RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 Q8N6K4 173 aa12.6□□□□□ -0.39
SCN3B-202ENST00000392770 MDFICQ9P1T7 246 aa12.6□□□□□ -0.39
SCN3B-202ENST00000392770 EML5Q05BV3 1969 aa12.6□□□□□ -0.39
SCN3B-202ENST00000392770 C20orf173Q96LM9 149 aa12.6□□□□□ -0.39
SCN3B-202ENST00000392770 LGALS9O00182 355 aa12.59□□□□□ -0.39
SCN3B-202ENST00000392770 XCL1P47992 114 aa12.59□□□□□ -0.39
SCN3B-202ENST00000392770 ZFAND3Q9H8U3 227 aa12.59□□□□□ -0.39
SCN3B-202ENST00000392770 C9JAW5 83 aa12.59□□□□□ -0.39
SCN3B-202ENST00000392770 CRLF1O75462 422 aa12.59□□□□□ -0.39
SCN3B-202ENST00000392770 NXPH4O95158 308 aa12.59□□□□□ -0.39
SCN3B-202ENST00000392770 TAL2Q16559 108 aa12.59□□□□□ -0.39
SCN3B-202ENST00000392770 LAMTOR3Q9UHA4 124 aa12.59□□□□□ -0.39
SCN3B-202ENST00000392770 PCP2Q8IVA1 136 aa12.58□□□□□ -0.39
SCN3B-202ENST00000392770 K7ERJ3 54 aa12.58□□□□□ -0.4
SCN3B-202ENST00000392770 DAZ2Q13117 558 aaKnown RBP12.58□□□□□ -0.4
SCN3B-202ENST00000392770 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
SCN3B-202ENST00000392770 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
SCN3B-202ENST00000392770 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.4
SCN3B-202ENST00000392770 C10orf99Q6UWK7 81 aa12.58□□□□□ -0.4
SCN3B-202ENST00000392770 LINC01545Q5VT33 79 aa12.57□□□□□ -0.4
SCN3B-202ENST00000392770 CITED1Q99966 193 aa12.57□□□□□ -0.4
SCN3B-202ENST00000392770 RPL39P62891 51 aaKnown RBP12.57□□□□□ -0.4
SCN3B-202ENST00000392770 TOMM6Q96B49 74 aa12.57□□□□□ -0.4
SCN3B-202ENST00000392770 KIAA1549Q9HCM3 1950 aa12.57□□□□□ -0.4
SCN3B-202ENST00000392770 SPART-AS1P0CW21 52 aa12.57□□□□□ -0.4
SCN3B-202ENST00000392770 TP53TG3Q9ULZ0 132 aa12.57□□□□□ -0.4
SCN3B-202ENST00000392770 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
SCN3B-202ENST00000392770 ATP6V0E2Q8NHE4 81 aa12.56□□□□□ -0.4
SCN3B-202ENST00000392770 KIR2DL5BA0A0G2JN68 375 aa12.56□□□□□ -0.4
SCN3B-202ENST00000392770 KIR2DL5BA0A0G2JPC4 375 aa12.56□□□□□ -0.4
SCN3B-202ENST00000392770 KIR2DL5AQ8N109 375 aa12.56□□□□□ -0.4
SCN3B-202ENST00000392770 ATP5G1P05496 136 aa12.55□□□□□ -0.4
SCN3B-202ENST00000392770 A0A1B0GXF2 115 aa12.55□□□□□ -0.4
SCN3B-202ENST00000392770 ICOSQ9Y6W8 199 aa12.55□□□□□ -0.4
SCN3B-202ENST00000392770 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
SCN3B-202ENST00000392770 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
SCN3B-202ENST00000392770 DEFB135Q30KP9 77 aa12.54□□□□□ -0.4
SCN3B-202ENST00000392770 TDRG1Q3Y452 100 aa12.54□□□□□ -0.4
SCN3B-202ENST00000392770 SCRT2Q9NQ03 307 aa12.54□□□□□ -0.4
SCN3B-202ENST00000392770 ESM1Q9NQ30 184 aa12.54□□□□□ -0.4
SCN3B-202ENST00000392770 SPTAN1Q13813 2472 aaKnown RBP12.54□□□□□ -0.4
SCN3B-202ENST00000392770 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
SCN3B-202ENST00000392770 BAALCQ8WXS3 180 aa12.54□□□□□ -0.4
SCN3B-202ENST00000392770 ADAMTS20P59510 1910 aa12.54□□□□□ -0.4
SCN3B-202ENST00000392770 RMI2Q96E14 147 aa12.54□□□□□ -0.4
SCN3B-202ENST00000392770 INAFM1C9JVW0 142 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 Q6ZSV7 163 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 PRO1854Q9UHT4 67 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 TRBV7-3A0A075B6L6 115 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 DEFB4AO15263 64 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 ZNF702PQ9H963 129 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 GDF5OSQ5U4N7 250 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 Q9H8V8 135 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 FGF6P10767 208 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 HHLA3Q9XRX5 114 aa12.53□□□□□ -0.4
SCN3B-202ENST00000392770 TMEM263Q8WUH6 116 aaKnown RBP12.53□□□□□ -0.4
SCN3B-202ENST00000392770 HIST2H2BDQ6DRA6 164 aa12.52□□□□□ -0.4
SCN3B-202ENST00000392770 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.4
SCN3B-202ENST00000392770 K7EQG2 157 aa12.52□□□□□ -0.41
SCN3B-202ENST00000392770 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.41
SCN3B-202ENST00000392770 ODF3Q96PU9 254 aa12.52□□□□□ -0.41
SCN3B-202ENST00000392770 ANKRD39Q53RE8 183 aa12.52□□□□□ -0.41
SCN3B-202ENST00000392770 NKAPP1Q8N9T2 125 aa12.52□□□□□ -0.41
SCN3B-202ENST00000392770 INSL3P51460 131 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 A0A0J9YXV3 536 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 A0A1W2PPM0 123 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 K7EP34 96 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 DSCAMO60469 2012 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 IGKV2D-24A0A075B6R9 120 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 PSMB8P28062 276 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 DEFB114Q30KQ6 69 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 TRBV20-1A0A075B6N2 111 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 IGLC6P0CF74 106 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
SCN3B-202ENST00000392770 C5orf38Q86SI9 138 aa12.5□□□□□ -0.41
SCN3B-202ENST00000392770 MED13LQ71F56 2210 aa12.5□□□□□ -0.41
SCN3B-202ENST00000392770 Q6ZS46 218 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 PSMG3-AS1Q96PY0 264 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 ABCA1O95477 2261 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 BOD1L2Q8IYS8 172 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 TRAV13-2A0A0B4J235 113 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 H3BMM0 161 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 GAGE2AQ6NT46 116 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 UBE2WQ96B02 151 aa12.49□□□□□ -0.41
SCN3B-202ENST00000392770 IGHV3-30P01768 117 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 IGHV3-33P01772 117 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 IGHV3-30-5P0DP03 117 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 PLA2G2AP14555 144 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 CRIP1P50238 77 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 GTSF1LQ9H1H1 148 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 TRAV4A0A0B4J268 109 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 UTRNP46939 3433 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 PLCE1Q9P212 2302 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 LY6G6DO95868 133 aa12.48□□□□□ -0.41
SCN3B-202ENST00000392770 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 IGLV10-54A0A075B6I4 117 aa12.47□□□□□ -0.41
SCN3B-202ENST00000392770 PRSS47A8MTI9 375 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms