Q8N769 122 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms