RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ZNF462Q96JM2 2506 aa6.24□□□□□ -1.41
UBR4-202ENST00000375224 SEC61GP60059 68 aa6.24□□□□□ -1.41
UBR4-202ENST00000375224 TWIST1Q15672 202 aa6.24□□□□□ -1.41
UBR4-202ENST00000375224 PCP2Q8IVA1 136 aa6.24□□□□□ -1.41
UBR4-202ENST00000375224 CNFNQ9BYD5 112 aa6.24□□□□□ -1.41
UBR4-202ENST00000375224 RHPN1-AS1Q9BWJ2 59 aa6.24□□□□□ -1.41
UBR4-202ENST00000375224 ELANEP08246 267 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 SCGB1C2P0DMR2 95 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 RRN3P1Q2M238 152 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 ORMDL3Q8N138 153 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 U3KQK5 164 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 FAM208BQ5VWN6 2430 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 TRAV4A0A0B4J268 109 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 RPL11P62913 178 aaKnown RBP6.23□□□□□ -1.41
UBR4-202ENST00000375224 NFE4Q86UQ8 179 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 CEND1Q8N111 149 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 MAPK1IP1LQ8NDC0 245 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 URB1-AS1Q96HZ7 61 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 HIST1H4GQ99525 98 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 ANKRD17O75179 2603 aaKnown RBP6.23□□□□□ -1.41
UBR4-202ENST00000375224 SOCS3O14543 225 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 KRTAP10-9P60411 292 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 CACNG7P62955 275 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 C12orf74Q32Q52 190 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 Q6Q795 121 aa6.23□□□□□ -1.41
UBR4-202ENST00000375224 FHL3Q13643 280 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 PSMG4Q5JS54 123 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 TMEM101Q96IK0 257 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 CHD6Q8TD26 2715 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 Q96MF0 132 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 DUX3Q96PT4 197 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 ZNF747Q9BV97 191 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
UBR4-202ENST00000375224 CFAP126Q5VTH2 177 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 C20orf173Q96LM9 149 aa6.22□□□□□ -1.41
UBR4-202ENST00000375224 PRRC2AP48634 2157 aaKnown RBP6.21□□□□□ -1.41
UBR4-202ENST00000375224 CSPG4Q6UVK1 2322 aa6.21□□□□□ -1.41
UBR4-202ENST00000375224 TRAV21A0A0B4J279 112 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 D6R8Y8 96 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 CKS2P33552 79 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 AMN1Q8IY45 258 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 C18orf15Q96N68 181 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 CR1P17927 2039 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 IGKV3D-20A0A0C4DH25 116 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 ATP5LO75964 103 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 KIR2DL5BQ8NHK3 375 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
UBR4-202ENST00000375224 LGALS1P09382 135 aaKnown RBP6.2□□□□□ -1.42
UBR4-202ENST00000375224 HERVK_113P63121 156 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 LGALS9BQ3B8N2 356 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 LGALS9CQ6DKI2 356 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 K7EMI3 77 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 HOXA3O43365 443 aaPredicted RBP6.2□□□□□ -1.42
UBR4-202ENST00000375224 NDUFA7O95182 113 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 ZNF575Q86XF7 245 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 UBE2E2Q96LR5 201 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 ZNF702PQ9H963 129 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 UBR5O95071 2799 aaPredicted RBP6.2□□□□□ -1.42
UBR4-202ENST00000375224 LGALS9O00182 355 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 ZNF415Q09FC8 603 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 TMEM86BQ8N661 226 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 RNF152Q8N8N0 203 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 C15orf53Q8NAA6 179 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 RASL10AQ92737 203 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 CHCHD5Q9BSY4 110 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 MDFICQ9P1T7 246 aa6.2□□□□□ -1.42
UBR4-202ENST00000375224 IGHV4-4A0A075B6R2 117 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 A0A1B0GX51 115 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 NCR2O95944 276 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 MYOZ3Q8TDC0 251 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 PHLDA1Q8WV24 401 aaPredicted RBP6.19□□□□□ -1.42
UBR4-202ENST00000375224 LRRK2Q5S007 2527 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 V9GYY9 64 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 ASH1LQ9NR48 2969 aaKnown RBP6.19□□□□□ -1.42
UBR4-202ENST00000375224 MED14OSP0DP75 135 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 IFI27P40305 119 aaPredicted RBP6.19□□□□□ -1.42
UBR4-202ENST00000375224 APRG1Q8IVJ8 170 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 Q8N2B8 174 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 ZFAND2AQ8N6M9 145 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 FAM19A4Q96LR4 140 aa6.19□□□□□ -1.42
UBR4-202ENST00000375224 TRAV2A0A0B4J234 112 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 TRAV8-4A0A0B4J246 113 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 SPANXN1Q5VSR9 72 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 GAGE2AQ6NT46 116 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 NOTCH2Q04721 2471 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 LOC389332A0A1B0GUA5 103 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 SNRPD3P62318 126 aaKnown RBP6.18□□□□□ -1.42
UBR4-202ENST00000375224 HRCT1Q6UXD1 115 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 RNF185Q96GF1 192 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 CARD19Q96LW7 228 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 NXT2Q9NPJ8 142 aaKnown RBP6.18□□□□□ -1.42
UBR4-202ENST00000375224 ZNF256Q9Y2P7 627 aaPredicted RBP6.18□□□□□ -1.42
UBR4-202ENST00000375224 IGKV3-7A0A075B6H7 116 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 TRBV25-1A0A075B6N4 114 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 DUSP14O95147 198 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms