RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 MGPP08493 103 aa17.69■□□□□ 0.42
ECHDC3-201ENST00000379215 BAGE3Q86Y29 109 aa17.69■□□□□ 0.42
ECHDC3-201ENST00000379215 C18orf32Q8TCD1 76 aa17.69■□□□□ 0.42
ECHDC3-201ENST00000379215 OVOL2Q9BRP0 275 aa17.69■□□□□ 0.42
ECHDC3-201ENST00000379215 MUC4Q99102 2169 aa17.69■□□□□ 0.42
ECHDC3-201ENST00000379215 PKD1L1Q8TDX9 2849 aa17.68■□□□□ 0.42
ECHDC3-201ENST00000379215 RHODO00212 210 aa17.68■□□□□ 0.42
ECHDC3-201ENST00000379215 PPP1R17O96001 155 aa17.68■□□□□ 0.42
ECHDC3-201ENST00000379215 TP53TG1Q9Y2A0 90 aa17.68■□□□□ 0.42
ECHDC3-201ENST00000379215 PLAC8L1A1L4L8 177 aa17.67■□□□□ 0.42
ECHDC3-201ENST00000379215 C5orf52A6NGY3 159 aa17.67■□□□□ 0.42
ECHDC3-201ENST00000379215 MRPL16Q9NX20 251 aaKnown RBP17.67■□□□□ 0.42
ECHDC3-201ENST00000379215 TRGV1A0A0A0MS02 117 aa17.66■□□□□ 0.42
ECHDC3-201ENST00000379215 CRYGDP07320 174 aa17.66■□□□□ 0.42
ECHDC3-201ENST00000379215 MIFP14174 115 aa17.66■□□□□ 0.42
ECHDC3-201ENST00000379215 OR11H2Q8NH07 326 aa17.66■□□□□ 0.42
ECHDC3-201ENST00000379215 A0A087WWL8 130 aa17.65■□□□□ 0.42
ECHDC3-201ENST00000379215 SNRPEP62304 92 aaKnown RBP17.65■□□□□ 0.42
ECHDC3-201ENST00000379215 FAM74A4Q5TZK3 123 aa17.65■□□□□ 0.42
ECHDC3-201ENST00000379215 JPT2Q9H910 190 aa17.65■□□□□ 0.42
ECHDC3-201ENST00000379215 NOP10Q9NPE3 64 aaKnown RBP17.65■□□□□ 0.42
ECHDC3-201ENST00000379215 LINC00315P59091 139 aa17.65■□□□□ 0.42
ECHDC3-201ENST00000379215 RS1O15537 224 aa17.63■□□□□ 0.41
ECHDC3-201ENST00000379215 NCR2O95944 276 aa17.63■□□□□ 0.41
ECHDC3-201ENST00000379215 ZNF56Q15929 161 aa17.63■□□□□ 0.41
ECHDC3-201ENST00000379215 CFAP126Q5VTH2 177 aa17.63■□□□□ 0.41
ECHDC3-201ENST00000379215 ZFP2Q6ZN57 461 aa17.63■□□□□ 0.41
ECHDC3-201ENST00000379215 F5H697 171 aa17.62■□□□□ 0.41
ECHDC3-201ENST00000379215 SMKR1H3BMG3 65 aa17.62■□□□□ 0.41
ECHDC3-201ENST00000379215 CIDEAO60543 219 aa17.62■□□□□ 0.41
ECHDC3-201ENST00000379215 HOXA5P20719 270 aa17.62■□□□□ 0.41
ECHDC3-201ENST00000379215 SAMD10Q9BYL1 202 aa17.62■□□□□ 0.41
ECHDC3-201ENST00000379215 MAP1LC3AQ9H492 121 aa17.61■□□□□ 0.41
ECHDC3-201ENST00000379215 H7C1H1 209 aa17.61■□□□□ 0.41
ECHDC3-201ENST00000379215 TNFRSF6BO95407 300 aa17.61■□□□□ 0.41
ECHDC3-201ENST00000379215 Q6ZTI0 123 aa17.61■□□□□ 0.41
ECHDC3-201ENST00000379215 DNAH3Q8TD57 4116 aa17.6■□□□□ 0.41
ECHDC3-201ENST00000379215 TRAV26-2A0A0B4J265 109 aa17.6■□□□□ 0.41
ECHDC3-201ENST00000379215 TRAV4A0A0B4J268 109 aa17.6■□□□□ 0.41
ECHDC3-201ENST00000379215 NPYP01303 97 aa17.6■□□□□ 0.41
ECHDC3-201ENST00000379215 IQCJQ1A5X6 159 aa17.6■□□□□ 0.41
ECHDC3-201ENST00000379215 SUMO4Q6EEV6 95 aa17.6■□□□□ 0.41
ECHDC3-201ENST00000379215 OR4C5Q8NGB2 326 aa17.6■□□□□ 0.41
ECHDC3-201ENST00000379215 EDA2RQ9HAV5 297 aa17.6■□□□□ 0.41
ECHDC3-201ENST00000379215 LYRM9A8MSI8 78 aa17.59■□□□□ 0.41
ECHDC3-201ENST00000379215 ESDP10768 282 aa17.59■□□□□ 0.41
ECHDC3-201ENST00000379215 UFSP1Q6NVU6 142 aa17.59■□□□□ 0.41
ECHDC3-201ENST00000379215 NRACQ8N912 160 aa17.59■□□□□ 0.41
ECHDC3-201ENST00000379215 SERF1AO75920 110 aa17.58■□□□□ 0.41
ECHDC3-201ENST00000379215 CHCHD1Q96BP2 118 aaKnown RBP17.58■□□□□ 0.41
ECHDC3-201ENST00000379215 C20orf78Q9BR46 151 aa17.58■□□□□ 0.41
ECHDC3-201ENST00000379215 TRGV2A0A075B6R0 118 aa17.58■□□□□ 0.4
ECHDC3-201ENST00000379215 IGHV4-28A0A0C4DH34 117 aa17.58■□□□□ 0.4
ECHDC3-201ENST00000379215 S100A2P29034 98 aa17.58■□□□□ 0.4
ECHDC3-201ENST00000379215 EMP1P54849 157 aa17.58■□□□□ 0.4
ECHDC3-201ENST00000379215 PRSS3P2Q8NHM4 247 aa17.58■□□□□ 0.4
ECHDC3-201ENST00000379215 PRSS47A8MTI9 375 aa17.57■□□□□ 0.4
ECHDC3-201ENST00000379215 K7EIL1 84 aa17.57■□□□□ 0.4
ECHDC3-201ENST00000379215 Q8NAQ8 132 aa17.57■□□□□ 0.4
ECHDC3-201ENST00000379215 C18orf15Q96N68 181 aa17.57■□□□□ 0.4
ECHDC3-201ENST00000379215 HIST3H2BBQ8N257 126 aa17.56■□□□□ 0.4
ECHDC3-201ENST00000379215 LINC00612Q8N6U2 182 aa17.56■□□□□ 0.4
ECHDC3-201ENST00000379215 NXT2Q9NPJ8 142 aaKnown RBP17.56■□□□□ 0.4
ECHDC3-201ENST00000379215 GAGE12BA1L429 117 aa17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 GAGE7O76087 117 aa17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 LINC00614P0C842 121 aa17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 GAGE12FP0CL80 117 aa17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 GAGE12GP0CL81 117 aa17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 GAGE12IP0CL82 117 aa17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 GATA1P15976 413 aaPredicted RBP17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 RNASEKQ6P5S7 137 aaKnown RBP17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 FA2HQ7L5A8 372 aa17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 NIT1Q86X76 327 aa17.55■□□□□ 0.4
ECHDC3-201ENST00000379215 TEX48A0A1B0GUV7 120 aa17.54■□□□□ 0.4
ECHDC3-201ENST00000379215 M0QY20 66 aa17.54■□□□□ 0.4
ECHDC3-201ENST00000379215 GAS8-AS1O95177 125 aa17.54■□□□□ 0.4
ECHDC3-201ENST00000379215 PMCHP20382 165 aa17.54■□□□□ 0.4
ECHDC3-201ENST00000379215 HSBP1O75506 76 aa17.54■□□□□ 0.4
ECHDC3-201ENST00000379215 SUMO2P61956 95 aaKnown RBP17.54■□□□□ 0.4
ECHDC3-201ENST00000379215 IGHV3-53P01767 116 aa17.53■□□□□ 0.4
ECHDC3-201ENST00000379215 LINC00310P59036 64 aa17.53■□□□□ 0.4
ECHDC3-201ENST00000379215 AP5S1Q9NUS5 200 aa17.53■□□□□ 0.4
ECHDC3-201ENST00000379215 IGHV3-73A0A0B4J1V6 119 aa17.52■□□□□ 0.4
ECHDC3-201ENST00000379215 TRBV6-5A0A0K0K1A5 114 aa17.52■□□□□ 0.4
ECHDC3-201ENST00000379215 LOC389332A0A1B0GUA5 103 aa17.52■□□□□ 0.4
ECHDC3-201ENST00000379215 PRB2P02812 416 aaPredicted RBP17.52■□□□□ 0.4
ECHDC3-201ENST00000379215 RPL32P62910 135 aaKnown RBP17.52■□□□□ 0.4
ECHDC3-201ENST00000379215 TMEM18Q96B42 140 aa17.52■□□□□ 0.4
ECHDC3-201ENST00000379215 ST20Q9HBF5 79 aa17.52■□□□□ 0.4
ECHDC3-201ENST00000379215 MGAM2Q2M2H8 2515 aa17.52■□□□□ 0.39
ECHDC3-201ENST00000379215 LOC105371267A0A1B0GV96 52 aa17.51■□□□□ 0.39
ECHDC3-201ENST00000379215 IFI27P40305 119 aaPredicted RBP17.51■□□□□ 0.39
ECHDC3-201ENST00000379215 PDZD11Q5EBL8 140 aa17.51■□□□□ 0.39
ECHDC3-201ENST00000379215 DEFB121Q5J5C9 76 aa17.51■□□□□ 0.39
ECHDC3-201ENST00000379215 RPL39LQ96EH5 51 aaKnown RBP17.51■□□□□ 0.39
ECHDC3-201ENST00000379215 PACRGQ96M98 296 aaPredicted RBP17.51■□□□□ 0.39
ECHDC3-201ENST00000379215 NIT2Q9NQR4 276 aa17.51■□□□□ 0.39
ECHDC3-201ENST00000379215 DKK2Q9UBU2 259 aa17.51■□□□□ 0.39
ECHDC3-201ENST00000379215 FAM222AQ5U5X8 452 aa17.5■□□□□ 0.39
ECHDC3-201ENST00000379215 Q8N8P6 123 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms