RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 RAX2Q96IS3 184 aa12.25□□□□□ -0.45
TNIP1-202ENST00000389378 RHPN1-AS1Q9BWJ2 59 aa12.25□□□□□ -0.45
TNIP1-202ENST00000389378 SOCS3O14543 225 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 TCL1BO95988 128 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 LENEPQ9Y5L5 61 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 SCGB1A1P11684 91 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 NDUFA11Q86Y39 141 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 ZNRF2Q8NHG8 242 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 CLUHP3Q96NS8 147 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 LINC00315P59091 139 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 CDIP1Q9H305 208 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 MOB4Q9Y3A3 225 aa12.24□□□□□ -0.45
TNIP1-202ENST00000389378 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 LINC01619G3V211 115 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 BLCAPP62952 87 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 NOTCH3Q9UM47 2321 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 TRAV12-2A0A075B6T6 113 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 CFC1BP0CG36 223 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 CFC1P0CG37 223 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 KIR2DL4Q99706 377 aa12.23□□□□□ -0.45
TNIP1-202ENST00000389378 USP9YO00507 2555 aaPredicted RBP12.22□□□□□ -0.45
TNIP1-202ENST00000389378 CSMD2Q7Z408 3487 aa12.22□□□□□ -0.45
TNIP1-202ENST00000389378 IGIPA6NJ69 53 aa12.22□□□□□ -0.45
TNIP1-202ENST00000389378 PMVKQ15126 192 aa12.22□□□□□ -0.45
TNIP1-202ENST00000389378 CARD19Q96LW7 228 aa12.22□□□□□ -0.45
TNIP1-202ENST00000389378 HERVK_113P61574 105 aa12.22□□□□□ -0.45
TNIP1-202ENST00000389378 KIF25-AS1Q9Y6Z4 181 aa12.21□□□□□ -0.45
TNIP1-202ENST00000389378 FAM223BA6NKX1 122 aa12.21□□□□□ -0.45
TNIP1-202ENST00000389378 KLK9Q2XQG4 91 aa12.21□□□□□ -0.45
TNIP1-202ENST00000389378 FAM223AQ8IWN6 122 aa12.21□□□□□ -0.45
TNIP1-202ENST00000389378 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.45
TNIP1-202ENST00000389378 NDUFA4O00483 81 aa12.21□□□□□ -0.46
TNIP1-202ENST00000389378 XGP55808 180 aa12.21□□□□□ -0.46
TNIP1-202ENST00000389378 CENPEQ02224 2701 aa12.2□□□□□ -0.46
TNIP1-202ENST00000389378 POLR2KP53803 58 aaKnown RBP12.2□□□□□ -0.46
TNIP1-202ENST00000389378 UBE2D3P61077 147 aa12.2□□□□□ -0.46
TNIP1-202ENST00000389378 UBE2D2P62837 147 aa12.2□□□□□ -0.46
TNIP1-202ENST00000389378 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
TNIP1-202ENST00000389378 IGHV3-30P01768 117 aa12.19□□□□□ -0.46
TNIP1-202ENST00000389378 IGHV3-30-5P0DP03 117 aa12.19□□□□□ -0.46
TNIP1-202ENST00000389378 ZNF56Q15929 161 aa12.19□□□□□ -0.46
TNIP1-202ENST00000389378 ZNF580Q9UK33 172 aa12.19□□□□□ -0.46
TNIP1-202ENST00000389378 TRAV26-1A0A087WT03 109 aa12.19□□□□□ -0.46
TNIP1-202ENST00000389378 IGHV4-38-2P0DP08 117 aa12.19□□□□□ -0.46
TNIP1-202ENST00000389378 TMEM95Q3KNT9 176 aa12.19□□□□□ -0.46
TNIP1-202ENST00000389378 TRAV2A0A0B4J234 112 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 ADARB2-AS1A8MUL3 147 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 H3BUX3 64 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 J3QQQ9 107 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 VCYO14598 125 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 ZNF688P0C7X2 276 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
TNIP1-202ENST00000389378 TRPT1Q86TN4 253 aaKnown RBP12.18□□□□□ -0.46
TNIP1-202ENST00000389378 GEMIN7Q9H840 131 aaKnown RBP12.18□□□□□ -0.46
TNIP1-202ENST00000389378 ZANQ9Y493 2812 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 LGALS3P17931 250 aaKnown RBP12.18□□□□□ -0.46
TNIP1-202ENST00000389378 FAM19A4Q96LR4 140 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 NACAE9PAV3 2078 aa12.18□□□□□ -0.46
TNIP1-202ENST00000389378 C19orf54Q5BKX5 351 aa12.17□□□□□ -0.46
TNIP1-202ENST00000389378 A4D1N5 150 aa12.17□□□□□ -0.46
TNIP1-202ENST00000389378 PPP1R17O96001 155 aa12.17□□□□□ -0.46
TNIP1-202ENST00000389378 HTN1P15515 57 aa12.17□□□□□ -0.46
TNIP1-202ENST00000389378 BEX4Q9NWD9 120 aaPredicted RBP12.17□□□□□ -0.46
TNIP1-202ENST00000389378 Q6ZUT4 128 aa12.17□□□□□ -0.46
TNIP1-202ENST00000389378 ANKRD29Q8N6D5 301 aa12.17□□□□□ -0.46
TNIP1-202ENST00000389378 SLC25A29Q8N8R3 303 aa12.17□□□□□ -0.46
TNIP1-202ENST00000389378 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
TNIP1-202ENST00000389378 UTP20O75691 2785 aaKnown RBP12.16□□□□□ -0.46
TNIP1-202ENST00000389378 A8MWV9 139 aa12.16□□□□□ -0.46
TNIP1-202ENST00000389378 KLRB1Q12918 225 aa12.16□□□□□ -0.46
TNIP1-202ENST00000389378 TEN1Q86WV5 123 aa12.16□□□□□ -0.46
TNIP1-202ENST00000389378 PRO1854Q9UHT4 67 aa12.16□□□□□ -0.46
TNIP1-202ENST00000389378 POLQO75417 2590 aa12.16□□□□□ -0.46
TNIP1-202ENST00000389378 IGHV1-69DA0A0B4J2H0 117 aa12.15□□□□□ -0.46
TNIP1-202ENST00000389378 IGHV1-69P01742 117 aa12.15□□□□□ -0.46
TNIP1-202ENST00000389378 PPDPFLQ8WWR9 84 aa12.15□□□□□ -0.46
TNIP1-202ENST00000389378 C2CD3Q4AC94 2353 aa12.15□□□□□ -0.46
TNIP1-202ENST00000389378 IGHV4OR15-8A0A075B7B6 117 aa12.15□□□□□ -0.46
TNIP1-202ENST00000389378 A0A087WW49 117 aa12.15□□□□□ -0.46
TNIP1-202ENST00000389378 IGHV3-73A0A0B4J1V6 119 aa12.15□□□□□ -0.46
TNIP1-202ENST00000389378 C9JAW5 83 aa12.15□□□□□ -0.46
TNIP1-202ENST00000389378 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
TNIP1-202ENST00000389378 CRYBA4P53673 196 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 ZNF876PQ49A33 203 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 AMELXQ99217 191 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 DAZ1Q9NQZ3 744 aaKnown RBP12.14□□□□□ -0.47
TNIP1-202ENST00000389378 MED14OSP0DP75 135 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 Q1RN00 199 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 RNASE13Q5GAN3 156 aaKnown RBP12.14□□□□□ -0.47
TNIP1-202ENST00000389378 PAPPA-AS1Q5QFB9 102 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 KLLNB2CW77 178 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 C10orf99Q6UWK7 81 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 ATP6V0E2Q8NHE4 81 aa12.14□□□□□ -0.47
TNIP1-202ENST00000389378 FLNCQ14315 2725 aa12.13□□□□□ -0.47
TNIP1-202ENST00000389378 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
TNIP1-202ENST00000389378 TMEM141Q96I45 108 aa12.13□□□□□ -0.47
TNIP1-202ENST00000389378 ITPR1Q14643 2758 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms