RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 OR13C6PQ8NH95 151 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 METTL26Q96S19 204 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 DEFB127Q9H1M4 99 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 RELNP78509 3460 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 IGHV3-72A0A0B4J1Y9 119 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 TMEM30BQ3MIR4 351 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 BEX4Q9NWD9 120 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-201ENST00000373019 ITPR1Q14643 2758 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 A0A0G2JNJ9 132 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 F5H768 121 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 K7EIM0 57 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 HERVK_113P61574 105 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 CITED2Q99967 270 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-201ENST00000373019 Q9UFV3 132 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 FLNCQ14315 2725 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 C4orf26Q17RF5 130 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 MUSTN1Q8IVN3 82 aa7.26□□□□□ -1.25
SF3A3-201ENST00000373019 USP9XQ93008 2570 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-201ENST00000373019 CRYGAP11844 174 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 CSPG4Q6UVK1 2322 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 IGHV1-18A0A0C4DH31 117 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 SUMO2P61956 95 aaKnown RBP7.25□□□□□ -1.25
SF3A3-201ENST00000373019 Q6ZT83 130 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 DYNAPQ8N1N2 210 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 KIR2DL5BQ8NHK3 375 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 SMAD5-AS1Q9Y6J3 95 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 SPRY3O43610 288 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 COX7CP15954 63 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 MTORP42345 2549 aa7.25□□□□□ -1.25
SF3A3-201ENST00000373019 IGHV4-4A0A075B6R2 117 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 H3BT86 120 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 OVOL1O14753 267 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 IGLV1-44P01699 117 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 TMEM170BQ5T4T1 132 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 RPL39LQ96EH5 51 aaKnown RBP7.24□□□□□ -1.25
SF3A3-201ENST00000373019 SPRR3Q9UBC9 169 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 PRAC2D3DTV9 90 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 Q5XG85 94 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 DPH3Q96FX2 82 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 J3QQQ9 107 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 ENSAO43768 121 aaKnown RBP7.24□□□□□ -1.25
SF3A3-201ENST00000373019 MFAP4P55083 255 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 Q1RN00 199 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 GFRALQ6UXV0 394 aa7.24□□□□□ -1.25
SF3A3-201ENST00000373019 GAGE2AQ6NT46 116 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 PLCE1Q9P212 2302 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 MALRD1Q5VYJ5 2156 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 TMEM200BQ69YZ2 307 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 IGFL3Q6UXB1 125 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 SDIM1Q6ZPB5 146 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 EEF1AKMT3Q96AZ1 226 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 RNF7Q9UBF6 113 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 S4R3C0 116 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 TLN2Q9Y4G6 2542 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 USP9YO00507 2555 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-201ENST00000373019 SPRY2O43597 315 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 MYO9AB2RTY4 2548 aa7.23□□□□□ -1.25
SF3A3-201ENST00000373019 IGIPA6NJ69 53 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 GATA4P43694 442 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 TRAV41A0A0B4J266 112 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 hADV29S1A0JD25 119 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 COL27A1Q8IZC6 1860 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-201ENST00000373019 UBE2E1P51965 193 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 LINC00311Q8N616 119 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 SLC50A1Q9BRV3 221 aa7.22□□□□□ -1.25
SF3A3-201ENST00000373019 GCN1Q92616 2671 aaKnown RBP7.21□□□□□ -1.25
SF3A3-201ENST00000373019 SETXQ7Z333 2677 aaKnown RBP7.21□□□□□ -1.26
SF3A3-201ENST00000373019 ATP5G1P05496 136 aa7.21□□□□□ -1.26
SF3A3-201ENST00000373019 SPANXN1Q5VSR9 72 aa7.21□□□□□ -1.26
SF3A3-201ENST00000373019 HRCT1Q6UXD1 115 aa7.21□□□□□ -1.26
SF3A3-201ENST00000373019 ICOSQ9Y6W8 199 aa7.21□□□□□ -1.26
SF3A3-201ENST00000373019 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-201ENST00000373019 HIST1H4AP62805 103 aaKnown RBP7.21□□□□□ -1.26
SF3A3-201ENST00000373019 PAPPA-AS1Q5QFB9 102 aa7.21□□□□□ -1.26
SF3A3-201ENST00000373019 HIST2H2BCQ6DN03 193 aa7.21□□□□□ -1.26
SF3A3-201ENST00000373019 Q6ZSV7 163 aa7.21□□□□□ -1.26
SF3A3-201ENST00000373019 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-201ENST00000373019 SPANXDQ9BXN6 97 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 TRGV5A0A0B4J1U4 118 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 LST1O00453 97 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 IGFL2Q6UWQ7 119 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 LINC00643Q86TS7 51 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 SPANXCQ9NY87 97 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 C8orf31Q8N9H6 132 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 DCANP1Q8TF63 244 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 DEFB104AQ8WTQ1 72 aa7.2□□□□□ -1.26
SF3A3-201ENST00000373019 ACYP1P07311 99 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
SF3A3-201ENST00000373019 GNLYP22749 145 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 GPHB5Q86YW7 130 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 RNF182Q8N6D2 247 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 AGPAT4-IT1Q9H0P7 198 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 RPL39P62891 51 aaKnown RBP7.19□□□□□ -1.26
SF3A3-201ENST00000373019 ZNF876PQ49A33 203 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 MDS2Q8NDY4 140 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 TP53TG1Q9Y2A0 90 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms