RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 RPL37AP61513 92 aaKnown RBP0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 UBE2L3P68036 154 aaKnown RBP0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 CCL8P80075 99 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 DCDP81605 110 aaKnown RBP0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 INSL4Q14641 139 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 S100A7L2Q5SY68 101 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 PP632Q6XCG6 107 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 SBSPONQ8IVN8 264 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 IFI27L1Q96BM0 104 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 DSCR8Q96T75 97 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 AMELYQ99218 206 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 RB1CC1Q8TDY2 1594 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 RP1P56715 2156 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 AKAP12Q02952 1782 aa0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 RBBP6Q7Z6E9 1792 aaKnown RBP0.73□□□□□ -2.29
TRAJ39-201ENST00000390498 FN1P02751 2386 aaKnown RBP0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 C10orf71Q711Q0 1435 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 PHRF1Q9P1Y6 1649 aaKnown RBP0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 IGKV2-40A0A087WW87 121 aaPredicted RBP0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 TRAV13-2A0A0B4J235 113 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 IGKV2D-40P01614 121 aaPredicted RBP0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 S100A10P60903 97 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 RBM3P98179 157 aaKnown RBP0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 KRTAP6-3Q3LI67 103 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 COL5A1-AS1Q5SY13 56 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 NCMAPQ5T1S8 102 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 ZNF818PQ6ZRF7 136 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 CYP2G1PQ6ZSU1 146 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 COMMD6Q7Z4G1 85 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 MED12LQ86YW9 2145 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 SPTSSBQ8NFR3 76 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 C10orf82Q8WW14 230 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 DPH3P1Q9H4G8 78 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 AP4S1Q9Y587 144 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 ARHGAP5Q13017 1502 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 DLEC1Q9Y238 1755 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 ICE1Q9Y2F5 2266 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 NWD2Q9ULI1 1742 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 ANKRD26Q9UPS8 1709 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 MCM3APO60318 1980 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 PCDH15Q96QU1 1955 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 BLMP54132 1417 aaPredicted RBP0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 ALPK2Q86TB3 2170 aa0.72□□□□□ -2.29
TRAJ39-201ENST00000390498 SHROOM2Q13796 1616 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 CC2D2AQ9P2K1 1620 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 HCG22E2RYF7 251 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 SIX6O95475 246 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 TFF1P04155 84 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 UBE2D1P51668 147 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 XAF1Q6GPH4 301 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 PPP1R1CQ8WVI7 109 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 OBSCN-AS1Q96MR7 158 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 SNHG12Q9BXW3 62 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 CYP4F30PQ9H0H9 118 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 TNS1Q9HBL0 1735 aaKnown RBP0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 ADGRL2O95490 1459 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 GAPVD1Q14C86 1478 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 TEX14Q8IWB6 1497 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 PXDNQ92626 1479 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 FYCO1Q9BQS8 1478 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 RAPGEF2Q9Y4G8 1499 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 HEATR1Q9H583 2144 aaKnown RBP0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 COL4A1P02462 1669 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 RREB1Q92766 1687 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 CASKIN1Q8WXD9 1431 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 NSD3Q9BZ95 1437 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 LRRC37A3O60309 1634 aa0.71□□□□□ -2.3
TRAJ39-201ENST00000390498 RTTNQ86VV8 2226 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 DIDO1Q9BTC0 2240 aaKnown RBP0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 BAZ2BQ9UIF8 2168 aaKnown RBP0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 PEAK1Q9H792 1746 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 TOPAZ1Q8N9V7 1692 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 TRBV7-1A0A0A6YYK4 115 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 NBDYA0A0U1RRE5 68 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 PVALEFA0A1B0GWK0 134 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 RBAKDNA6NC62 111 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 MPC2O95563 127 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 LINC00032P0C843 101 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 CCL3L1P16619 93 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 FXYD4P59646 89 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 KRTAP12-1P59990 96 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 FXYD3Q14802 87 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 DEFB119Q8N690 84 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 MYOZ3Q8TDC0 251 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 DPY30Q9C005 99 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 COL5A1P20908 1838 aaPredicted RBP0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 CACNA1GO43497 2377 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 PPIP5K1Q6PFW1 1433 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 SCAPERQ9BY12 1400 aa0.7□□□□□ -2.3
TRAJ39-201ENST00000390498 ARAP2Q8WZ64 1704 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 ABCA3Q99758 1704 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 NRXN2Q9P2S2 1712 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 BAHCC1Q9P281 2608 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 E9PCH4 1651 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 DOCK10Q96BY6 2186 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 PATJQ8NI35 1801 aa0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 MAGI1Q96QZ7 1491 aaPredicted RBP0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 TNRC6AQ8NDV7 1962 aaKnown RBP0.69□□□□□ -2.3
TRAJ39-201ENST00000390498 EXPH5Q8NEV8 1989 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms