RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RNF222A6NCQ9 220 aa15.13■□□□□ 0.01
U2AF1-202ENST00000380276 Q86TA4 180 aa15.13■□□□□ 0.01
U2AF1-202ENST00000380276 A0A1W2PRE2 83 aa15.12■□□□□ 0.01
U2AF1-202ENST00000380276 PEX7O00628 323 aa15.12■□□□□ 0.01
U2AF1-202ENST00000380276 ELOBQ15370 118 aa15.12■□□□□ 0.01
U2AF1-202ENST00000380276 SERTAD4-AS1Q5TG53 156 aa15.12■□□□□ 0.01
U2AF1-202ENST00000380276 CIRBP-AS1Q8TBR5 109 aa15.12■□□□□ 0.01
U2AF1-202ENST00000380276 TNFSF18Q9UNG2 199 aa15.12■□□□□ 0.01
U2AF1-202ENST00000380276 PHLDA3Q9Y5J5 127 aa15.12■□□□□ 0.01
U2AF1-202ENST00000380276 M0R381 172 aa15.11■□□□□ 0.01
U2AF1-202ENST00000380276 TMSB15BA0A087X1C1 80 aa15.1■□□□□ 0.01
U2AF1-202ENST00000380276 TMEM262E9PQX1 116 aa15.1■□□□□ 0.01
U2AF1-202ENST00000380276 TPT1P13693 172 aaKnown RBP15.1■□□□□ 0.01
U2AF1-202ENST00000380276 AQP10Q96PS8 301 aa15.1■□□□□ 0.01
U2AF1-202ENST00000380276 ALG5Q9Y673 324 aa15.1■□□□□ 0.01
U2AF1-202ENST00000380276 KRBOX1C9JBD0 128 aa15.09■□□□□ 0.01
U2AF1-202ENST00000380276 SH2D1AO60880 128 aa15.09■□□□□ 0.01
U2AF1-202ENST00000380276 IGLV2-8P01709 118 aa15.09■□□□□ 0.01
U2AF1-202ENST00000380276 RPL36AP83881 106 aaKnown RBP15.09■□□□□ 0.01
U2AF1-202ENST00000380276 RPL36ALQ969Q0 106 aaKnown RBP15.09■□□□□ 0.01
U2AF1-202ENST00000380276 ZC2HC1AQ96GY0 325 aa15.09■□□□□ 0.01
U2AF1-202ENST00000380276 SFRP2Q96HF1 295 aa15.08■□□□□ 0
U2AF1-202ENST00000380276 CHCHD7Q9BUK0 85 aa15.08■□□□□ 0
U2AF1-202ENST00000380276 C1orf43Q9BWL3 253 aa15.08■□□□□ 0
U2AF1-202ENST00000380276 CRPP02741 224 aa15.07■□□□□ 0
U2AF1-202ENST00000380276 CRIP1P50238 77 aa15.07■□□□□ 0
U2AF1-202ENST00000380276 Q0VG73 95 aa15.07■□□□□ 0
U2AF1-202ENST00000380276 LINC01559Q495D7 138 aa15.07■□□□□ 0
U2AF1-202ENST00000380276 C14orf177Q52M58 125 aa15.07■□□□□ 0
U2AF1-202ENST00000380276 UBE2G1P62253 170 aa15.06■□□□□ 0
U2AF1-202ENST00000380276 ZNF726P1Q15940 193 aa15.06■□□□□ 0
U2AF1-202ENST00000380276 FAM162BQ5T6X4 162 aa15.06■□□□□ 0
U2AF1-202ENST00000380276 BORCS7-ASMTA0A0B4J1R7 106 aa15.05■□□□□ -0
U2AF1-202ENST00000380276 CTXND1A0A1B0GTU2 59 aa15.05■□□□□ -0
U2AF1-202ENST00000380276 OXTP01178 125 aa15.05■□□□□ -0
U2AF1-202ENST00000380276 KRTAP10-4P60372 401 aaPredicted RBP15.05■□□□□ -0
U2AF1-202ENST00000380276 DNLZQ5SXM8 178 aa15.05■□□□□ -0
U2AF1-202ENST00000380276 RPL7L1Q6DKI1 246 aaKnown RBP15.05■□□□□ -0
U2AF1-202ENST00000380276 ZFP82Q8N141 532 aa15.05■□□□□ -0
U2AF1-202ENST00000380276 C15orf54Q8N8G6 183 aa15.05■□□□□ -0
U2AF1-202ENST00000380276 HIST1H2BAQ96A08 127 aa15.05■□□□□ -0
U2AF1-202ENST00000380276 TRBV10-1A0A0K0K1A3 114 aa15.04■□□□□ -0
U2AF1-202ENST00000380276 FAM74A7A6NL05 159 aa15.04■□□□□ -0
U2AF1-202ENST00000380276 INO80EQ8NBZ0 244 aaPredicted RBP15.04■□□□□ -0
U2AF1-202ENST00000380276 MED28Q9H204 178 aa15.04■□□□□ -0
U2AF1-202ENST00000380276 ZFP30Q9Y2G7 519 aa15.04■□□□□ -0
U2AF1-202ENST00000380276 LRP1Q07954 4544 aaKnown RBP15.04■□□□□ -0
U2AF1-202ENST00000380276 TRBV7-3A0A075B6L6 115 aa15.03■□□□□ -0
U2AF1-202ENST00000380276 HLA-DQA1P01909 254 aa15.03■□□□□ -0
U2AF1-202ENST00000380276 UBE2D3P61077 147 aa15.03■□□□□ -0
U2AF1-202ENST00000380276 RPL37AP61513 92 aaKnown RBP15.03■□□□□ -0
U2AF1-202ENST00000380276 UBE2D2P62837 147 aa15.03■□□□□ -0
U2AF1-202ENST00000380276 NKX6-2Q9C056 277 aaPredicted RBP15.03■□□□□ -0
U2AF1-202ENST00000380276 ANGP03950 147 aaKnown RBP15.02■□□□□ -0
U2AF1-202ENST00000380276 ZNF56Q15929 161 aa15.02■□□□□ -0
U2AF1-202ENST00000380276 AKR1C8PQ5T2L2 129 aa15.02■□□□□ -0
U2AF1-202ENST00000380276 ATRAIDQ6UW56 229 aa15.02■□□□□ -0
U2AF1-202ENST00000380276 FMC1Q96HJ9 113 aa15.02■□□□□ -0
U2AF1-202ENST00000380276 PLA2G2DQ9UNK4 145 aa15.02■□□□□ -0
U2AF1-202ENST00000380276 Q5BKY6 102 aa15.01□□□□□ -0.01
U2AF1-202ENST00000380276 HMCN2Q8NDA2 5059 aa15□□□□□ -0.01
U2AF1-202ENST00000380276 FXYD6-FXYD2A0A087WZ82 144 aa15□□□□□ -0.01
U2AF1-202ENST00000380276 ENHOQ6UWT2 76 aa15□□□□□ -0.01
U2AF1-202ENST00000380276 FAT3Q8TDW7 4589 aa14.99□□□□□ -0.01
U2AF1-202ENST00000380276 TRBV6-8A0A0A6YYG3 113 aa14.99□□□□□ -0.01
U2AF1-202ENST00000380276 USP17L23D6RBM5 183 aa14.99□□□□□ -0.01
U2AF1-202ENST00000380276 MPV17L2Q567V2 206 aa14.99□□□□□ -0.01
U2AF1-202ENST00000380276 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.99□□□□□ -0.01
U2AF1-202ENST00000380276 CHCHD5Q9BSY4 110 aa14.99□□□□□ -0.01
U2AF1-202ENST00000380276 PTTG1O95997 202 aa14.98□□□□□ -0.01
U2AF1-202ENST00000380276 AKR1C3P42330 323 aa14.98□□□□□ -0.01
U2AF1-202ENST00000380276 ZNF674Q2M3X9 581 aa14.98□□□□□ -0.01
U2AF1-202ENST00000380276 CST9LP1Q5W188 147 aa14.98□□□□□ -0.01
U2AF1-202ENST00000380276 MAP1LC3B2A6NCE7 125 aa14.97□□□□□ -0.01
U2AF1-202ENST00000380276 COX8CQ7Z4L0 72 aa14.97□□□□□ -0.01
U2AF1-202ENST00000380276 STOML3Q8TAV4 291 aa14.97□□□□□ -0.01
U2AF1-202ENST00000380276 MAP1LC3BQ9GZQ8 125 aa14.97□□□□□ -0.01
U2AF1-202ENST00000380276 A6NHS1 94 aa14.96□□□□□ -0.01
U2AF1-202ENST00000380276 RAB4BP61018 213 aa14.96□□□□□ -0.01
U2AF1-202ENST00000380276 CLPSL2Q6UWE3 100 aa14.96□□□□□ -0.01
U2AF1-202ENST00000380276 NEXN-AS1Q8NBZ9 246 aa14.96□□□□□ -0.01
U2AF1-202ENST00000380276 OR10G8Q8NGN5 311 aa14.95□□□□□ -0.02
U2AF1-202ENST00000380276 F5H697 171 aa14.94□□□□□ -0.02
U2AF1-202ENST00000380276 LTAP01374 205 aa14.94□□□□□ -0.02
U2AF1-202ENST00000380276 GIPP09681 153 aaPredicted RBP14.94□□□□□ -0.02
U2AF1-202ENST00000380276 SSTP61278 116 aa14.94□□□□□ -0.02
U2AF1-202ENST00000380276 RPL19P84098 196 aaKnown RBP14.94□□□□□ -0.02
U2AF1-202ENST00000380276 OR10AG1Q8NH19 301 aa14.94□□□□□ -0.02
U2AF1-202ENST00000380276 MUC21A0A0G2JKD1 596 aa14.93□□□□□ -0.02
U2AF1-202ENST00000380276 MUC21A0A140T8X8 626 aa14.93□□□□□ -0.02
U2AF1-202ENST00000380276 PKIAP61925 76 aa14.93□□□□□ -0.02
U2AF1-202ENST00000380276 C4orf48Q5BLP8 95 aa14.93□□□□□ -0.02
U2AF1-202ENST00000380276 ZNF471Q9BX82 626 aaPredicted RBP14.93□□□□□ -0.02
U2AF1-202ENST00000380276 TRBV6-1A0A0K0K1D8 114 aa14.92□□□□□ -0.02
U2AF1-202ENST00000380276 PRSS1P07477 247 aa14.92□□□□□ -0.02
U2AF1-202ENST00000380276 MIAQ16674 131 aa14.92□□□□□ -0.02
U2AF1-202ENST00000380276 SPANXN1Q5VSR9 72 aa14.92□□□□□ -0.02
U2AF1-202ENST00000380276 HNRNPA3P51991 378 aaKnown RBP14.91□□□□□ -0.02
U2AF1-202ENST00000380276 GAGE6Q13070 117 aa14.9□□□□□ -0.02
U2AF1-202ENST00000380276 DAZAP1Q96EP5 407 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms