RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
PTPN20-203ENST00000374342 ATOH7Q8N100 152 aa12.35□□□□□ -0.43
PTPN20-203ENST00000374342 IGLV2-18A0A075B6J9 118 aa12.34□□□□□ -0.43
PTPN20-203ENST00000374342 LINC01546A6NGU7 62 aa12.34□□□□□ -0.43
PTPN20-203ENST00000374342 ZNF876PQ49A33 203 aa12.34□□□□□ -0.43
PTPN20-203ENST00000374342 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
PTPN20-203ENST00000374342 TMEM208Q9BTX3 173 aa12.34□□□□□ -0.43
PTPN20-203ENST00000374342 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
PTPN20-203ENST00000374342 PAM16Q9Y3D7 125 aa12.34□□□□□ -0.43
PTPN20-203ENST00000374342 F5H697 171 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 NUTF2P61970 127 aaKnown RBP12.33□□□□□ -0.44
PTPN20-203ENST00000374342 SUMO4Q6EEV6 95 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 CITED1Q99966 193 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 FAM110AQ9BQ89 295 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 ZNF747Q9BV97 191 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 C19orf73Q9NVV2 129 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 IGHV3OR16-12A0A075B7B8 117 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 KIR2DL5BA0A0G2JN68 375 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 KIR2DL5BA0A0G2JPC4 375 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 PRSS47A8MTI9 375 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 SUMO2P61956 95 aaKnown RBP12.33□□□□□ -0.44
PTPN20-203ENST00000374342 ZNF56Q15929 161 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 KIR2DL5AQ8N109 375 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 SPATA3Q8NHX4 192 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 LINC00467Q9BRT7 94 aa12.33□□□□□ -0.44
PTPN20-203ENST00000374342 DEFB125Q8N687 156 aa12.32□□□□□ -0.44
PTPN20-203ENST00000374342 C20orf202A1L168 122 aa12.31□□□□□ -0.44
PTPN20-203ENST00000374342 TCAPO15273 167 aa12.31□□□□□ -0.44
PTPN20-203ENST00000374342 RPL35AP18077 110 aaKnown RBP12.31□□□□□ -0.44
PTPN20-203ENST00000374342 TMEM158Q8WZ71 300 aa12.31□□□□□ -0.44
PTPN20-203ENST00000374342 C20orf78Q9BR46 151 aa12.31□□□□□ -0.44
PTPN20-203ENST00000374342 TENM1Q9UKZ4 2725 aa12.31□□□□□ -0.44
PTPN20-203ENST00000374342 JMJD1CQ15652 2540 aa12.3□□□□□ -0.44
PTPN20-203ENST00000374342 PPP1R17O96001 155 aa12.3□□□□□ -0.44
PTPN20-203ENST00000374342 CRYGDP07320 174 aa12.3□□□□□ -0.44
PTPN20-203ENST00000374342 DDTP30046 118 aa12.3□□□□□ -0.44
PTPN20-203ENST00000374342 FCER1GP30273 86 aa12.3□□□□□ -0.44
PTPN20-203ENST00000374342 PET117Q6UWS5 81 aa12.3□□□□□ -0.44
PTPN20-203ENST00000374342 C1orf158Q8N1D5 194 aa12.3□□□□□ -0.44
PTPN20-203ENST00000374342 C11orf72Q8NBR9 251 aa12.3□□□□□ -0.44
PTPN20-203ENST00000374342 MCRIP2Q9BUT9 160 aaKnown RBP12.3□□□□□ -0.44
PTPN20-203ENST00000374342 M0R2P5 195 aa12.29□□□□□ -0.44
PTPN20-203ENST00000374342 LAGE3Q14657 143 aa12.29□□□□□ -0.44
PTPN20-203ENST00000374342 C9orf66Q5T8R8 295 aa12.29□□□□□ -0.44
PTPN20-203ENST00000374342 SPATA45Q537H7 98 aa12.29□□□□□ -0.44
PTPN20-203ENST00000374342 C18orf15Q96N68 181 aa12.29□□□□□ -0.44
PTPN20-203ENST00000374342 ST20Q9HBF5 79 aa12.28□□□□□ -0.44
PTPN20-203ENST00000374342 BAHCC1Q9P281 2608 aa12.28□□□□□ -0.44
PTPN20-203ENST00000374342 NACAE9PAV3 2078 aa12.27□□□□□ -0.44
PTPN20-203ENST00000374342 INSL3P51460 131 aa12.27□□□□□ -0.44
PTPN20-203ENST00000374342 MAJINQ3KP22 176 aa12.27□□□□□ -0.44
PTPN20-203ENST00000374342 IFI27L1Q96BM0 104 aa12.27□□□□□ -0.44
PTPN20-203ENST00000374342 PMCHL2Q9BQD1 86 aa12.27□□□□□ -0.44
PTPN20-203ENST00000374342 CSTL1Q9H114 145 aa12.27□□□□□ -0.44
PTPN20-203ENST00000374342 TEP1Q99973 2627 aaKnown RBP12.27□□□□□ -0.45
PTPN20-203ENST00000374342 GIG44P09565 113 aaPredicted RBP12.27□□□□□ -0.45
PTPN20-203ENST00000374342 AZU1P20160 251 aa12.27□□□□□ -0.45
PTPN20-203ENST00000374342 LINC01545Q5VT33 79 aa12.27□□□□□ -0.45
PTPN20-203ENST00000374342 ZNF705AQ6ZN79 300 aaPredicted RBP12.27□□□□□ -0.45
PTPN20-203ENST00000374342 NEGR1Q7Z3B1 354 aa12.27□□□□□ -0.45
PTPN20-203ENST00000374342 GTSCR1Q86UQ5 136 aa12.27□□□□□ -0.45
PTPN20-203ENST00000374342 SPXQ9BT56 116 aa12.27□□□□□ -0.45
PTPN20-203ENST00000374342 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.45
PTPN20-203ENST00000374342 CYSRT1A8MQ03 144 aa12.26□□□□□ -0.45
PTPN20-203ENST00000374342 NUDT3O95989 172 aa12.26□□□□□ -0.45
PTPN20-203ENST00000374342 IGHV3-73A0A0B4J1V6 119 aa12.25□□□□□ -0.45
PTPN20-203ENST00000374342 GOLT1BQ9Y3E0 138 aa12.25□□□□□ -0.45
PTPN20-203ENST00000374342 ATRQ13535 2644 aa12.25□□□□□ -0.45
PTPN20-203ENST00000374342 VWFP04275 2813 aa12.25□□□□□ -0.45
PTPN20-203ENST00000374342 TRAV9-2A0A087WT02 112 aa12.25□□□□□ -0.45
PTPN20-203ENST00000374342 A8MWV9 139 aa12.25□□□□□ -0.45
PTPN20-203ENST00000374342 ORMDL2Q53FV1 153 aa12.25□□□□□ -0.45
PTPN20-203ENST00000374342 M0QY20 66 aa12.24□□□□□ -0.45
PTPN20-203ENST00000374342 MORN3Q6PF18 240 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-203ENST00000374342 C1QTNF4Q9BXJ3 329 aa12.24□□□□□ -0.45
PTPN20-203ENST00000374342 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
PTPN20-203ENST00000374342 PTH2Q96A98 100 aa12.23□□□□□ -0.45
PTPN20-203ENST00000374342 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
PTPN20-203ENST00000374342 RPL32P62910 135 aaKnown RBP12.23□□□□□ -0.45
PTPN20-203ENST00000374342 KRTAP24-1Q3LI83 254 aa12.23□□□□□ -0.45
PTPN20-203ENST00000374342 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
PTPN20-203ENST00000374342 IL17DQ8TAD2 202 aa12.23□□□□□ -0.45
PTPN20-203ENST00000374342 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
PTPN20-203ENST00000374342 K7EMI3 77 aa12.22□□□□□ -0.45
PTPN20-203ENST00000374342 DEFA6Q01524 100 aa12.22□□□□□ -0.45
PTPN20-203ENST00000374342 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
PTPN20-203ENST00000374342 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
PTPN20-203ENST00000374342 TRBV6-5A0A0K0K1A5 114 aa12.21□□□□□ -0.45
PTPN20-203ENST00000374342 hDV102S1A0JD36 115 aa12.21□□□□□ -0.45
PTPN20-203ENST00000374342 POLR2KP53803 58 aaKnown RBP12.21□□□□□ -0.45
PTPN20-203ENST00000374342 UFSP1Q6NVU6 142 aa12.21□□□□□ -0.45
PTPN20-203ENST00000374342 LGALS9BQ3B8N2 356 aa12.21□□□□□ -0.46
PTPN20-203ENST00000374342 LGALS9CQ6DKI2 356 aa12.21□□□□□ -0.46
PTPN20-203ENST00000374342 NDUFAF3Q9BU61 184 aa12.21□□□□□ -0.46
PTPN20-203ENST00000374342 TRGV1A0A0A0MS02 117 aa12.2□□□□□ -0.46
PTPN20-203ENST00000374342 H7C1H1 209 aa12.2□□□□□ -0.46
PTPN20-203ENST00000374342 ATP5LO75964 103 aa12.2□□□□□ -0.46
PTPN20-203ENST00000374342 IGLL1P15814 213 aa12.2□□□□□ -0.46
PTPN20-203ENST00000374342 HSBP1L1C9JCN9 74 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 RHODO00212 210 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms