RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 M0R036 132 aa14.05□□□□□ -0.16
VSX1-201ENST00000376707 ARMS2P0C7Q2 107 aa14.05□□□□□ -0.16
VSX1-201ENST00000376707 AKR1C3P42330 323 aa14.05□□□□□ -0.16
VSX1-201ENST00000376707 DMRTA1Q5VZB9 504 aa14.05□□□□□ -0.16
VSX1-201ENST00000376707 TM2D2Q9BX73 214 aa14.05□□□□□ -0.16
VSX1-201ENST00000376707 SMR3BP02814 79 aaPredicted RBP14.04□□□□□ -0.16
VSX1-201ENST00000376707 EIF5AP63241 154 aaKnown RBP14.04□□□□□ -0.16
VSX1-201ENST00000376707 SYT8Q8NBV8 401 aa14.04□□□□□ -0.16
VSX1-201ENST00000376707 SAMD10Q9BYL1 202 aa14.04□□□□□ -0.16
VSX1-201ENST00000376707 JPT2Q9H910 190 aa14.04□□□□□ -0.16
VSX1-201ENST00000376707 GRIFINA4D1Z8 144 aa14.03□□□□□ -0.16
VSX1-201ENST00000376707 S100A9P06702 114 aaKnown RBP14.03□□□□□ -0.16
VSX1-201ENST00000376707 TMEM70Q9BUB7 260 aa14.03□□□□□ -0.16
VSX1-201ENST00000376707 RHODO00212 210 aa14.02□□□□□ -0.17
VSX1-201ENST00000376707 HAMPP81172 84 aa14.02□□□□□ -0.17
VSX1-201ENST00000376707 Q8N3U1 123 aa14.02□□□□□ -0.17
VSX1-201ENST00000376707 C14orf178Q8N769 122 aaPredicted RBP14.02□□□□□ -0.17
VSX1-201ENST00000376707 A0A087WWC5 75 aa14.01□□□□□ -0.17
VSX1-201ENST00000376707 H2AFB1P0C5Y9 115 aa14.01□□□□□ -0.17
VSX1-201ENST00000376707 TMUB2Q71RG4 321 aa14.01□□□□□ -0.17
VSX1-201ENST00000376707 SFRP2Q96HF1 295 aa14.01□□□□□ -0.17
VSX1-201ENST00000376707 Q9UF83 564 aa14.01□□□□□ -0.17
VSX1-201ENST00000376707 PHLDA3Q9Y5J5 127 aa14.01□□□□□ -0.17
VSX1-201ENST00000376707 TRAV8-3A0A0A6YYJ7 113 aa14□□□□□ -0.17
VSX1-201ENST00000376707 A0A1B0GV50 99 aa14□□□□□ -0.17
VSX1-201ENST00000376707 FAM229AH3BQW9 127 aa14□□□□□ -0.17
VSX1-201ENST00000376707 TPT1P13693 172 aaKnown RBP14□□□□□ -0.17
VSX1-201ENST00000376707 TOR2AQ5JU69 321 aa14□□□□□ -0.17
VSX1-201ENST00000376707 FAM74A4Q5TZK3 123 aa14□□□□□ -0.17
VSX1-201ENST00000376707 MLST8Q9BVC4 326 aa14□□□□□ -0.17
VSX1-201ENST00000376707 TMSB15BA0A087X1C1 80 aa13.99□□□□□ -0.17
VSX1-201ENST00000376707 SCO2A0A1W2PP80 73 aa13.99□□□□□ -0.17
VSX1-201ENST00000376707 PFDN1O60925 122 aa13.99□□□□□ -0.17
VSX1-201ENST00000376707 DAZ4Q86SG3 579 aaKnown RBP13.99□□□□□ -0.17
VSX1-201ENST00000376707 DAZ3Q9NR90 486 aaKnown RBP13.99□□□□□ -0.17
VSX1-201ENST00000376707 FAT1Q14517 4588 aa13.99□□□□□ -0.17
VSX1-201ENST00000376707 ZFP82Q8N141 532 aa13.98□□□□□ -0.17
VSX1-201ENST00000376707 M0R381 172 aa13.97□□□□□ -0.17
VSX1-201ENST00000376707 BAGE2Q86Y30 109 aa13.97□□□□□ -0.17
VSX1-201ENST00000376707 URGCP-MRPS24S4R325 110 aa13.97□□□□□ -0.17
VSX1-201ENST00000376707 A0A087WWL8 130 aa13.96□□□□□ -0.17
VSX1-201ENST00000376707 TRAV1-1A0A0B4J248 108 aa13.96□□□□□ -0.17
VSX1-201ENST00000376707 CXCL1P09341 107 aa13.96□□□□□ -0.17
VSX1-201ENST00000376707 WFDC2Q14508 124 aa13.96□□□□□ -0.17
VSX1-201ENST00000376707 LECT2O14960 151 aa13.95□□□□□ -0.18
VSX1-201ENST00000376707 RAB5CP51148 216 aa13.95□□□□□ -0.18
VSX1-201ENST00000376707 MANBALQ9NQG1 85 aa13.95□□□□□ -0.18
VSX1-201ENST00000376707 CCL20P78556 96 aa13.94□□□□□ -0.18
VSX1-201ENST00000376707 FAM30AQ9NZY2 134 aa13.94□□□□□ -0.18
VSX1-201ENST00000376707 COX11Q9Y6N1 276 aa13.94□□□□□ -0.18
VSX1-201ENST00000376707 TRBV10-1A0A0K0K1A3 114 aa13.93□□□□□ -0.18
VSX1-201ENST00000376707 C1QBP02746 253 aa13.93□□□□□ -0.18
VSX1-201ENST00000376707 RPL19P84098 196 aaKnown RBP13.93□□□□□ -0.18
VSX1-201ENST00000376707 EIF5AL1Q6IS14 154 aaKnown RBP13.93□□□□□ -0.18
VSX1-201ENST00000376707 NIT1Q86X76 327 aa13.93□□□□□ -0.18
VSX1-201ENST00000376707 C11orf52Q96A22 123 aa13.93□□□□□ -0.18
VSX1-201ENST00000376707 RMI2Q96E14 147 aa13.93□□□□□ -0.18
VSX1-201ENST00000376707 SSBP4Q9BWG4 385 aaPredicted RBP13.93□□□□□ -0.18
VSX1-201ENST00000376707 RPL35P42766 123 aaKnown RBP13.92□□□□□ -0.18
VSX1-201ENST00000376707 TCTE3Q8IZS6 198 aa13.92□□□□□ -0.18
VSX1-201ENST00000376707 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.91□□□□□ -0.18
VSX1-201ENST00000376707 SNAI2O43623 268 aa13.91□□□□□ -0.18
VSX1-201ENST00000376707 OR5AL1P0C617 328 aa13.91□□□□□ -0.18
VSX1-201ENST00000376707 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
VSX1-201ENST00000376707 OR10AG1Q8NH19 301 aa13.91□□□□□ -0.18
VSX1-201ENST00000376707 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
VSX1-201ENST00000376707 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
VSX1-201ENST00000376707 GNG13Q9P2W3 67 aa13.91□□□□□ -0.18
VSX1-201ENST00000376707 A0A087WX48 190 aa13.9□□□□□ -0.18
VSX1-201ENST00000376707 KCNIP4Q6PIL6 250 aa13.9□□□□□ -0.18
VSX1-201ENST00000376707 DERL1Q9BUN8 251 aa13.9□□□□□ -0.18
VSX1-201ENST00000376707 KLK12Q9UKR0 248 aa13.9□□□□□ -0.18
VSX1-201ENST00000376707 HERC1Q15751 4861 aa13.9□□□□□ -0.19
VSX1-201ENST00000376707 VPS13BQ7Z7G8 4022 aa13.89□□□□□ -0.19
VSX1-201ENST00000376707 IGKV2D-24A0A075B6R9 120 aa13.89□□□□□ -0.19
VSX1-201ENST00000376707 SULT1A2P50226 295 aa13.89□□□□□ -0.19
VSX1-201ENST00000376707 RAB4BP61018 213 aa13.89□□□□□ -0.19
VSX1-201ENST00000376707 PRR27Q6MZM9 219 aa13.89□□□□□ -0.19
VSX1-201ENST00000376707 OR10G8Q8NGN5 311 aa13.89□□□□□ -0.19
VSX1-201ENST00000376707 DMBT1Q9UGM3 2413 aaPredicted RBP13.88□□□□□ -0.19
VSX1-201ENST00000376707 TRBV7-3A0A075B6L6 115 aa13.88□□□□□ -0.19
VSX1-201ENST00000376707 TEX46H3BTG2 121 aa13.88□□□□□ -0.19
VSX1-201ENST00000376707 UBE2D3P61077 147 aa13.88□□□□□ -0.19
VSX1-201ENST00000376707 UBE2D2P62837 147 aa13.88□□□□□ -0.19
VSX1-201ENST00000376707 ELOBQ15370 118 aa13.88□□□□□ -0.19
VSX1-201ENST00000376707 UBE2WQ96B02 151 aa13.88□□□□□ -0.19
VSX1-201ENST00000376707 CHCHD7Q9BUK0 85 aa13.88□□□□□ -0.19
VSX1-201ENST00000376707 DNAJC30Q96LL9 226 aa13.87□□□□□ -0.19
VSX1-201ENST00000376707 ZNF56Q15929 161 aa13.86□□□□□ -0.19
VSX1-201ENST00000376707 CENPWQ5EE01 88 aa13.86□□□□□ -0.19
VSX1-201ENST00000376707 Q6ZSA8 131 aa13.86□□□□□ -0.19
VSX1-201ENST00000376707 Q8N976 141 aa13.86□□□□□ -0.19
VSX1-201ENST00000376707 SRRM2Q9UQ35 2752 aaKnown RBP13.85□□□□□ -0.19
VSX1-201ENST00000376707 RBFOX3A6NFN3 312 aa13.85□□□□□ -0.19
VSX1-201ENST00000376707 IGLV2-8P01709 118 aa13.85□□□□□ -0.19
VSX1-201ENST00000376707 MEF2BQ02080 365 aaPredicted RBP13.85□□□□□ -0.19
VSX1-201ENST00000376707 SPANXN1Q5VSR9 72 aa13.85□□□□□ -0.19
VSX1-201ENST00000376707 SLC51BQ86UW2 128 aa13.85□□□□□ -0.19
VSX1-201ENST00000376707 SMIM12Q96EX1 92 aa13.85□□□□□ -0.19
VSX1-201ENST00000376707 TMEM262E9PQX1 116 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms