RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 SRP19P09132 144 aaKnown RBP7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 MSRB1Q9NZV6 116 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 ZNF479Q96JC4 524 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 A0A0G2JRQ6 117 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 SMKR1H3BMG3 65 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 C18orf65Q6ZTR6 163 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 WFDC10AQ9H1F0 79 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 GTSF1LQ9H1H1 148 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 TRBV7-3A0A075B6L6 115 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 A0A096LNI7 61 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 FAM19A5Q7Z5A7 132 aaPredicted RBP7□□□□□ -1.29
LIMCH1-202ENST00000381753 QRFPP83859 136 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 MDFIQ99750 246 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 GNB1LQ9BYB4 327 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 IGLC7A0M8Q6 106 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 SOCS3O14543 225 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
LIMCH1-202ENST00000381753 CRYGCP07315 174 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 UNQ9165/PRO28630Q6UXU0 137 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 A8MWP6 167 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 TDRG1Q3Y452 100 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 MPV17L2Q567V2 206 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 GAGE2AQ6NT46 116 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 TMEM170AQ8WVE7 144 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 TMEM141Q96I45 108 aa7□□□□□ -1.29
LIMCH1-202ENST00000381753 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
LIMCH1-202ENST00000381753 EGR2P11161 476 aaPredicted RBP6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 SERF1AO75920 110 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 HSD52Q0P140 79 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 ARTNQ5T4W7 220 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 Q6ZS49 121 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 C22orf34Q6ZV56 151 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 MED13Q9UHV7 2174 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 PHF3Q92576 2039 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 DYNAPQ8N1N2 210 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 Q8N1Y9 231 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 ANAPC13Q9BS18 74 aa6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 FNDC4Q9H6D8 234 aaPredicted RBP6.99□□□□□ -1.29
LIMCH1-202ENST00000381753 LTAP01374 205 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 IGLV1-47P01700 117 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 CT83Q5H943 113 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 C17orf77Q96MU5 243 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 DSCR8Q96T75 97 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 ZNF492Q9P255 531 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 LRRK1Q38SD2 2015 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 TEX22C9J3V5 150 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 REG3AQ06141 175 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 OCC1Q8TAD7 63 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 SIGMAR1Q99720 223 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 TMEM14CQ9P0S9 112 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 OBSL1O75147 1896 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 LY6G6FQ5SQ64 297 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 Q6ZTI0 123 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 LINC00269Q8N2A0 174 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 AVPP01185 164 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 AGPAT4-IT1Q9H0P7 198 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 LAMTOR2Q9Y2Q5 125 aa6.98□□□□□ -1.29
LIMCH1-202ENST00000381753 KIAA2026Q5HYC2 2103 aa6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 Q9H8V8 135 aa6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 TNCP24821 2201 aa6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 AMN1Q8IY45 258 aa6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 SLC25A29Q8N8R3 303 aa6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 CEMP1Q6PRD7 247 aaPredicted RBP6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 AGMATQ9BSE5 352 aa6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 LENEPQ9Y5L5 61 aa6.97□□□□□ -1.29
LIMCH1-202ENST00000381753 RS1O15537 224 aa6.96□□□□□ -1.29
LIMCH1-202ENST00000381753 SAMD5Q5TGI4 173 aa6.96□□□□□ -1.29
LIMCH1-202ENST00000381753 A0A0J9YX75 114 aa6.96□□□□□ -1.29
LIMCH1-202ENST00000381753 CCL25O15444 150 aa6.96□□□□□ -1.29
LIMCH1-202ENST00000381753 MSMPQ1L6U9 139 aa6.96□□□□□ -1.29
LIMCH1-202ENST00000381753 LINC01551Q86U37 167 aa6.96□□□□□ -1.29
LIMCH1-202ENST00000381753 UBL5Q9BZL1 73 aa6.96□□□□□ -1.29
LIMCH1-202ENST00000381753 TMEM14EPQ6UXP3 125 aa6.96□□□□□ -1.3
LIMCH1-202ENST00000381753 ANAPC1Q9H1A4 1944 aa6.96□□□□□ -1.3
LIMCH1-202ENST00000381753 PRSS47A8MTI9 375 aa6.96□□□□□ -1.3
LIMCH1-202ENST00000381753 PCP2Q8IVA1 136 aa6.96□□□□□ -1.3
LIMCH1-202ENST00000381753 IGKV1D-37A0A075B6S9 117 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 OCIAD2Q56VL3 154 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 CLUHP3Q96NS8 147 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 NCKAP5O14513 1909 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 DOPEY1Q5JWR5 2465 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 MLST8Q9BVC4 326 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 FGF23Q9GZV9 251 aaPredicted RBP6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 K7EIM0 57 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 GUSBP1Q15486 140 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 C2orf66Q6UXQ4 117 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 BAALCQ8WXS3 180 aa6.95□□□□□ -1.3
LIMCH1-202ENST00000381753 HELZP42694 1942 aaKnown RBP6.94□□□□□ -1.3
LIMCH1-202ENST00000381753 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
LIMCH1-202ENST00000381753 FASNP49327 2511 aaKnown RBP6.94□□□□□ -1.3
LIMCH1-202ENST00000381753 HAMPP81172 84 aa6.94□□□□□ -1.3
LIMCH1-202ENST00000381753 I3L2K1 104 aa6.94□□□□□ -1.3
LIMCH1-202ENST00000381753 FHL3Q13643 280 aa6.94□□□□□ -1.3
LIMCH1-202ENST00000381753 TMEM213A2RRL7 107 aa6.94□□□□□ -1.3
LIMCH1-202ENST00000381753 NCR3O14931 201 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms