RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.34
VEGFA-205ENST00000372067 C11orf44Q8N8P7 122 aa12.96□□□□□ -0.34
VEGFA-205ENST00000372067 GAS8-AS1O95177 125 aa12.95□□□□□ -0.34
VEGFA-205ENST00000372067 TNFRSF6BO95407 300 aa12.95□□□□□ -0.34
VEGFA-205ENST00000372067 PTH2Q96A98 100 aa12.95□□□□□ -0.34
VEGFA-205ENST00000372067 CARD19Q96LW7 228 aa12.95□□□□□ -0.34
VEGFA-205ENST00000372067 IGLC6P0CF74 106 aa12.95□□□□□ -0.34
VEGFA-205ENST00000372067 GAGE12JA6NER3 117 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 GAGE7O76087 117 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 GAGE12FP0CL80 117 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 GAGE12GP0CL81 117 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 GAGE12IP0CL82 117 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 GAGE4Q13068 117 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 C14orf178Q8N769 122 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-205ENST00000372067 IFI27L1Q96BM0 104 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 AGRNO00468 2067 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 HIST2H2BCQ6DN03 193 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 HIST2H2BDQ6DRA6 164 aa12.94□□□□□ -0.34
VEGFA-205ENST00000372067 H3BUA1 57 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 ZFAND6Q6FIF0 208 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 FAM159AQ6UWV7 190 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 SPXQ9BT56 116 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 TRAV12-3A0A0B4J271 114 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 ZNF493Q6ZR52 646 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 GNRH2O43555 120 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 PRR9Q5T870 116 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 C9orf47Q6ZRZ4 202 aa12.93□□□□□ -0.34
VEGFA-205ENST00000372067 DEFB136Q30KP8 78 aa12.92□□□□□ -0.34
VEGFA-205ENST00000372067 DUX3Q96PT4 197 aa12.92□□□□□ -0.34
VEGFA-205ENST00000372067 U3KQE9 123 aa12.92□□□□□ -0.34
VEGFA-205ENST00000372067 ACANP16112 2415 aa12.92□□□□□ -0.34
VEGFA-205ENST00000372067 NDUFV3P56181 108 aaKnown RBP12.92□□□□□ -0.34
VEGFA-205ENST00000372067 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
VEGFA-205ENST00000372067 MRPL53Q96EL3 112 aaKnown RBP12.92□□□□□ -0.34
VEGFA-205ENST00000372067 CD7P09564 240 aa12.91□□□□□ -0.34
VEGFA-205ENST00000372067 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
VEGFA-205ENST00000372067 CHAC1Q9BUX1 264 aa12.91□□□□□ -0.34
VEGFA-205ENST00000372067 CFAP126Q5VTH2 177 aa12.91□□□□□ -0.34
VEGFA-205ENST00000372067 TEX29Q8N6K0 151 aa12.91□□□□□ -0.34
VEGFA-205ENST00000372067 CELSR1Q9NYQ6 3014 aa12.91□□□□□ -0.34
VEGFA-205ENST00000372067 TRAV12-2A0A075B6T6 113 aa12.91□□□□□ -0.34
VEGFA-205ENST00000372067 C3orf56Q8N813 242 aa12.91□□□□□ -0.34
VEGFA-205ENST00000372067 CSDC2Q9Y534 153 aaKnown RBP12.91□□□□□ -0.34
VEGFA-205ENST00000372067 DEFB113Q30KQ7 82 aa12.9□□□□□ -0.34
VEGFA-205ENST00000372067 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
VEGFA-205ENST00000372067 FOXC2Q99958 501 aa12.9□□□□□ -0.34
VEGFA-205ENST00000372067 MTORP42345 2549 aa12.9□□□□□ -0.34
VEGFA-205ENST00000372067 MYOZ3Q8TDC0 251 aa12.89□□□□□ -0.35
VEGFA-205ENST00000372067 NXT2Q9NPJ8 142 aaKnown RBP12.89□□□□□ -0.35
VEGFA-205ENST00000372067 A0A1W2PRX2 142 aa12.89□□□□□ -0.35
VEGFA-205ENST00000372067 J3QLI3 93 aa12.89□□□□□ -0.35
VEGFA-205ENST00000372067 RHODO00212 210 aa12.88□□□□□ -0.35
VEGFA-205ENST00000372067 CEND1Q8N111 149 aa12.88□□□□□ -0.35
VEGFA-205ENST00000372067 DKK2Q9UBU2 259 aa12.88□□□□□ -0.35
VEGFA-205ENST00000372067 IGHV4-31P0DP07 118 aa12.88□□□□□ -0.35
VEGFA-205ENST00000372067 CRLF1O75462 422 aa12.88□□□□□ -0.35
VEGFA-205ENST00000372067 C19orf54Q5BKX5 351 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 RNF185Q96GF1 192 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 IGLV1-40P01703 118 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-205ENST00000372067 C12orf74Q32Q52 190 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 TMEM160Q9NX00 188 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 IGHV4OR15-8A0A075B7B6 117 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 A0A087WW49 117 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 DYNLRB2Q8TF09 96 aa12.87□□□□□ -0.35
VEGFA-205ENST00000372067 TRBV25-1A0A075B6N4 114 aa12.86□□□□□ -0.35
VEGFA-205ENST00000372067 SPINK13Q1W4C9 94 aa12.86□□□□□ -0.35
VEGFA-205ENST00000372067 ZANQ9Y493 2812 aa12.86□□□□□ -0.35
VEGFA-205ENST00000372067 A0A087WWL8 130 aa12.86□□□□□ -0.35
VEGFA-205ENST00000372067 TRAV4A0A0B4J268 109 aa12.86□□□□□ -0.35
VEGFA-205ENST00000372067 GPHB5Q86YW7 130 aa12.86□□□□□ -0.35
VEGFA-205ENST00000372067 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
VEGFA-205ENST00000372067 A4D1N5 150 aa12.85□□□□□ -0.35
VEGFA-205ENST00000372067 ZFAND2AQ8N6M9 145 aa12.85□□□□□ -0.35
VEGFA-205ENST00000372067 HOXD3P31249 432 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-205ENST00000372067 KLK9Q9UKQ9 250 aa12.85□□□□□ -0.35
VEGFA-205ENST00000372067 SLURP1P55000 103 aa12.84□□□□□ -0.35
VEGFA-205ENST00000372067 COX8CQ7Z4L0 72 aa12.84□□□□□ -0.35
VEGFA-205ENST00000372067 PSMB8P28062 276 aa12.84□□□□□ -0.35
VEGFA-205ENST00000372067 HIGD1BQ9P298 99 aa12.84□□□□□ -0.35
VEGFA-205ENST00000372067 RRN3P1Q2M238 152 aa12.84□□□□□ -0.35
VEGFA-205ENST00000372067 FCER1GP30273 86 aa12.83□□□□□ -0.36
VEGFA-205ENST00000372067 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.367e-8■■□□□ 13.8
VEGFA-205ENST00000372067 DPH3P1Q9H4G8 78 aa12.83□□□□□ -0.36
VEGFA-205ENST00000372067 LAGE3Q14657 143 aa12.83□□□□□ -0.36
VEGFA-205ENST00000372067 U3KQK5 164 aa12.83□□□□□ -0.36
VEGFA-205ENST00000372067 SRSF2Q01130 221 aaKnown RBP12.83□□□□□ -0.36
VEGFA-205ENST00000372067 C5orf47Q569G3 176 aa12.83□□□□□ -0.36
VEGFA-205ENST00000372067 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-205ENST00000372067 LENEPQ9Y5L5 61 aa12.83□□□□□ -0.36
VEGFA-205ENST00000372067 GATD1Q8NB37 220 aa12.82□□□□□ -0.36
VEGFA-205ENST00000372067 RPL39LQ96EH5 51 aaKnown RBP12.82□□□□□ -0.36
VEGFA-205ENST00000372067 HHLA3Q9XRX5 114 aa12.82□□□□□ -0.36
VEGFA-205ENST00000372067 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
VEGFA-205ENST00000372067 ZNF56Q15929 161 aa12.82□□□□□ -0.36
VEGFA-205ENST00000372067 Q8N8P6 123 aa12.82□□□□□ -0.36
VEGFA-205ENST00000372067 C18orf65Q6ZTR6 163 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms