RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 IGLC6P0CF74 106 aa13.45□□□□□ -0.26
TRAF3IP1-201ENST00000373327 MRAP2Q96G30 205 aa13.45□□□□□ -0.26
TRAF3IP1-201ENST00000373327 TRBV25-1A0A075B6N4 114 aa13.45□□□□□ -0.26
TRAF3IP1-201ENST00000373327 MRPS12O15235 138 aaKnown RBP13.45□□□□□ -0.26
TRAF3IP1-201ENST00000373327 AVPP01185 164 aa13.45□□□□□ -0.26
TRAF3IP1-201ENST00000373327 PGPEP1Q9NXJ5 209 aa13.45□□□□□ -0.26
TRAF3IP1-201ENST00000373327 CDKN1BP46527 198 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 EBI3Q14213 229 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 MDFICQ9P1T7 246 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 PRM2P04554 102 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 IGHV4OR15-8A0A075B7B6 117 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 A0A087WW49 117 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 IGKV2D-26A0A0A0MRZ7 120 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 F8VRH5 84 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 IGHG2P01859 326 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 GAGE1Q13065 139 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 PEMTQ9UBM1 199 aa13.44□□□□□ -0.26
TRAF3IP1-201ENST00000373327 IGHV1OR15-1A0A075B7D0 117 aa13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 OCIAD2Q56VL3 154 aa13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 OPRPNQ99935 248 aaPredicted RBP13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 SAP30O75446 220 aa13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 MEIG1Q5JSS6 88 aa13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 ZNF493Q6ZR52 646 aa13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 ZNF48Q96MX3 618 aaPredicted RBP13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 RBAKDNA6NC62 111 aa13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 CIDEAO60543 219 aa13.43□□□□□ -0.26
TRAF3IP1-201ENST00000373327 CFAP46Q8IYW2 2715 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 CLPSL1A2RUU4 121 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 CRXO43186 299 aaPredicted RBP13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 ODF1Q14990 250 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 C9orf118A6NHY6 69 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 DSCR9P59020 149 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 UBE2L6O14933 153 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 HLA-DRB4P13762 266 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 RNF185Q96GF1 192 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 HLA-DRB4X5D2U9 266 aa13.42□□□□□ -0.26
TRAF3IP1-201ENST00000373327 H3BMG7 143 aa13.41□□□□□ -0.26
TRAF3IP1-201ENST00000373327 ETDBQ3ZM63 59 aa13.41□□□□□ -0.26
TRAF3IP1-201ENST00000373327 TRGV11A0A075B6L2 103 aa13.41□□□□□ -0.26
TRAF3IP1-201ENST00000373327 A0A087WX48 190 aa13.41□□□□□ -0.26
TRAF3IP1-201ENST00000373327 TRBV6-1A0A0K0K1D8 114 aa13.41□□□□□ -0.26
TRAF3IP1-201ENST00000373327 Q8N1Y9 231 aa13.41□□□□□ -0.26
TRAF3IP1-201ENST00000373327 GATD1Q8NB37 220 aa13.41□□□□□ -0.26
TRAF3IP1-201ENST00000373327 SUMO4Q6EEV6 95 aa13.4□□□□□ -0.26
TRAF3IP1-201ENST00000373327 LYRM7Q5U5X0 104 aa13.4□□□□□ -0.26
TRAF3IP1-201ENST00000373327 COL27A1Q8IZC6 1860 aaPredicted RBP13.4□□□□□ -0.27
TRAF3IP1-201ENST00000373327 LINC01549A6NIU2 74 aa13.39□□□□□ -0.27
TRAF3IP1-201ENST00000373327 H3BRM9 83 aa13.39□□□□□ -0.27
TRAF3IP1-201ENST00000373327 A6NDX4 124 aa13.39□□□□□ -0.27
TRAF3IP1-201ENST00000373327 PF4P02776 101 aa13.39□□□□□ -0.27
TRAF3IP1-201ENST00000373327 SMAGPQ0VAQ4 97 aa13.39□□□□□ -0.27
TRAF3IP1-201ENST00000373327 PRORYQ9H606 182 aa13.39□□□□□ -0.27
TRAF3IP1-201ENST00000373327 TRAV13-1A0A0B4J241 112 aa13.39□□□□□ -0.27
TRAF3IP1-201ENST00000373327 C19orf54Q5BKX5 351 aa13.38□□□□□ -0.27
TRAF3IP1-201ENST00000373327 ADAMTSL5Q6ZMM2 481 aa13.38□□□□□ -0.27
TRAF3IP1-201ENST00000373327 VPREB3Q9UKI3 123 aa13.38□□□□□ -0.27
TRAF3IP1-201ENST00000373327 TMEM262E9PQX1 116 aa13.38□□□□□ -0.27
TRAF3IP1-201ENST00000373327 SMG1Q96Q15 3661 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP1-201ENST00000373327 GTSF1LQ9H1H1 148 aa13.38□□□□□ -0.27
TRAF3IP1-201ENST00000373327 PAX2Q02962 417 aa13.37□□□□□ -0.27
TRAF3IP1-201ENST00000373327 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
TRAF3IP1-201ENST00000373327 PAPPA-AS1Q5QFB9 102 aa13.37□□□□□ -0.27
TRAF3IP1-201ENST00000373327 P0DMU3 169 aa13.37□□□□□ -0.27
TRAF3IP1-201ENST00000373327 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
TRAF3IP1-201ENST00000373327 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
TRAF3IP1-201ENST00000373327 MYMXA0A1B0GTQ4 84 aa13.36□□□□□ -0.27
TRAF3IP1-201ENST00000373327 A0A1W2PPM0 123 aa13.36□□□□□ -0.27
TRAF3IP1-201ENST00000373327 BOD1L2Q8IYS8 172 aa13.36□□□□□ -0.27
TRAF3IP1-201ENST00000373327 ZFAND2AQ8N6M9 145 aa13.36□□□□□ -0.27
TRAF3IP1-201ENST00000373327 HTN3P15516 51 aa13.36□□□□□ -0.27
TRAF3IP1-201ENST00000373327 SAMD13Q5VXD3 122 aa13.36□□□□□ -0.27
TRAF3IP1-201ENST00000373327 IGHG4P01861 327 aa13.36□□□□□ -0.27
TRAF3IP1-201ENST00000373327 PMVKQ15126 192 aa13.36□□□□□ -0.27
TRAF3IP1-201ENST00000373327 MRPL53Q96EL3 112 aaKnown RBP13.35□□□□□ -0.27
TRAF3IP1-201ENST00000373327 FLNAP21333 2647 aaKnown RBP13.35□□□□□ -0.27
TRAF3IP1-201ENST00000373327 GATA3P23771 443 aa13.35□□□□□ -0.27
TRAF3IP1-201ENST00000373327 CEMP1Q6PRD7 247 aaPredicted RBP13.35□□□□□ -0.27
TRAF3IP1-201ENST00000373327 CEND1Q8N111 149 aa13.35□□□□□ -0.27
TRAF3IP1-201ENST00000373327 RASL10AQ92737 203 aa13.35□□□□□ -0.27
TRAF3IP1-201ENST00000373327 C11orf68Q9H3H3 251 aaKnown RBP13.35□□□□□ -0.27
TRAF3IP1-201ENST00000373327 OR5A1Q8NGJ0 315 aa13.35□□□□□ -0.27
TRAF3IP1-201ENST00000373327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.34□□□□□ -0.27
TRAF3IP1-201ENST00000373327 IGKV2-29A2NJV5 120 aaPredicted RBP13.34□□□□□ -0.27
TRAF3IP1-201ENST00000373327 LINC01619G3V211 115 aa13.34□□□□□ -0.27
TRAF3IP1-201ENST00000373327 C18orf65Q6ZTR6 163 aa13.34□□□□□ -0.27
TRAF3IP1-201ENST00000373327 A0A096LNJ9 63 aa13.33□□□□□ -0.28
TRAF3IP1-201ENST00000373327 SH2D6Q7Z4S9 175 aa13.33□□□□□ -0.28
TRAF3IP1-201ENST00000373327 ZNF415Q09FC8 603 aa13.33□□□□□ -0.28
TRAF3IP1-201ENST00000373327 ZFP2Q6ZN57 461 aa13.33□□□□□ -0.28
TRAF3IP1-201ENST00000373327 TRPT1Q86TN4 253 aaKnown RBP13.33□□□□□ -0.28
TRAF3IP1-201ENST00000373327 MAPKAPK5-AS1Q8N8E1 139 aa13.33□□□□□ -0.28
TRAF3IP1-201ENST00000373327 C12orf74Q32Q52 190 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 TMEM61Q8N0U2 210 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 C20orf78Q9BR46 151 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 GAGE12JA6NER3 117 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 K7EP34 96 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 LGALS1P09382 135 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms