RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 A0A087WW49 117 aa10.45□□□□□ -0.74
HMGCL-203ENST00000374490 SMIM13P0DJ93 91 aa10.45□□□□□ -0.74
HMGCL-203ENST00000374490 TCTAP57738 103 aa10.45□□□□□ -0.74
HMGCL-203ENST00000374490 KRTAP1-1Q07627 177 aa10.45□□□□□ -0.74
HMGCL-203ENST00000374490 DEFB112Q30KQ8 113 aa10.45□□□□□ -0.74
HMGCL-203ENST00000374490 ERASQ7Z444 233 aa10.45□□□□□ -0.74
HMGCL-203ENST00000374490 IGKV3-7A0A075B6H7 116 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 TRBV25-1A0A075B6N4 114 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 LINC01619G3V211 115 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 GNRH2O43555 120 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 SNRPD3P62318 126 aaKnown RBP10.44□□□□□ -0.74
HMGCL-203ENST00000374490 LCNL1Q6ZST4 164 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 YAE1D1Q9NRH1 226 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 CHTOPQ9Y3Y2 248 aaKnown RBP10.44□□□□□ -0.74
HMGCL-203ENST00000374490 K7EP34 96 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 LGALS9O00182 355 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 ELANEP08246 267 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 DEFB1P60022 68 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 C2orf66Q6UXQ4 117 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
HMGCL-203ENST00000374490 RNASE8Q8TDE3 154 aaKnown RBP10.44□□□□□ -0.74
HMGCL-203ENST00000374490 RPL39LQ96EH5 51 aaKnown RBP10.44□□□□□ -0.74
HMGCL-203ENST00000374490 H3BUT2 72 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 DUSP14O95147 198 aaKnown RBP10.43□□□□□ -0.74
HMGCL-203ENST00000374490 FSHBP01225 129 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 IGHV4-59P01825 116 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 GCSHP23434 173 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 CDKN1BP46527 198 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 UFSP1Q6NVU6 142 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 TEX29Q8N6K0 151 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 OR5A1Q8NGJ0 315 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 KIF25-AS1Q9Y6Z4 181 aa10.43□□□□□ -0.74
HMGCL-203ENST00000374490 LGALS1P09382 135 aaKnown RBP10.42□□□□□ -0.74
HMGCL-203ENST00000374490 CEND1Q8N111 149 aa10.42□□□□□ -0.74
HMGCL-203ENST00000374490 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
HMGCL-203ENST00000374490 CSTL1Q9H114 145 aa10.42□□□□□ -0.74
HMGCL-203ENST00000374490 TLN2Q9Y4G6 2542 aa10.42□□□□□ -0.74
HMGCL-203ENST00000374490 OR11H12B2RN74 326 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 K7EQG2 157 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 RBX1P62877 108 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 PAPPA-AS1Q5QFB9 102 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 OR11H1Q8NG94 326 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 OR11H2Q8NH07 326 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 C9orf85Q96MD7 179 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 VPREB3Q9UKI3 123 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 CYSLTR1Q9Y271 337 aa10.41□□□□□ -0.74
HMGCL-203ENST00000374490 A0A0J9YX75 114 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 A0A1W2PPM0 123 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 VCYO14598 125 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 CD7P09564 240 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 FABP2P12104 132 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 SRD5A1P18405 259 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 LINC00315P59091 139 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 TMEM95Q3KNT9 176 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 RNF152Q8N8N0 203 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 BAALCQ8WXS3 180 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
HMGCL-203ENST00000374490 TRBV6-5A0A0K0K1A5 114 aa10.4□□□□□ -0.75
HMGCL-203ENST00000374490 OCIAD2Q56VL3 154 aa10.4□□□□□ -0.75
HMGCL-203ENST00000374490 TMEM141Q96I45 108 aa10.4□□□□□ -0.75
HMGCL-203ENST00000374490 IGHV3-16A0A0C4DH30 117 aa10.39□□□□□ -0.75
HMGCL-203ENST00000374490 SPRY2O43597 315 aa10.39□□□□□ -0.75
HMGCL-203ENST00000374490 POLR2KP53803 58 aaKnown RBP10.39□□□□□ -0.75
HMGCL-203ENST00000374490 FXYD2P54710 66 aa10.39□□□□□ -0.75
HMGCL-203ENST00000374490 SUMO4Q6EEV6 95 aa10.39□□□□□ -0.75
HMGCL-203ENST00000374490 KIR2DL4Q99706 377 aa10.39□□□□□ -0.75
HMGCL-203ENST00000374490 ANK3Q12955 4377 aaKnown RBP10.38□□□□□ -0.75
HMGCL-203ENST00000374490 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 MYMXA0A1B0GTQ4 84 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 E9PLD3 99 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 K7ERU9 68 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 SAMD5Q5TGI4 173 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 Q6YL49 198 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 RAB37Q96AX2 223 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 SPCS1Q9Y6A9 102 aa10.38□□□□□ -0.75
HMGCL-203ENST00000374490 ATRQ13535 2644 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 PRSS29PA6NIE9 313 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 EDN2P20800 178 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 HERVK_113P61574 105 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 FOXI2Q6ZQN5 318 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 MAPKAPK5-AS1Q8N8E1 139 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 TIMM17AQ99595 171 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 COL6A5A8TX70 2615 aa10.37□□□□□ -0.75
HMGCL-203ENST00000374490 FBN1P35555 2871 aaKnown RBP10.37□□□□□ -0.75
HMGCL-203ENST00000374490 TRGV11A0A075B6L2 103 aa10.36□□□□□ -0.75
HMGCL-203ENST00000374490 ZFP2Q6ZN57 461 aa10.36□□□□□ -0.75
HMGCL-203ENST00000374490 TRBV27A0A0K0K1C4 114 aa10.36□□□□□ -0.75
HMGCL-203ENST00000374490 F5H697 171 aa10.36□□□□□ -0.75
HMGCL-203ENST00000374490 RHOHQ15669 191 aa10.36□□□□□ -0.75
HMGCL-203ENST00000374490 PHLDA1Q8WV24 401 aaPredicted RBP10.36□□□□□ -0.75
HMGCL-203ENST00000374490 HIST1H4GQ99525 98 aa10.36□□□□□ -0.75
HMGCL-203ENST00000374490 ZNF702PQ9H963 129 aa10.36□□□□□ -0.75
HMGCL-203ENST00000374490 STAB1Q9NY15 2570 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms