RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 RNF223E7ERA6 249 aa9.73□□□□□ -0.85
USP11-204ENST00000377107 ZNF479Q96JC4 524 aa9.73□□□□□ -0.85
USP11-204ENST00000377107 OPRPNQ99935 248 aaPredicted RBP9.73□□□□□ -0.85
USP11-204ENST00000377107 PRADC1Q9BSG0 188 aa9.73□□□□□ -0.85
USP11-204ENST00000377107 PLNP26678 52 aa9.73□□□□□ -0.85
USP11-204ENST00000377107 CEND1Q8N111 149 aa9.73□□□□□ -0.85
USP11-204ENST00000377107 H7C2G1 150 aa9.72□□□□□ -0.85
USP11-204ENST00000377107 SNRPD3P62318 126 aaKnown RBP9.72□□□□□ -0.85
USP11-204ENST00000377107 PRORYQ9H606 182 aa9.72□□□□□ -0.85
USP11-204ENST00000377107 TEX15Q9BXT5 2789 aa9.72□□□□□ -0.85
USP11-204ENST00000377107 H3BMG7 143 aa9.72□□□□□ -0.85
USP11-204ENST00000377107 SIVA1O15304 175 aa9.72□□□□□ -0.85
USP11-204ENST00000377107 CDKN1BP46527 198 aa9.72□□□□□ -0.85
USP11-204ENST00000377107 SDHAF1A6NFY7 115 aa9.72□□□□□ -0.85
USP11-204ENST00000377107 MUC4Q99102 2169 aa9.71□□□□□ -0.85
USP11-204ENST00000377107 IGHV3OR16-12A0A075B7B8 117 aa9.71□□□□□ -0.86
USP11-204ENST00000377107 BAALCQ8WXS3 180 aa9.71□□□□□ -0.86
USP11-204ENST00000377107 HLA-DRB4P13762 266 aa9.7□□□□□ -0.86
USP11-204ENST00000377107 SUMO4Q6EEV6 95 aa9.7□□□□□ -0.86
USP11-204ENST00000377107 HLA-DRB4X5D2U9 266 aa9.7□□□□□ -0.86
USP11-204ENST00000377107 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
USP11-204ENST00000377107 PSMG3-AS1Q96PY0 264 aa9.7□□□□□ -0.86
USP11-204ENST00000377107 MRPL16Q9NX20 251 aaKnown RBP9.7□□□□□ -0.86
USP11-204ENST00000377107 COTL1Q14019 142 aa9.7□□□□□ -0.86
USP11-204ENST00000377107 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
USP11-204ENST00000377107 LENEPQ9Y5L5 61 aa9.69□□□□□ -0.86
USP11-204ENST00000377107 C12orf74Q32Q52 190 aa9.69□□□□□ -0.86
USP11-204ENST00000377107 Q8N1Y9 231 aa9.69□□□□□ -0.86
USP11-204ENST00000377107 MYMXA0A1B0GTQ4 84 aa9.69□□□□□ -0.86
USP11-204ENST00000377107 SOCS3O14543 225 aa9.69□□□□□ -0.86
USP11-204ENST00000377107 SH2D6Q7Z4S9 175 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 WFDC2Q14508 124 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 ETDBQ3ZM63 59 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 TOMM6Q96B49 74 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 ZMAT4Q9H898 229 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 FN1P02751 2386 aaKnown RBP9.68□□□□□ -0.86
USP11-204ENST00000377107 IGHV4OR15-8A0A075B7B6 117 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 A0A087WW49 117 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 ZNF418Q8TF45 676 aaPredicted RBP9.68□□□□□ -0.86
USP11-204ENST00000377107 C20orf78Q9BR46 151 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
USP11-204ENST00000377107 TEX48A0A1B0GUV7 120 aa9.67□□□□□ -0.86
USP11-204ENST00000377107 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
USP11-204ENST00000377107 C18orf65Q6ZTR6 163 aa9.67□□□□□ -0.86
USP11-204ENST00000377107 NDUFS8O00217 210 aa9.67□□□□□ -0.86
USP11-204ENST00000377107 DEFB131AP59861 70 aa9.67□□□□□ -0.86
USP11-204ENST00000377107 FBN2P35556 2912 aa9.67□□□□□ -0.86
USP11-204ENST00000377107 IGLL5B9A064 214 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 P0DMU3 169 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 FAM231AP0DMU4 169 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 FAM231CP0DMU5 169 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 SLURP1P55000 103 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 C19orf54Q5BKX5 351 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 ZFP2Q6ZN57 461 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 MXRA5Q9NR99 2828 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 VCYO14598 125 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 SCGB1C2P0DMR2 95 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
USP11-204ENST00000377107 HERVK_113P61574 105 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 NEXN-AS1Q8NBZ9 246 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 OR5A1Q8NGJ0 315 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 CHD6Q8TD26 2715 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 IGHV4-4A0A075B6R2 117 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 HOXA3O43365 443 aaPredicted RBP9.66□□□□□ -0.86
USP11-204ENST00000377107 TCTEX1D4Q5JR98 221 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 SYT8Q8NBV8 401 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 NF1P21359 2839 aa9.66□□□□□ -0.86
USP11-204ENST00000377107 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.86
USP11-204ENST00000377107 DCANP1Q8TF63 244 aa9.65□□□□□ -0.86
USP11-204ENST00000377107 LGALS1P09382 135 aaKnown RBP9.65□□□□□ -0.86
USP11-204ENST00000377107 PSMB2P49721 201 aa9.65□□□□□ -0.86
USP11-204ENST00000377107 IGHV3-16A0A0C4DH30 117 aa9.65□□□□□ -0.87
USP11-204ENST00000377107 IGLV1-40P01703 118 aa9.65□□□□□ -0.87
USP11-204ENST00000377107 COX6B1P14854 86 aa9.65□□□□□ -0.87
USP11-204ENST00000377107 PROK1P58294 105 aa9.65□□□□□ -0.87
USP11-204ENST00000377107 LINC01356Q8N9X3 169 aa9.65□□□□□ -0.87
USP11-204ENST00000377107 HIGD1BQ9P298 99 aa9.65□□□□□ -0.87
USP11-204ENST00000377107 A0A1B0GWB2 263 aa9.64□□□□□ -0.87
USP11-204ENST00000377107 PPP1R17O96001 155 aa9.64□□□□□ -0.87
USP11-204ENST00000377107 CEMP1Q6PRD7 247 aaPredicted RBP9.64□□□□□ -0.87
USP11-204ENST00000377107 IGHV1OR15-1A0A075B7D0 117 aa9.64□□□□□ -0.87
USP11-204ENST00000377107 PRSS2P07478 247 aa9.64□□□□□ -0.87
USP11-204ENST00000377107 IGHV3-38A0A0C4DH36 116 aa9.63□□□□□ -0.87
USP11-204ENST00000377107 H3BUA1 57 aa9.63□□□□□ -0.87
USP11-204ENST00000377107 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
USP11-204ENST00000377107 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
USP11-204ENST00000377107 HIVEP2P31629 2446 aa9.63□□□□□ -0.87
USP11-204ENST00000377107 NPC2P61916 151 aa9.63□□□□□ -0.87
USP11-204ENST00000377107 PMVKQ15126 192 aa9.63□□□□□ -0.87
USP11-204ENST00000377107 DYNLRB2Q8TF09 96 aa9.63□□□□□ -0.87
USP11-204ENST00000377107 PHLDA1Q8WV24 401 aaPredicted RBP9.63□□□□□ -0.87
USP11-204ENST00000377107 A0A0J9YX75 114 aa9.62□□□□□ -0.87
USP11-204ENST00000377107 PSMB8P28062 276 aa9.62□□□□□ -0.87
USP11-204ENST00000377107 Q1RN00 199 aa9.62□□□□□ -0.87
USP11-204ENST00000377107 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
USP11-204ENST00000377107 TRAV2A0A0B4J234 112 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms