RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 HIST1H4GQ99525 98 aa11.6□□□□□ -0.55
TMEM50A-201ENST00000374358 TP53TG1Q9Y2A0 90 aa11.6□□□□□ -0.55
TMEM50A-201ENST00000374358 MED14OSP0DP75 135 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 FABP2P12104 132 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 ID1P41134 155 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 NXPH4O95158 308 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 CRYGDP07320 174 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 OR11H1Q8NG94 326 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 OR11H2Q8NH07 326 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 TM2D2Q9BX73 214 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 NF1P21359 2839 aa11.59□□□□□ -0.55
TMEM50A-201ENST00000374358 AKAP9Q99996 3911 aa11.58□□□□□ -0.56
TMEM50A-201ENST00000374358 K7EMT4 169 aa11.58□□□□□ -0.56
TMEM50A-201ENST00000374358 SLC25A16P16260 332 aa11.58□□□□□ -0.56
TMEM50A-201ENST00000374358 Q8N1Y9 231 aa11.58□□□□□ -0.56
TMEM50A-201ENST00000374358 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
TMEM50A-201ENST00000374358 CYSLTR1Q9Y271 337 aa11.58□□□□□ -0.56
TMEM50A-201ENST00000374358 SETD2Q9BYW2 2564 aaPredicted RBP11.57□□□□□ -0.56
TMEM50A-201ENST00000374358 IGHV4OR15-8A0A075B7B6 117 aa11.57□□□□□ -0.56
TMEM50A-201ENST00000374358 A0A087WW49 117 aa11.57□□□□□ -0.56
TMEM50A-201ENST00000374358 DEFB136Q30KP8 78 aa11.57□□□□□ -0.56
TMEM50A-201ENST00000374358 CD300EQ496F6 205 aaPredicted RBP11.57□□□□□ -0.56
TMEM50A-201ENST00000374358 KLHL30-AS1Q8NEE0 82 aa11.57□□□□□ -0.56
TMEM50A-201ENST00000374358 ZNF256Q9Y2P7 627 aaPredicted RBP11.57□□□□□ -0.56
TMEM50A-201ENST00000374358 ZFP2Q6ZN57 461 aa11.57□□□□□ -0.56
TMEM50A-201ENST00000374358 TRBV7-9A0A0J9YWB2 115 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 A0A0J9YX75 114 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 MYMXA0A1B0GTQ4 84 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 C18orf65Q6ZTR6 163 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 PLEKHB2Q96CS7 222 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 CHD6Q8TD26 2715 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 PRM2P04554 102 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 LGALS1P09382 135 aaKnown RBP11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 HTN1P15515 57 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 MTURNQ8N3F0 131 aa11.56□□□□□ -0.56
TMEM50A-201ENST00000374358 A0A096LNT2 108 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 IGHV3-16A0A0C4DH30 117 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 C11orf86A6NJI1 115 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 POLR2KP53803 58 aaKnown RBP11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 POM121L12Q8N7R1 296 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 LINC01356Q8N9X3 169 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 BEX4Q9NWD9 120 aaPredicted RBP11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 WNK1Q9H4A3 2382 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 TRBV7-3A0A075B6L6 115 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 K7ERU9 68 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 RIPPLY3P57055 190 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 ZNF56Q15929 161 aa11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 OPRPNQ99935 248 aaPredicted RBP11.55□□□□□ -0.56
TMEM50A-201ENST00000374358 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 K7EQG2 157 aa11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 C12orf74Q32Q52 190 aa11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 ZNF815PA8K554 130 aa11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 HOXD3P31249 432 aaPredicted RBP11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 NIPBLQ6KC79 2804 aaeCLIP11.54□□□□□ -0.56
TMEM50A-201ENST00000374358 IGIPA6NJ69 53 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 IGLL5B9A064 214 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 DUX3Q96PT4 197 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 UBR5O95071 2799 aaPredicted RBP11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 CCDC168Q8NDH2 2452 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 NOTCH3Q9UM47 2321 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 E9PLD3 99 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 KRTAP10-9P60411 292 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 SCGB2A2Q13296 93 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 OR5A1Q8NGJ0 315 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 ZNF479Q96JC4 524 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 C9orf85Q96MD7 179 aa11.53□□□□□ -0.56
TMEM50A-201ENST00000374358 CR1P17927 2039 aa11.52□□□□□ -0.56
TMEM50A-201ENST00000374358 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 GATA3P23771 443 aa11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 KNCNA6PVL3 124 aa11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 HOXA3O43365 443 aaPredicted RBP11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 PPP1R17O96001 155 aa11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 SFTA2Q6UW10 78 aa11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.57
TMEM50A-201ENST00000374358 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 SLURP1P55000 103 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 ZNF702PQ9H963 129 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 ZNF580Q9UK33 172 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 VPREB3Q9UKI3 123 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 IGHV1OR15-1A0A075B7D0 117 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 H3BMG7 143 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 COX6B1P14854 86 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 TSPEAR-AS2P59090 65 aa11.51□□□□□ -0.57
TMEM50A-201ENST00000374358 APCP25054 2843 aa11.5□□□□□ -0.57
TMEM50A-201ENST00000374358 M0QY20 66 aa11.5□□□□□ -0.57
TMEM50A-201ENST00000374358 VCYO14598 125 aa11.5□□□□□ -0.57
TMEM50A-201ENST00000374358 RPL24P83731 157 aaKnown RBP11.5□□□□□ -0.57
TMEM50A-201ENST00000374358 ZNF876PQ49A33 203 aa11.5□□□□□ -0.57
TMEM50A-201ENST00000374358 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
TMEM50A-201ENST00000374358 PRRC2AP48634 2157 aaKnown RBP11.5□□□□□ -0.57
TMEM50A-201ENST00000374358 LGALS9O00182 355 aa11.5□□□□□ -0.57
TMEM50A-201ENST00000374358 P0DMU3 169 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms