RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 ASCL5Q7RTU5 278 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 MBD3L2Q8NHZ7 208 aaPredicted RBP6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 BPESC1Q9GZL8 116 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 IGLV1-44P01699 117 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 NDUFA11Q86Y39 141 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 PRR25Q96S07 402 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 B9A039 149 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 IGF1P05019 195 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 DTX2Q86UW9 622 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 LOC107984640A0A0U1RRK4 108 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 LINC01619G3V211 115 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 MAST4O15021 2626 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 IGHV4-39P01824 125 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 DGAT2L7PQ6IED9 249 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 AMELXQ99217 191 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 CENPVL3A0A0U1RRI6 287 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 GAGE12JA6NER3 117 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 I3L2K1 104 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 ATP6V0E1O15342 81 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 GAGE7O76087 117 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 CRYGDP07320 174 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 RNASE1P07998 156 aaKnown RBP6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 GAGE12FP0CL80 117 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 GAGE12GP0CL81 117 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 GAGE12IP0CL82 117 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 GAGE4Q13068 117 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 DYNAPQ8N1N2 210 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 TEX29Q8N6K0 151 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 SMAD5-AS1Q9Y6J3 95 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 CFAP46Q8IYW2 2715 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 AKAP9Q99996 3911 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 CRYGBP07316 175 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 ATP5IP56385 69 aaPredicted RBP6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 OR10J6PQ8NGY7 276 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
SMARCA1-203ENST00000371123 NBEAL1Q6ZS30 2694 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 TMEM155Q4W5P6 130 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 TRAV2A0A0B4J234 112 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 TEX49A0A1B0GTD5 131 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 H3BRN7 92 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 SAA4P35542 130 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 COX8CQ7Z4L0 72 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 ZNF491Q8N8L2 437 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 KLK9Q9UKQ9 250 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 GNRH2O43555 120 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 IGHV3-53P01767 116 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 CHCHD5Q9BSY4 110 aa6.67□□□□□ -1.34
SMARCA1-203ENST00000371123 TEP1Q99973 2627 aaKnown RBP6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 IGHV3-16A0A0C4DH30 117 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 ZNF815PA8K554 130 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 TSHBP01222 138 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 JPT2Q9H910 190 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 MDFICQ9P1T7 246 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 F8W735 103 aaPredicted RBP6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 PRM2P04554 102 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 Q8N8P6 123 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 NEXN-AS1Q8NBZ9 246 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 SHANK2-AS3Q9BTD1 123 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 CYSTM1Q9H1C7 97 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 VCX2Q9H322 139 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 MGAM2Q2M2H8 2515 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 CEMP1Q6PRD7 247 aaPredicted RBP6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 CFHR4Q92496 578 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 RPL39LQ96EH5 51 aaKnown RBP6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 TEX15Q9BXT5 2789 aa6.66□□□□□ -1.34
SMARCA1-203ENST00000371123 SLC25A16P16260 332 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 Q8N1Y9 231 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 PRADC1Q9BSG0 188 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 IGHV3-38A0A0C4DH36 116 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 H3BUX3 64 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 K7EIM0 57 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 RS1O15537 224 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 IGHV3-30P01768 117 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 IGHV3-30-5P0DP03 117 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 CDSNQ15517 529 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 PSMG4Q5JS54 123 aa6.65□□□□□ -1.34
SMARCA1-203ENST00000371123 IGHV7-4-1A0A0J9YVY3 117 aa6.65□□□□□ -1.35
SMARCA1-203ENST00000371123 A0A0J9YY99 117 aa6.65□□□□□ -1.35
SMARCA1-203ENST00000371123 UTP20O75691 2785 aaKnown RBP6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 BAALCQ8WXS3 180 aa6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 MSRB2Q9Y3D2 182 aa6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 IGLV4-69A0A075B6H9 119 aa6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 C11orf68Q9H3H3 251 aaKnown RBP6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 KLK5Q9Y337 293 aaPredicted RBP6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 CEACAM4O75871 244 aa6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 ATP5LO75964 103 aa6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 TRBV12-3P01733 135 aa6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 IFITM1P13164 125 aa6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 OR11H6Q8NGC7 330 aa6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 OPRPNQ99935 248 aaPredicted RBP6.64□□□□□ -1.35
SMARCA1-203ENST00000371123 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 TOMM7Q9P0U1 55 aa6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 LINC00694P0DN24 101 aa6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 BLCAPP62952 87 aa6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 MEIG1Q5JSS6 88 aa6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 ITLN2Q8WWU7 325 aaPredicted RBP6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 CSDC2Q9Y534 153 aaKnown RBP6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 F8VRH5 84 aa6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 UBE2E2Q96LR5 201 aa6.63□□□□□ -1.35
SMARCA1-203ENST00000371123 SPINK13Q1W4C9 94 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms