RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TRAV17A0A0B4J275 112 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 TRBV10-2A0A0K0K1G8 114 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 MUC21A0A140T8X8 626 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 hDV103S1A0JD37 113 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 C7orf77A4D0Y5 90 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 HMSDA8MTL9 139 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 C17orf112F2Z3M2 114 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 SYS1-DBNDD2H3BUS1 97 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 CCL16O15467 120 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 PIPP12273 146 aaPredicted RBP1.03□□□□□ -2.24
TRAV40-201ENST00000390467 ZNF22P17026 224 aaPredicted RBP1.03□□□□□ -2.24
TRAV40-201ENST00000390467 ZNF117Q03924 483 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 ZNF345Q14585 488 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 RHOHQ15669 191 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 ESRGQ1W209 222 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 SPATA45Q537H7 98 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 C1orf134Q5TEV5 83 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 SPANXN1Q5VSR9 72 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 Q6ZQT0 140 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 Q6ZS52 159 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 RPRMLQ8N4K4 120 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 SERP2Q8N6R1 65 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 TMEM141Q96I45 108 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 LINC01600Q96MT4 127 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 OR8B2Q96RD0 313 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 TRGV9Q99603 122 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 MGST2Q99735 147 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 CYSTM1Q9H1C7 97 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 NDUFB11Q9NX14 153 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 NHP2Q9NX24 153 aaKnown RBP1.03□□□□□ -2.24
TRAV40-201ENST00000390467 MRPL35Q9NZE8 188 aaKnown RBP1.03□□□□□ -2.24
TRAV40-201ENST00000390467 NDUFA12Q9UI09 145 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 TRAPPC1Q9Y5R8 145 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 RIC1Q4ADV7 1423 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 PXDNQ92626 1479 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 UGGT2Q9NYU1 1516 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 KNDC1Q76NI1 1749 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 RGPD4Q7Z3J3 1758 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 KIDINS220Q9ULH0 1771 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 BAHCC1Q9P281 2608 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 A0A087WWC5 75 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 LOC107984156A0A0G2JMH3 177 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 TMEM235A6NFC5 223 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 H3BPC8 53 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 H3BQ85 93 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 H3BUT2 72 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 H7C2G1 150 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 TET3O43151 1660 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 SPTBP11277 2137 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 DEFA4P12838 97 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 MPV17P39210 176 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 BLMP54132 1417 aaPredicted RBP1.02□□□□□ -2.25
TRAV40-201ENST00000390467 KRTAP12-1P59990 96 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 KRTDAPP60985 99 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 UBE2G1P62253 170 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 GOLGA3Q08378 1498 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 MYO7AQ13402 2215 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 ESPL1Q14674 2120 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 NNATQ16517 81 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 DOCK11Q5JSL3 2073 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 S100A7L2Q5SY68 101 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 PRR14LQ5THK1 2151 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 FAM27BQ5VT28 67 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 LYPD5Q6UWN5 251 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 MON2Q7Z3U7 1717 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 ARL17AQ8IVW1 177 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 MROH1Q8NDA8 1641 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 OR8B3Q8NGG8 313 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 DYNLRB2Q8TF09 96 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 MUCL1Q96DR8 90 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 ODF3Q96PU9 254 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 SMIM7Q9BQ49 75 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 FANCD2Q9BXW9 1451 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 HEATR1Q9H583 2144 aaKnown RBP1.02□□□□□ -2.25
TRAV40-201ENST00000390467 HIGD1BQ9P298 99 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 TIMM9Q9Y5J7 89 aa1.02□□□□□ -2.25
TRAV40-201ENST00000390467 ZGRF1Q86YA3 2104 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 TRPM7Q96QT4 1865 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 PATJQ8NI35 1801 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 RGPD3A6NKT7 1758 aaPredicted RBP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 PREX2Q70Z35 1606 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 MADDQ8WXG6 1647 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 ABCA8O94911 1581 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 LAMC3Q9Y6N6 1575 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 ABCC2Q92887 1545 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 ATP10BO94823 1461 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 EDC4Q6P2E9 1401 aaKnown RBP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 A0A087WSZ3 146 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 TRAV2A0A0B4J234 112 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 TRAV3A0A0B4J244 114 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 PIGBOS1A0A0B4J2F0 54 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 IGHV1-18A0A0C4DH31 117 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 TCRBV4S1A1TA0A5B7 111 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 NAP1L6A6NFF2 107 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 C11orf86A6NJI1 115 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 E7EUB6 86 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 C5orf67F2Z3F1 127 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 H7BZZ5 65 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 SIX6O95475 246 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms