RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 GAGE12IP0CL82 117 aa13.58□□□□□ -0.24
UBL3-201ENST00000380680 ZFAND3Q9H8U3 227 aa13.58□□□□□ -0.24
UBL3-201ENST00000380680 ACANP16112 2415 aa13.58□□□□□ -0.24
UBL3-201ENST00000380680 TRBV7-9A0A0J9YWB2 115 aa13.57□□□□□ -0.24
UBL3-201ENST00000380680 LOXL1Q08397 574 aaPredicted RBP13.57□□□□□ -0.24
UBL3-201ENST00000380680 MORN3Q6PF18 240 aaPredicted RBP13.57□□□□□ -0.24
UBL3-201ENST00000380680 ZNF625Q96I27 306 aaPredicted RBP13.57□□□□□ -0.24
UBL3-201ENST00000380680 DOPEY1Q5JWR5 2465 aa13.57□□□□□ -0.24
UBL3-201ENST00000380680 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
UBL3-201ENST00000380680 SMAD5-AS1Q9Y6J3 95 aa13.56□□□□□ -0.24
UBL3-201ENST00000380680 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
UBL3-201ENST00000380680 Q8N1Y9 231 aa13.56□□□□□ -0.24
UBL3-201ENST00000380680 M0R2P5 195 aa13.55□□□□□ -0.24
UBL3-201ENST00000380680 CFAP161Q6P656 301 aa13.55□□□□□ -0.24
UBL3-201ENST00000380680 IGLV2-11P01706 119 aa13.55□□□□□ -0.24
UBL3-201ENST00000380680 RNASE13Q5GAN3 156 aaKnown RBP13.55□□□□□ -0.24
UBL3-201ENST00000380680 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
UBL3-201ENST00000380680 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
UBL3-201ENST00000380680 PCSK5Q92824 1860 aa13.54□□□□□ -0.24
UBL3-201ENST00000380680 IGHG4P01861 327 aa13.54□□□□□ -0.24
UBL3-201ENST00000380680 MALP21145 153 aa13.54□□□□□ -0.24
UBL3-201ENST00000380680 LINC00158P58513 81 aa13.54□□□□□ -0.24
UBL3-201ENST00000380680 TTTY13Q9BZ97 58 aa13.54□□□□□ -0.24
UBL3-201ENST00000380680 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.54□□□□□ -0.24
UBL3-201ENST00000380680 PRIMA1Q86XR5 153 aa13.54□□□□□ -0.24
UBL3-201ENST00000380680 RASL10AQ92737 203 aa13.54□□□□□ -0.24
UBL3-201ENST00000380680 SPAG8Q99932 426 aaPredicted RBP13.54□□□□□ -0.24
UBL3-201ENST00000380680 U3KQE9 123 aa13.53□□□□□ -0.24
UBL3-201ENST00000380680 TSSC4Q9Y5U2 329 aaPredicted RBP13.53□□□□□ -0.24
UBL3-201ENST00000380680 IGLC6P0CF74 106 aa13.53□□□□□ -0.24
UBL3-201ENST00000380680 TMEM61Q8N0U2 210 aa13.53□□□□□ -0.24
UBL3-201ENST00000380680 C11orf68Q9H3H3 251 aaKnown RBP13.53□□□□□ -0.24
UBL3-201ENST00000380680 C9orf118A6NHY6 69 aa13.53□□□□□ -0.24
UBL3-201ENST00000380680 K7EMI3 77 aa13.53□□□□□ -0.24
UBL3-201ENST00000380680 SRSF2Q01130 221 aaKnown RBP13.53□□□□□ -0.24
UBL3-201ENST00000380680 VPS13AQ96RL7 3174 aa13.53□□□□□ -0.24
UBL3-201ENST00000380680 JPT2Q9H910 190 aa13.53□□□□□ -0.24
UBL3-201ENST00000380680 C10orf99Q6UWK7 81 aa13.51□□□□□ -0.25
UBL3-201ENST00000380680 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
UBL3-201ENST00000380680 RAI1Q7Z5J4 1906 aaPredicted RBP13.51□□□□□ -0.25
UBL3-201ENST00000380680 A0A0J9YX75 114 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 TRBV25-1A0A075B6N4 114 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 K7ERJ3 54 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 DLX4Q92988 240 aaPredicted RBP13.5□□□□□ -0.25
UBL3-201ENST00000380680 MDFICQ9P1T7 246 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 TRAV8-2A0A0B4J237 113 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 J3QQQ9 107 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
UBL3-201ENST00000380680 SIVA1O15304 175 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 ADAMTSL5Q6ZMM2 481 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 SCRT2Q9NQ03 307 aa13.5□□□□□ -0.25
UBL3-201ENST00000380680 MGAQ8IWI9 3026 aa13.49□□□□□ -0.25
UBL3-201ENST00000380680 ANKRD17O75179 2603 aaKnown RBP13.49□□□□□ -0.25
UBL3-201ENST00000380680 ZFP2Q6ZN57 461 aa13.49□□□□□ -0.25
UBL3-201ENST00000380680 VWC2LB2RUY7 222 aa13.49□□□□□ -0.25
UBL3-201ENST00000380680 MTURNQ8N3F0 131 aa13.49□□□□□ -0.25
UBL3-201ENST00000380680 C20orf173Q96LM9 149 aa13.49□□□□□ -0.25
UBL3-201ENST00000380680 NOP10Q9NPE3 64 aaKnown RBP13.49□□□□□ -0.25
UBL3-201ENST00000380680 RPL39P62891 51 aaKnown RBP13.48□□□□□ -0.25
UBL3-201ENST00000380680 C6orf226Q5I0X4 101 aa13.48□□□□□ -0.25
UBL3-201ENST00000380680 Q6ZS46 218 aa13.48□□□□□ -0.25
UBL3-201ENST00000380680 DEFB125Q8N687 156 aa13.48□□□□□ -0.25
UBL3-201ENST00000380680 CEND1Q8N111 149 aa13.48□□□□□ -0.25
UBL3-201ENST00000380680 RHOHQ15669 191 aa13.47□□□□□ -0.25
UBL3-201ENST00000380680 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
UBL3-201ENST00000380680 GATD1Q8NB37 220 aa13.47□□□□□ -0.25
UBL3-201ENST00000380680 LAMA1P25391 3075 aa13.46□□□□□ -0.25
UBL3-201ENST00000380680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.46□□□□□ -0.25
UBL3-201ENST00000380680 IGKV2-29A2NJV5 120 aaPredicted RBP13.46□□□□□ -0.25
UBL3-201ENST00000380680 IGHV4-31P0DP07 118 aa13.46□□□□□ -0.25
UBL3-201ENST00000380680 CST9LQ9H4G1 147 aa13.46□□□□□ -0.25
UBL3-201ENST00000380680 CKS1BP61024 79 aa13.46□□□□□ -0.26
UBL3-201ENST00000380680 PAX4O43316 350 aa13.46□□□□□ -0.26
UBL3-201ENST00000380680 TMEM243Q9BU79 118 aa13.46□□□□□ -0.26
UBL3-201ENST00000380680 ODF1Q14990 250 aa13.45□□□□□ -0.26
UBL3-201ENST00000380680 WFDC11Q8NEX6 87 aa13.45□□□□□ -0.26
UBL3-201ENST00000380680 GAGE6Q13070 117 aa13.45□□□□□ -0.26
UBL3-201ENST00000380680 MED14OSP0DP75 135 aa13.45□□□□□ -0.26
UBL3-201ENST00000380680 RBMY1BA6NDE4 496 aaKnown RBP13.44□□□□□ -0.26
UBL3-201ENST00000380680 RBMY1EA6NEQ0 496 aaKnown RBP13.44□□□□□ -0.26
UBL3-201ENST00000380680 RBMY1DP0C7P1 496 aaKnown RBP13.44□□□□□ -0.26
UBL3-201ENST00000380680 RBMY1A1P0DJD3 496 aaKnown RBP13.44□□□□□ -0.26
UBL3-201ENST00000380680 RBMY1CP0DJD4 496 aa13.44□□□□□ -0.26
UBL3-201ENST00000380680 TMEM86BQ8N661 226 aa13.44□□□□□ -0.26
UBL3-201ENST00000380680 CENPEQ02224 2701 aa13.44□□□□□ -0.26
UBL3-201ENST00000380680 AVPP01185 164 aa13.44□□□□□ -0.26
UBL3-201ENST00000380680 ZFAND2AQ8N6M9 145 aa13.44□□□□□ -0.26
UBL3-201ENST00000380680 A0A0J9YXV3 536 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 A0A1W2PPM0 123 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 Q6YL49 198 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 CRPP02741 224 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 CITED2Q99967 270 aaPredicted RBP13.43□□□□□ -0.26
UBL3-201ENST00000380680 TAL2Q16559 108 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 ZNF843Q8N446 348 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 ETDBQ3ZM63 59 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 AMTNQ6UX39 209 aa13.43□□□□□ -0.26
UBL3-201ENST00000380680 OCIAD2Q56VL3 154 aa13.42□□□□□ -0.26
UBL3-201ENST00000380680 TP73-AS1Q9UF72 201 aa13.42□□□□□ -0.26
UBL3-201ENST00000380680 K7EQG2 157 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms