RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 BAALC-AS2P0C853 105 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 F6UB75 175 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 BLCAPP62952 87 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 ZNF503Q96F45 646 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 C10orf105Q8TEF2 133 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 MRPL36Q9P0J6 103 aaKnown RBP4.23□□□□□ -1.73
VPS13C-204ENST00000395898 C2orf70A6NJV1 201 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 IGHG2P01859 326 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 GRNP28799 593 aaKnown RBP4.23□□□□□ -1.73
VPS13C-204ENST00000395898 WDR87Q6ZQQ6 2873 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 TM2D2Q9BX73 214 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 Q9HAA7 133 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 NDUFS5O43920 106 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 COA6Q5JTJ3 125 aaKnown RBP4.23□□□□□ -1.73
VPS13C-204ENST00000395898 A0A0J9YY99 117 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 ETDCA0A1B0GVM5 59 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 CRYBA4P53673 196 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 HIST2H2BCQ6DN03 193 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 CAMK2N2Q96S95 79 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 EXPH5Q8NEV8 1989 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 HIVEP2P31629 2446 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 IGKV1-17P01599 117 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 C5orf38Q86SI9 138 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 DEFB105AQ8NG35 78 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 RPL39LQ96EH5 51 aaKnown RBP4.23□□□□□ -1.73
VPS13C-204ENST00000395898 SND1-IT1Q9HBX3 110 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 AMTNQ6UX39 209 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 ZFP2Q6ZN57 461 aa4.23□□□□□ -1.73
VPS13C-204ENST00000395898 TMEM263Q8WUH6 116 aaKnown RBP4.23□□□□□ -1.73
VPS13C-204ENST00000395898 Q6ZQT7 251 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 TOMM6Q96B49 74 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-204ENST00000395898 PTPRSQ13332 1948 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 TINCRA0A1B0GVN0 87 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 JMJD7-PLA2G4BH0Y9G9 81 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 ADORA2A-AS1P86434 159 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 TMEM256-PLSCR3K7ERE1 68 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 K7ERJ3 54 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 COX7B2Q8TF08 81 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 ANKHD1Q8IWZ3 2542 aaKnown RBP4.22□□□□□ -1.73
VPS13C-204ENST00000395898 PTPRBP23467 1997 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 IGLV1-47P01700 117 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 TMEM258P61165 79 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 HIGD2BQ4VC39 106 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 SPRNQ5BIV9 151 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 WIPF3A6NGB9 483 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 RITA1Q96K30 269 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 NDUFB1O75438 58 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 WT1P19544 449 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-204ENST00000395898 C15orf53Q8NAA6 179 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 Q8N1Y9 231 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 DEFB125Q8N687 156 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 FAM167A-AS1Q96KT0 104 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 TIMM17AQ99595 171 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 AGRNO00468 2067 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 IGHV4OR15-8A0A075B7B6 117 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 A0A087WW49 117 aa4.22□□□□□ -1.73
VPS13C-204ENST00000395898 KLK5Q9Y337 293 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-204ENST00000395898 TRAV4A0A0B4J268 109 aa4.21□□□□□ -1.73
VPS13C-204ENST00000395898 TRBV6-1A0A0K0K1D8 114 aa4.21□□□□□ -1.73
VPS13C-204ENST00000395898 CTRLP40313 264 aa4.21□□□□□ -1.73
VPS13C-204ENST00000395898 ODF3L1Q8IXM7 274 aa4.21□□□□□ -1.73
VPS13C-204ENST00000395898 BAALCQ8WXS3 180 aa4.21□□□□□ -1.73
VPS13C-204ENST00000395898 TEX22C9J3V5 150 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 ASPHD1Q5U4P2 390 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 PCP2Q8IVA1 136 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 ADAMTS20P59510 1910 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 ZFHX2Q9C0A1 2572 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-204ENST00000395898 KIR2DL5BA0A0G2JN68 375 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 KIR2DL5BA0A0G2JPC4 375 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 NPSP0C0P6 89 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 C4orf48Q5BLP8 95 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 KIR2DL5AQ8N109 375 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 TRBV10-1A0A0K0K1A3 114 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 IL17DQ8TAD2 202 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 FGF23Q9GZV9 251 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-204ENST00000395898 E9PLD3 99 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 MYCNOSP40205 109 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 NDUFA1O15239 70 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 TIRAPP58753 221 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 COL5A1P20908 1838 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-204ENST00000395898 C11orf86A6NJI1 115 aa4.21□□□□□ -1.74
VPS13C-204ENST00000395898 HIGD1BQ9P298 99 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 NTN5Q8WTR8 489 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-204ENST00000395898 GTSF1Q8WW33 167 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 IGLV2-14P01704 120 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 IGLV2-23P01705 113 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 SMAD5-AS1Q9Y6J3 95 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 IGLV10-54A0A075B6I4 117 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 SEM1Q6ZVN7 128 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 VSIG2Q96IQ7 327 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 IGHV1-58A0A0C4DH39 117 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 FSTL3O95633 263 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 CCL25O15444 150 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 MAJINQ3KP22 176 aa4.2□□□□□ -1.74
VPS13C-204ENST00000395898 A0A0B4J2C4 111 aa4.19□□□□□ -1.74
VPS13C-204ENST00000395898 A4D1N5 150 aa4.19□□□□□ -1.74
VPS13C-204ENST00000395898 LYPD6Q86Y78 171 aa4.19□□□□□ -1.74
VPS13C-204ENST00000395898 ODF3Q96PU9 254 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms