RNA–Protein interactions for RNA: ENST00000377307.6

ARHGAP39-202, Transcript of Rho GTPase activating protein 39, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGAP39, Length 4,673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-202ENST00000377307 Q6ZUT4 128 aa12.53□□□□□ -0.4
ARHGAP39-202ENST00000377307 TRAV13-2A0A0B4J235 113 aa12.53□□□□□ -0.4
ARHGAP39-202ENST00000377307 PF4P02776 101 aa12.53□□□□□ -0.4
ARHGAP39-202ENST00000377307 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
ARHGAP39-202ENST00000377307 JPT2Q9H910 190 aa12.53□□□□□ -0.4
ARHGAP39-202ENST00000377307 ICOSQ9Y6W8 199 aa12.53□□□□□ -0.4
ARHGAP39-202ENST00000377307 PTPRSQ13332 1948 aa12.53□□□□□ -0.4
ARHGAP39-202ENST00000377307 TRBV10-2A0A0K0K1G8 114 aa12.52□□□□□ -0.41
ARHGAP39-202ENST00000377307 GATA3P23771 443 aa12.52□□□□□ -0.41
ARHGAP39-202ENST00000377307 C11orf68Q9H3H3 251 aaKnown RBP12.52□□□□□ -0.41
ARHGAP39-202ENST00000377307 TECTAO75443 2155 aa12.52□□□□□ -0.41
ARHGAP39-202ENST00000377307 MAPKAPK5-AS1Q8N8E1 139 aa12.52□□□□□ -0.41
ARHGAP39-202ENST00000377307 RNF185Q96GF1 192 aa12.52□□□□□ -0.41
ARHGAP39-202ENST00000377307 H3BT86 120 aa12.51□□□□□ -0.41
ARHGAP39-202ENST00000377307 TCL1BO95988 128 aa12.51□□□□□ -0.41
ARHGAP39-202ENST00000377307 ZFHX2Q9C0A1 2572 aaPredicted RBP12.51□□□□□ -0.41
ARHGAP39-202ENST00000377307 TANC2Q9HCD6 1990 aa12.51□□□□□ -0.41
ARHGAP39-202ENST00000377307 GRNP28799 593 aaKnown RBP12.51□□□□□ -0.41
ARHGAP39-202ENST00000377307 XCL2Q9UBD3 114 aa12.51□□□□□ -0.41
ARHGAP39-202ENST00000377307 UFSP1Q6NVU6 142 aa12.5□□□□□ -0.41
ARHGAP39-202ENST00000377307 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
ARHGAP39-202ENST00000377307 LAMTOR3Q9UHA4 124 aa12.5□□□□□ -0.41
ARHGAP39-202ENST00000377307 SMIM20Q8N5G0 67 aa12.5□□□□□ -0.41
ARHGAP39-202ENST00000377307 Q9H8V8 135 aa12.5□□□□□ -0.41
ARHGAP39-202ENST00000377307 COL5A1P20908 1838 aaPredicted RBP12.5□□□□□ -0.41
ARHGAP39-202ENST00000377307 SPANXCQ9NY87 97 aa12.49□□□□□ -0.41
ARHGAP39-202ENST00000377307 TMEM243Q9BU79 118 aa12.49□□□□□ -0.41
ARHGAP39-202ENST00000377307 BAALC-AS2P0C853 105 aa12.49□□□□□ -0.41
ARHGAP39-202ENST00000377307 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
ARHGAP39-202ENST00000377307 MT-ATP8P03928 68 aa12.49□□□□□ -0.41
ARHGAP39-202ENST00000377307 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
ARHGAP39-202ENST00000377307 C5orf56Q8N8D9 126 aa12.48□□□□□ -0.41
ARHGAP39-202ENST00000377307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.47□□□□□ -0.41
ARHGAP39-202ENST00000377307 IGKV2-29A2NJV5 120 aaPredicted RBP12.47□□□□□ -0.41
ARHGAP39-202ENST00000377307 AJUBAQ96IF1 538 aa12.47□□□□□ -0.41
ARHGAP39-202ENST00000377307 LINC01356Q8N9X3 169 aa12.47□□□□□ -0.41
ARHGAP39-202ENST00000377307 SS18Q15532 418 aa12.47□□□□□ -0.41
ARHGAP39-202ENST00000377307 PFN2P35080 140 aa12.46□□□□□ -0.41
ARHGAP39-202ENST00000377307 C22orf34Q6ZV56 151 aa12.46□□□□□ -0.41
ARHGAP39-202ENST00000377307 RNF183Q96D59 192 aa12.46□□□□□ -0.41
ARHGAP39-202ENST00000377307 C20orf203Q8NBC4 194 aa12.46□□□□□ -0.41
ARHGAP39-202ENST00000377307 ELANEP08246 267 aa12.46□□□□□ -0.42
ARHGAP39-202ENST00000377307 GNLYP22749 145 aa12.46□□□□□ -0.42
ARHGAP39-202ENST00000377307 SLC25A29Q8N8R3 303 aa12.46□□□□□ -0.42
ARHGAP39-202ENST00000377307 TRACP01848 142 aa12.45□□□□□ -0.42
ARHGAP39-202ENST00000377307 HERV-K104P63124 156 aa12.45□□□□□ -0.42
ARHGAP39-202ENST00000377307 A0A0B4J2C4 111 aa12.45□□□□□ -0.42
ARHGAP39-202ENST00000377307 ODF3BA8MYP8 253 aa12.45□□□□□ -0.42
ARHGAP39-202ENST00000377307 LINC01619G3V211 115 aa12.45□□□□□ -0.42
ARHGAP39-202ENST00000377307 DEFB1P60022 68 aa12.45□□□□□ -0.42
ARHGAP39-202ENST00000377307 SPATA25Q9BR10 227 aa12.45□□□□□ -0.42
ARHGAP39-202ENST00000377307 Q8N1Y9 231 aa12.44□□□□□ -0.42
ARHGAP39-202ENST00000377307 CCDC140Q96MF4 163 aa12.44□□□□□ -0.42
ARHGAP39-202ENST00000377307 UBL5Q9BZL1 73 aa12.44□□□□□ -0.42
ARHGAP39-202ENST00000377307 CEP192Q8TEP8 1941 aa12.44□□□□□ -0.42
ARHGAP39-202ENST00000377307 A0A0J9YY99 117 aa12.44□□□□□ -0.42
ARHGAP39-202ENST00000377307 K7EMT4 169 aa12.43□□□□□ -0.42
ARHGAP39-202ENST00000377307 HTN3P15516 51 aa12.43□□□□□ -0.42
ARHGAP39-202ENST00000377307 LY6LH3BQJ8 138 aa12.43□□□□□ -0.42
ARHGAP39-202ENST00000377307 FSTL3O95633 263 aa12.43□□□□□ -0.42
ARHGAP39-202ENST00000377307 RPL35AP18077 110 aaKnown RBP12.43□□□□□ -0.42
ARHGAP39-202ENST00000377307 SMAD5-AS1Q9Y6J3 95 aa12.43□□□□□ -0.42
ARHGAP39-202ENST00000377307 FAM236AA0A1B0GUQ0 79 aa12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 FAM236BA0A1B0GV22 79 aa12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 CENPFP49454 3210 aa12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 IGHV3-30-3P0DP02 117 aa12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 TMEM126AQ9H061 195 aa12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 IGHV1-58A0A0C4DH39 117 aa12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 ZFP36P26651 326 aaKnown RBP12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 Q71RC1 249 aaPredicted RBP12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 SIRPDQ9H106 197 aa12.42□□□□□ -0.42
ARHGAP39-202ENST00000377307 UNQ9165/PRO28630Q6UXU0 137 aa12.41□□□□□ -0.42
ARHGAP39-202ENST00000377307 CNFNQ9BYD5 112 aa12.41□□□□□ -0.42
ARHGAP39-202ENST00000377307 NRACQ8N912 160 aa12.41□□□□□ -0.42
ARHGAP39-202ENST00000377307 EXPH5Q8NEV8 1989 aa12.41□□□□□ -0.42
ARHGAP39-202ENST00000377307 PTPRQQ9UMZ3 2332 aa12.41□□□□□ -0.42
ARHGAP39-202ENST00000377307 LGALS9O00182 355 aa12.41□□□□□ -0.42
ARHGAP39-202ENST00000377307 NACAE9PAV3 2078 aa12.4□□□□□ -0.42
ARHGAP39-202ENST00000377307 ZFAND3Q9H8U3 227 aa12.4□□□□□ -0.42
ARHGAP39-202ENST00000377307 BLCAPP62952 87 aa12.4□□□□□ -0.42
ARHGAP39-202ENST00000377307 NDUFV3P56181 108 aaKnown RBP12.4□□□□□ -0.42
ARHGAP39-202ENST00000377307 CFAP126Q5VTH2 177 aa12.4□□□□□ -0.42
ARHGAP39-202ENST00000377307 OPRPNQ99935 248 aaPredicted RBP12.4□□□□□ -0.42
ARHGAP39-202ENST00000377307 HHLA3Q9XRX5 114 aa12.4□□□□□ -0.42
ARHGAP39-202ENST00000377307 U3KQE9 123 aa12.4□□□□□ -0.42
ARHGAP39-202ENST00000377307 CLEC2BQ92478 149 aa12.39□□□□□ -0.43
ARHGAP39-202ENST00000377307 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
ARHGAP39-202ENST00000377307 HOXD3P31249 432 aaPredicted RBP12.39□□□□□ -0.43
ARHGAP39-202ENST00000377307 RPL32P62910 135 aaKnown RBP12.39□□□□□ -0.43
ARHGAP39-202ENST00000377307 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
ARHGAP39-202ENST00000377307 WNK1Q9H4A3 2382 aa12.38□□□□□ -0.43
ARHGAP39-202ENST00000377307 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
ARHGAP39-202ENST00000377307 EBI3Q14213 229 aa12.38□□□□□ -0.43
ARHGAP39-202ENST00000377307 FBXL19-AS1Q494R0 122 aa12.38□□□□□ -0.43
ARHGAP39-202ENST00000377307 RNF152Q8N8N0 203 aa12.38□□□□□ -0.43
ARHGAP39-202ENST00000377307 H0YGX0 51 aa12.38□□□□□ -0.43
ARHGAP39-202ENST00000377307 ACACBO00763 2458 aa12.37□□□□□ -0.43
ARHGAP39-202ENST00000377307 ATOX1O00244 68 aa12.37□□□□□ -0.43
ARHGAP39-202ENST00000377307 DEFB130BP0DP73 79 aa12.37□□□□□ -0.43
ARHGAP39-202ENST00000377307 DEFB130AP0DP74 79 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms