RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 DNLZQ5SXM8 178 aa8.97□□□□□ -0.97
CXCL12-202ENST00000374426 Q86TA4 180 aa8.97□□□□□ -0.97
CXCL12-202ENST00000374426 CHCHD7Q9BUK0 85 aa8.97□□□□□ -0.97
CXCL12-202ENST00000374426 ACTR3CQ9C0K3 210 aaPredicted RBP8.97□□□□□ -0.97
CXCL12-202ENST00000374426 A0A087WWL8 130 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 A0A087WX48 190 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 KRBOX1C9JBD0 128 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 M0R036 132 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 OR11H4Q8NGC9 324 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 ZC2HC1AQ96GY0 325 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 SFRP2Q96HF1 295 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 AQP10Q96PS8 301 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 TNFSF18Q9UNG2 199 aa8.96□□□□□ -0.98
CXCL12-202ENST00000374426 GRIFINA4D1Z8 144 aa8.95□□□□□ -0.98
CXCL12-202ENST00000374426 PEX7O00628 323 aa8.95□□□□□ -0.98
CXCL12-202ENST00000374426 IFNA7P01567 189 aa8.95□□□□□ -0.98
CXCL12-202ENST00000374426 ELOBQ15370 118 aa8.95□□□□□ -0.98
CXCL12-202ENST00000374426 ZNF726P1Q15940 193 aa8.95□□□□□ -0.98
CXCL12-202ENST00000374426 TRBV10-1A0A0K0K1A3 114 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 SH2D1AO60880 128 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 DEFA1P59665 94 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 DEFA3P59666 94 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 UBE2G2P60604 165 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 UBE2D3P61077 147 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 UBE2D2P62837 147 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 ENHOQ6UWT2 76 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 COX8CQ7Z4L0 72 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 PHLDA3Q9Y5J5 127 aa8.94□□□□□ -0.98
CXCL12-202ENST00000374426 M0R381 172 aa8.93□□□□□ -0.98
CXCL12-202ENST00000374426 RPL36AP83881 106 aaKnown RBP8.93□□□□□ -0.98
CXCL12-202ENST00000374426 Q0VG73 95 aa8.93□□□□□ -0.98
CXCL12-202ENST00000374426 C14orf177Q52M58 125 aa8.93□□□□□ -0.98
CXCL12-202ENST00000374426 KCNIP4Q6PIL6 250 aa8.93□□□□□ -0.98
CXCL12-202ENST00000374426 RPL36ALQ969Q0 106 aaKnown RBP8.93□□□□□ -0.98
CXCL12-202ENST00000374426 C1orf43Q9BWL3 253 aa8.93□□□□□ -0.98
CXCL12-202ENST00000374426 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
CXCL12-202ENST00000374426 TRBV7-3A0A075B6L6 115 aa8.92□□□□□ -0.98
CXCL12-202ENST00000374426 FAM74A7A6NL05 159 aa8.92□□□□□ -0.98
CXCL12-202ENST00000374426 TPT1P13693 172 aaKnown RBP8.92□□□□□ -0.98
CXCL12-202ENST00000374426 HNRNPA3P51991 378 aaKnown RBP8.92□□□□□ -0.98
CXCL12-202ENST00000374426 Q5BKY6 102 aa8.92□□□□□ -0.98
CXCL12-202ENST00000374426 FAM162BQ5T6X4 162 aa8.92□□□□□ -0.98
CXCL12-202ENST00000374426 HIST1H2BAQ96A08 127 aa8.92□□□□□ -0.98
CXCL12-202ENST00000374426 ZFP30Q9Y2G7 519 aa8.92□□□□□ -0.98
CXCL12-202ENST00000374426 ALG5Q9Y673 324 aa8.92□□□□□ -0.98
CXCL12-202ENST00000374426 TMSB15BA0A087X1C1 80 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 CTXND1A0A1B0GTU2 59 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 TMEM262E9PQX1 116 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 RPL37AP61513 92 aaKnown RBP8.91□□□□□ -0.98
CXCL12-202ENST00000374426 ZNF674Q2M3X9 581 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 LINC01559Q495D7 138 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 MPV17L2Q567V2 206 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 RPL7L1Q6DKI1 246 aaKnown RBP8.91□□□□□ -0.98
CXCL12-202ENST00000374426 ZFP82Q8N141 532 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 C15orf54Q8N8G6 183 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 OR10G8Q8NGN5 311 aa8.91□□□□□ -0.98
CXCL12-202ENST00000374426 USP17L23D6RBM5 183 aa8.9□□□□□ -0.98
CXCL12-202ENST00000374426 DAZAP1Q96EP5 407 aaKnown RBP8.9□□□□□ -0.98
CXCL12-202ENST00000374426 NKX6-2Q9C056 277 aaPredicted RBP8.9□□□□□ -0.98
CXCL12-202ENST00000374426 CRPP02741 224 aa8.89□□□□□ -0.99
CXCL12-202ENST00000374426 FMC1Q96HJ9 113 aa8.89□□□□□ -0.99
CXCL12-202ENST00000374426 A6NHS1 94 aa8.88□□□□□ -0.99
CXCL12-202ENST00000374426 LTAP01374 205 aa8.88□□□□□ -0.99
CXCL12-202ENST00000374426 HLA-DQA1P01909 254 aa8.88□□□□□ -0.99
CXCL12-202ENST00000374426 ANGP03950 147 aaKnown RBP8.88□□□□□ -0.99
CXCL12-202ENST00000374426 PRSS1P07477 247 aa8.88□□□□□ -0.99
CXCL12-202ENST00000374426 UBE2G1P62253 170 aa8.88□□□□□ -0.99
CXCL12-202ENST00000374426 PRR27Q6MZM9 219 aa8.88□□□□□ -0.99
CXCL12-202ENST00000374426 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
CXCL12-202ENST00000374426 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
CXCL12-202ENST00000374426 TRBV6-1A0A0K0K1D8 114 aa8.87□□□□□ -0.99
CXCL12-202ENST00000374426 PANO1I0J062 215 aa8.87□□□□□ -0.99
CXCL12-202ENST00000374426 PTTG1O95997 202 aa8.87□□□□□ -0.99
CXCL12-202ENST00000374426 RAB4BP61018 213 aa8.87□□□□□ -0.99
CXCL12-202ENST00000374426 C9orf163Q8N9P6 203 aa8.87□□□□□ -0.99
CXCL12-202ENST00000374426 INO80EQ8NBZ0 244 aaPredicted RBP8.87□□□□□ -0.99
CXCL12-202ENST00000374426 MED28Q9H204 178 aa8.87□□□□□ -0.99
CXCL12-202ENST00000374426 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
CXCL12-202ENST00000374426 ZNF56Q15929 161 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 MIAQ16674 131 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 AKR1C8PQ5T2L2 129 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 DGAT2L7PQ6IED9 249 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 KRTAP26-1Q6PEX3 210 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 NTM-AS1Q6ZSK4 140 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 OR10AG1Q8NH19 301 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 CHCHD5Q9BSY4 110 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 PRR34Q9NV39 138 aa8.86□□□□□ -0.99
CXCL12-202ENST00000374426 MAP1LC3B2A6NCE7 125 aa8.85□□□□□ -0.99
CXCL12-202ENST00000374426 MT1HL1P0DM35 61 aa8.85□□□□□ -0.99
CXCL12-202ENST00000374426 RPL19P84098 196 aaKnown RBP8.85□□□□□ -0.99
CXCL12-202ENST00000374426 LRP2P98164 4655 aa8.85□□□□□ -0.99
CXCL12-202ENST00000374426 TCEAL7Q9BRU2 100 aa8.85□□□□□ -0.99
CXCL12-202ENST00000374426 MAP1LC3BQ9GZQ8 125 aa8.85□□□□□ -0.99
CXCL12-202ENST00000374426 FXYD6-FXYD2A0A087WZ82 144 aa8.84□□□□□ -0.99
CXCL12-202ENST00000374426 GIPP09681 153 aaPredicted RBP8.84□□□□□ -0.99
CXCL12-202ENST00000374426 FHITP49789 147 aa8.84□□□□□ -0.99
CXCL12-202ENST00000374426 PKIAP61925 76 aa8.84□□□□□ -0.99
CXCL12-202ENST00000374426 CST9LP1Q5W188 147 aa8.84□□□□□ -0.99
CXCL12-202ENST00000374426 CLPSL2Q6UWE3 100 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms