RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 SAMD10Q9BYL1 202 aa11.45□□□□□ -0.58
HMGN1-204ENST00000380749 DAZ3Q9NR90 486 aaKnown RBP11.45□□□□□ -0.58
HMGN1-204ENST00000380749 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
HMGN1-204ENST00000380749 SEC11BP0C7V7 166 aa11.44□□□□□ -0.58
HMGN1-204ENST00000380749 TPT1P13693 172 aaKnown RBP11.44□□□□□ -0.58
HMGN1-204ENST00000380749 COX8CQ7Z4L0 72 aa11.44□□□□□ -0.58
HMGN1-204ENST00000380749 RMI2Q96E14 147 aa11.44□□□□□ -0.58
HMGN1-204ENST00000380749 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
HMGN1-204ENST00000380749 GRIFINA4D1Z8 144 aa11.43□□□□□ -0.58
HMGN1-204ENST00000380749 STOML3Q8TAV4 291 aa11.43□□□□□ -0.58
HMGN1-204ENST00000380749 M0R381 172 aa11.42□□□□□ -0.58
HMGN1-204ENST00000380749 CRIP1P50238 77 aa11.42□□□□□ -0.58
HMGN1-204ENST00000380749 WFDC2Q14508 124 aa11.42□□□□□ -0.58
HMGN1-204ENST00000380749 ZFP82Q8N141 532 aa11.42□□□□□ -0.58
HMGN1-204ENST00000380749 Q9UF83 564 aa11.42□□□□□ -0.58
HMGN1-204ENST00000380749 A0A087WWL8 130 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 TRBV6-1A0A0K0K1D8 114 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 LECT2O14960 151 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 ARPC5O15511 151 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 AKR1C3P42330 323 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 FHITP49789 147 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 CST9LP1Q5W188 147 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 SFRP2Q96HF1 295 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 TMSB15BA0A087X1C1 80 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 LTAP01374 205 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 ZNF674Q2M3X9 581 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 KCNIP4Q6PIL6 250 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 NIT1Q86X76 327 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 FAM30AQ9NZY2 134 aa11.41□□□□□ -0.58
HMGN1-204ENST00000380749 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.4□□□□□ -0.59
HMGN1-204ENST00000380749 TRBV10-1A0A0K0K1A3 114 aa11.4□□□□□ -0.59
HMGN1-204ENST00000380749 RPL36AP83881 106 aaKnown RBP11.4□□□□□ -0.59
HMGN1-204ENST00000380749 RPL36ALQ969Q0 106 aaKnown RBP11.4□□□□□ -0.59
HMGN1-204ENST00000380749 CHCHD7Q9BUK0 85 aa11.4□□□□□ -0.59
HMGN1-204ENST00000380749 IGKV2D-24A0A075B6R9 120 aa11.39□□□□□ -0.59
HMGN1-204ENST00000380749 A0A087WX48 190 aa11.39□□□□□ -0.59
HMGN1-204ENST00000380749 G3V3Q6 166 aa11.39□□□□□ -0.59
HMGN1-204ENST00000380749 ELOBQ15370 118 aa11.39□□□□□ -0.59
HMGN1-204ENST00000380749 Q6ZSA8 131 aa11.39□□□□□ -0.59
HMGN1-204ENST00000380749 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
HMGN1-204ENST00000380749 PLA2G1BP04054 148 aaKnown RBP11.38□□□□□ -0.59
HMGN1-204ENST00000380749 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
HMGN1-204ENST00000380749 KLK12Q9UKR0 248 aa11.38□□□□□ -0.59
HMGN1-204ENST00000380749 PKHD1L1Q86WI1 4243 aa11.37□□□□□ -0.59
HMGN1-204ENST00000380749 Q8N976 141 aa11.37□□□□□ -0.59
HMGN1-204ENST00000380749 UBE2WQ96B02 151 aa11.37□□□□□ -0.59
HMGN1-204ENST00000380749 TRBV7-3A0A075B6L6 115 aa11.36□□□□□ -0.59
HMGN1-204ENST00000380749 PFDN1O60925 122 aa11.36□□□□□ -0.59
HMGN1-204ENST00000380749 UBE2D3P61077 147 aa11.36□□□□□ -0.59
HMGN1-204ENST00000380749 UBE2D2P62837 147 aa11.36□□□□□ -0.59
HMGN1-204ENST00000380749 RGS21Q2M5E4 152 aa11.36□□□□□ -0.59
HMGN1-204ENST00000380749 RBFOX3A6NFN3 312 aa11.35□□□□□ -0.59
HMGN1-204ENST00000380749 PAGE4O60829 102 aa11.35□□□□□ -0.59
HMGN1-204ENST00000380749 S100A9P06702 114 aaKnown RBP11.35□□□□□ -0.59
HMGN1-204ENST00000380749 ZNF345Q14585 488 aa11.35□□□□□ -0.59
HMGN1-204ENST00000380749 ZNF56Q15929 161 aa11.35□□□□□ -0.59
HMGN1-204ENST00000380749 LINC00528Q8N1L1 170 aa11.35□□□□□ -0.59
HMGN1-204ENST00000380749 CXCL1P09341 107 aa11.34□□□□□ -0.59
HMGN1-204ENST00000380749 Q0VG73 95 aa11.34□□□□□ -0.59
HMGN1-204ENST00000380749 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-204ENST00000380749 OR10G8Q8NGN5 311 aa11.34□□□□□ -0.59
HMGN1-204ENST00000380749 FAM213BQ8TBF2 198 aa11.34□□□□□ -0.59
HMGN1-204ENST00000380749 SFT2D1Q8WV19 159 aa11.34□□□□□ -0.59
HMGN1-204ENST00000380749 UMAD1C9J7I0 102 aa11.33□□□□□ -0.6
HMGN1-204ENST00000380749 CRPP02741 224 aa11.33□□□□□ -0.6
HMGN1-204ENST00000380749 RAB4BP61018 213 aa11.33□□□□□ -0.6
HMGN1-204ENST00000380749 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
HMGN1-204ENST00000380749 DNAJC30Q96LL9 226 aa11.33□□□□□ -0.6
HMGN1-204ENST00000380749 ZNF471Q9BX82 626 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-204ENST00000380749 FAT3Q8TDW7 4589 aa11.32□□□□□ -0.6
HMGN1-204ENST00000380749 A0A1B0GV50 99 aa11.32□□□□□ -0.6
HMGN1-204ENST00000380749 SCO2A0A1W2PP80 73 aa11.32□□□□□ -0.6
HMGN1-204ENST00000380749 J3QL48 77 aa11.32□□□□□ -0.6
HMGN1-204ENST00000380749 RPL19P84098 196 aaKnown RBP11.32□□□□□ -0.6
HMGN1-204ENST00000380749 ATRAIDQ6UW56 229 aa11.32□□□□□ -0.6
HMGN1-204ENST00000380749 KCNRGQ8N5I3 272 aa11.32□□□□□ -0.6
HMGN1-204ENST00000380749 C1orf43Q9BWL3 253 aa11.32□□□□□ -0.6
HMGN1-204ENST00000380749 TRBV6-8A0A0A6YYG3 113 aa11.31□□□□□ -0.6
HMGN1-204ENST00000380749 TMEM262E9PQX1 116 aa11.31□□□□□ -0.6
HMGN1-204ENST00000380749 SMLR1H3BR10 107 aa11.31□□□□□ -0.6
HMGN1-204ENST00000380749 PKIAP61925 76 aa11.31□□□□□ -0.6
HMGN1-204ENST00000380749 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
HMGN1-204ENST00000380749 C14orf177Q52M58 125 aa11.31□□□□□ -0.6
HMGN1-204ENST00000380749 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
HMGN1-204ENST00000380749 LRP1Q07954 4544 aaKnown RBP11.31□□□□□ -0.6
HMGN1-204ENST00000380749 SPANXN1Q5VSR9 72 aa11.3□□□□□ -0.6
HMGN1-204ENST00000380749 SCXQ7RTU7 201 aa11.3□□□□□ -0.6
HMGN1-204ENST00000380749 BAGE2Q86Y30 109 aa11.3□□□□□ -0.6
HMGN1-204ENST00000380749 NEXN-AS1Q8NBZ9 246 aa11.3□□□□□ -0.6
HMGN1-204ENST00000380749 KANTRA0A1W2PQU2 76 aa11.29□□□□□ -0.6
HMGN1-204ENST00000380749 SNAI2O43623 268 aa11.29□□□□□ -0.6
HMGN1-204ENST00000380749 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
HMGN1-204ENST00000380749 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
HMGN1-204ENST00000380749 F5H697 171 aa11.28□□□□□ -0.6
HMGN1-204ENST00000380749 MPV17L2Q567V2 206 aa11.28□□□□□ -0.6
HMGN1-204ENST00000380749 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
HMGN1-204ENST00000380749 DEFB104AQ8WTQ1 72 aa11.28□□□□□ -0.6
HMGN1-204ENST00000380749 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
HMGN1-204ENST00000380749 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms