RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 CREBBPQ92793 2442 aa13.71□□□□□ -0.22
HERPUD2-202ENST00000396081 IGIPA6NJ69 53 aa13.71□□□□□ -0.22
HERPUD2-202ENST00000396081 NTN5Q8WTR8 489 aaPredicted RBP13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 LENEPQ9Y5L5 61 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 ATRXP46100 2492 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 SNCGO76070 127 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 TRBV12-3P01733 135 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 SAA4P35542 130 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 BSNQ9UPA5 3926 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 SDHAF1A6NFY7 115 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 GAGE2BQ13066 116 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 GAGE2EQ4V326 116 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 IGF2-ASQ6U949 168 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 ITLN2Q8WWU7 325 aaPredicted RBP13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 GAGE2DQ9UEU5 116 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 U3KQE9 123 aa13.7□□□□□ -0.22
HERPUD2-202ENST00000396081 CENPVL3A0A0U1RRI6 287 aa13.69□□□□□ -0.22
HERPUD2-202ENST00000396081 IGHV3-11P01762 117 aa13.69□□□□□ -0.22
HERPUD2-202ENST00000396081 GAGE5Q13069 117 aa13.69□□□□□ -0.22
HERPUD2-202ENST00000396081 GAGE6Q13070 117 aa13.69□□□□□ -0.22
HERPUD2-202ENST00000396081 SUMO4Q6EEV6 95 aa13.69□□□□□ -0.22
HERPUD2-202ENST00000396081 OVOL1O14753 267 aa13.69□□□□□ -0.22
HERPUD2-202ENST00000396081 IGHV3OR16-10A0A075B7F0 116 aa13.68□□□□□ -0.22
HERPUD2-202ENST00000396081 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
HERPUD2-202ENST00000396081 SBSPONQ8IVN8 264 aa13.68□□□□□ -0.22
HERPUD2-202ENST00000396081 PTPRQQ9UMZ3 2332 aa13.68□□□□□ -0.22
HERPUD2-202ENST00000396081 VCYO14598 125 aa13.68□□□□□ -0.22
HERPUD2-202ENST00000396081 TCF15Q12870 199 aa13.67□□□□□ -0.22
HERPUD2-202ENST00000396081 C1orf122Q6ZSJ8 110 aa13.67□□□□□ -0.22
HERPUD2-202ENST00000396081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.67□□□□□ -0.224e-6■■□□□ 13.3
HERPUD2-202ENST00000396081 TRAV4A0A0B4J268 109 aa13.67□□□□□ -0.22
HERPUD2-202ENST00000396081 MUSTN1Q8IVN3 82 aa13.67□□□□□ -0.22
HERPUD2-202ENST00000396081 AJUBAQ96IF1 538 aa13.67□□□□□ -0.22
HERPUD2-202ENST00000396081 ZNF292O60281 2723 aa13.67□□□□□ -0.22
HERPUD2-202ENST00000396081 CFAP161Q6P656 301 aa13.67□□□□□ -0.22
HERPUD2-202ENST00000396081 FAM159AQ6UWV7 190 aa13.67□□□□□ -0.22
HERPUD2-202ENST00000396081 IGHV3-33P01772 117 aa13.66□□□□□ -0.22
HERPUD2-202ENST00000396081 ADARB2-AS1A8MUL3 147 aa13.66□□□□□ -0.22
HERPUD2-202ENST00000396081 CRLF1O75462 422 aa13.66□□□□□ -0.22
HERPUD2-202ENST00000396081 TTC32Q5I0X7 151 aa13.66□□□□□ -0.22
HERPUD2-202ENST00000396081 TMEM141Q96I45 108 aa13.66□□□□□ -0.22
HERPUD2-202ENST00000396081 POLR2KP53803 58 aaKnown RBP13.65□□□□□ -0.22
HERPUD2-202ENST00000396081 CCL21O00585 134 aa13.65□□□□□ -0.22
HERPUD2-202ENST00000396081 PRSS2P07478 247 aa13.65□□□□□ -0.22
HERPUD2-202ENST00000396081 ELANEP08246 267 aa13.65□□□□□ -0.22
HERPUD2-202ENST00000396081 Q8N1Y9 231 aa13.65□□□□□ -0.22
HERPUD2-202ENST00000396081 TRAV41A0A0B4J266 112 aa13.65□□□□□ -0.23
HERPUD2-202ENST00000396081 LINC00315P59091 139 aa13.65□□□□□ -0.23
HERPUD2-202ENST00000396081 ZNF56Q15929 161 aa13.64□□□□□ -0.23
HERPUD2-202ENST00000396081 ZNF876PQ49A33 203 aa13.64□□□□□ -0.23
HERPUD2-202ENST00000396081 SIRPDQ9H106 197 aa13.64□□□□□ -0.23
HERPUD2-202ENST00000396081 TEX49A0A1B0GTD5 131 aa13.64□□□□□ -0.23
HERPUD2-202ENST00000396081 EIF4EBP3O60516 100 aaPredicted RBP13.64□□□□□ -0.23
HERPUD2-202ENST00000396081 AMELXQ99217 191 aa13.64□□□□□ -0.23
HERPUD2-202ENST00000396081 TRAV12-3A0A0B4J271 114 aa13.63□□□□□ -0.23
HERPUD2-202ENST00000396081 TIMM17AQ99595 171 aa13.63□□□□□ -0.23
HERPUD2-202ENST00000396081 IGKV3-20P01619 116 aa13.63□□□□□ -0.23
HERPUD2-202ENST00000396081 CDSNQ15517 529 aa13.63□□□□□ -0.23
HERPUD2-202ENST00000396081 CITED1Q99966 193 aa13.63□□□□□ -0.23
HERPUD2-202ENST00000396081 ZNF580Q9UK33 172 aa13.63□□□□□ -0.23
HERPUD2-202ENST00000396081 KIF25-AS1Q9Y6Z4 181 aa13.63□□□□□ -0.23
HERPUD2-202ENST00000396081 HRNRQ86YZ3 2850 aaPredicted RBP13.63□□□□□ -0.23
HERPUD2-202ENST00000396081 NHLRC4P0CG21 123 aaPredicted RBP13.62□□□□□ -0.23
HERPUD2-202ENST00000396081 UBE2E1P51965 193 aa13.62□□□□□ -0.23
HERPUD2-202ENST00000396081 TMEM263Q8WUH6 116 aaKnown RBP13.62□□□□□ -0.23
HERPUD2-202ENST00000396081 LINC01620Q4KN68 170 aa13.62□□□□□ -0.23
HERPUD2-202ENST00000396081 SHISA2Q6UWI4 295 aa13.62□□□□□ -0.23
HERPUD2-202ENST00000396081 IGHV4OR15-8A0A075B7B6 117 aa13.61□□□□□ -0.23
HERPUD2-202ENST00000396081 A0A087WW49 117 aa13.61□□□□□ -0.23
HERPUD2-202ENST00000396081 MED14OSP0DP75 135 aa13.61□□□□□ -0.23
HERPUD2-202ENST00000396081 NDUFV3P56181 108 aaKnown RBP13.61□□□□□ -0.23
HERPUD2-202ENST00000396081 A0A0J9YXV3 536 aa13.61□□□□□ -0.23
HERPUD2-202ENST00000396081 ATXN8Q156A1 80 aa13.61□□□□□ -0.23
HERPUD2-202ENST00000396081 UBTD1Q9HAC8 227 aa13.61□□□□□ -0.23
HERPUD2-202ENST00000396081 TRAV8-4A0A0B4J246 113 aa13.6□□□□□ -0.23
HERPUD2-202ENST00000396081 RHODO00212 210 aa13.6□□□□□ -0.23
HERPUD2-202ENST00000396081 C5orf56Q8N8D9 126 aa13.6□□□□□ -0.23
HERPUD2-202ENST00000396081 NPC2P61916 151 aa13.6□□□□□ -0.23
HERPUD2-202ENST00000396081 CCDC179H3BU77 68 aa13.6□□□□□ -0.23
HERPUD2-202ENST00000396081 SPXQ9BT56 116 aa13.6□□□□□ -0.23
HERPUD2-202ENST00000396081 SOCS3O14543 225 aa13.59□□□□□ -0.23
HERPUD2-202ENST00000396081 LEPROTO15243 131 aa13.59□□□□□ -0.23
HERPUD2-202ENST00000396081 RHPN1-AS1Q9BWJ2 59 aa13.59□□□□□ -0.23
HERPUD2-202ENST00000396081 C15orf53Q8NAA6 179 aa13.59□□□□□ -0.23
HERPUD2-202ENST00000396081 TMEM223A0PJW6 202 aa13.58□□□□□ -0.23
HERPUD2-202ENST00000396081 IFITM1P13164 125 aa13.58□□□□□ -0.23
HERPUD2-202ENST00000396081 GAGE12JA6NER3 117 aa13.58□□□□□ -0.24
HERPUD2-202ENST00000396081 GAGE7O76087 117 aa13.58□□□□□ -0.24
HERPUD2-202ENST00000396081 GAGE12FP0CL80 117 aa13.58□□□□□ -0.24
HERPUD2-202ENST00000396081 GAGE12GP0CL81 117 aa13.58□□□□□ -0.24
HERPUD2-202ENST00000396081 GAGE12IP0CL82 117 aa13.58□□□□□ -0.24
HERPUD2-202ENST00000396081 GAGE4Q13068 117 aa13.58□□□□□ -0.24
HERPUD2-202ENST00000396081 PRRC2AP48634 2157 aaKnown RBP13.58□□□□□ -0.24
HERPUD2-202ENST00000396081 PF4V1P10720 104 aa13.58□□□□□ -0.24
HERPUD2-202ENST00000396081 NPFFO15130 113 aa13.57□□□□□ -0.24
HERPUD2-202ENST00000396081 ZNF22P17026 224 aaPredicted RBP13.57□□□□□ -0.24
HERPUD2-202ENST00000396081 LY6EQ16553 131 aa13.57□□□□□ -0.24
HERPUD2-202ENST00000396081 TRAV12-2A0A075B6T6 113 aa13.57□□□□□ -0.24
HERPUD2-202ENST00000396081 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.57□□□□□ -0.24
HERPUD2-202ENST00000396081 C2orf82Q6UX34 121 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms