RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
DEPDC1-201ENST00000370966 H3BMG7 143 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 SPRY2O43597 315 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 SLURP1P55000 103 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 MLST8Q9BVC4 326 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 SORL1Q92673 2214 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 UBE2DNLQ8IWF7 75 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 TRAV13-2A0A0B4J235 113 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 TRAV12-1A0A0B4J245 112 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 K7ERJ3 54 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 C1orf229Q6ZS94 237 aaPredicted RBP9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 WDR87Q6ZQQ6 2873 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 C2orf70A6NJV1 201 aa9.12□□□□□ -0.95
DEPDC1-201ENST00000370966 NOP10Q9NPE3 64 aaKnown RBP9.11□□□□□ -0.95
DEPDC1-201ENST00000370966 HIGD1BQ9P298 99 aa9.11□□□□□ -0.95
DEPDC1-201ENST00000370966 CFC1BP0CG36 223 aa9.11□□□□□ -0.95
DEPDC1-201ENST00000370966 CFC1P0CG37 223 aa9.11□□□□□ -0.95
DEPDC1-201ENST00000370966 GAGE2AQ6NT46 116 aa9.11□□□□□ -0.95
DEPDC1-201ENST00000370966 A6NDX4 124 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 NUP210LQ5VU65 1888 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 SOCS3O14543 225 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 SPATA12Q7Z6I5 190 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 IFITM1P13164 125 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 AMTNQ6UX39 209 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 IGHV4OR15-8A0A075B7B6 117 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 A0A087WW49 117 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 TRAV25A0A0B4J276 109 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 GAGE12HA6NDE8 117 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 Q8N1Y9 231 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 TIMM17AQ99595 171 aa9.1□□□□□ -0.95
DEPDC1-201ENST00000370966 DSCAMO60469 2012 aa9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 TNFRSF13BO14836 293 aaPredicted RBP9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 CRYGBP07316 175 aa9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 MBD6Q96DN6 1003 aa9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 CEP192Q8TEP8 1941 aa9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 HERV-K104P63124 156 aa9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 EBI3Q14213 229 aa9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 APRG1Q8IVJ8 170 aa9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 IGKV2-29A2NJV5 120 aaPredicted RBP9.09□□□□□ -0.95
DEPDC1-201ENST00000370966 UNQ9165/PRO28630Q6UXU0 137 aa9.09□□□□□ -0.96
DEPDC1-201ENST00000370966 A0A0J9YXV3 536 aa9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 ANGP03950 147 aaKnown RBP9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 PSCAO43653 123 aa9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 HIVEP3Q5T1R4 2406 aa9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 LINC00322Q6ZN03 302 aaPredicted RBP9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 SLC25A29Q8N8R3 303 aa9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 CCDC140Q96MF4 163 aa9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 SPANXDQ9BXN6 97 aa9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 Q9H8V8 135 aa9.08□□□□□ -0.96
DEPDC1-201ENST00000370966 NXPH4O95158 308 aa9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 DAZ4Q86SG3 579 aaKnown RBP9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 TOMM6Q96B49 74 aa9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 C16orf74Q96GX8 76 aa9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 DAZ3Q9NR90 486 aaKnown RBP9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 IGF1P05019 195 aa9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 A0A0J9YX75 114 aa9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 F8WEM9 126 aa9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 IGLL5B9A064 214 aa9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 ODF1Q14990 250 aa9.07□□□□□ -0.96
DEPDC1-201ENST00000370966 E9PLD3 99 aa9.06□□□□□ -0.96
DEPDC1-201ENST00000370966 LY6LH3BQJ8 138 aa9.06□□□□□ -0.96
DEPDC1-201ENST00000370966 CARD19Q96LW7 228 aa9.06□□□□□ -0.96
DEPDC1-201ENST00000370966 NRGNQ92686 78 aa9.06□□□□□ -0.96
DEPDC1-201ENST00000370966 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
DEPDC1-201ENST00000370966 YPEL4Q96NS1 127 aa9.06□□□□□ -0.96
DEPDC1-201ENST00000370966 HCFC1P51610 2035 aa9.06□□□□□ -0.96
DEPDC1-201ENST00000370966 IGHG4P01861 327 aa9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 PLA2G5P39877 138 aa9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 ZNF80P51504 273 aaPredicted RBP9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 LOXL1Q08397 574 aaPredicted RBP9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 TRBV12-3P01733 135 aa9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 C9orf66Q5T8R8 295 aa9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 K7EQD1 137 aa9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 BAALCQ8WXS3 180 aa9.05□□□□□ -0.96
DEPDC1-201ENST00000370966 ABCA2Q9BZC7 2435 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 PRB1P04280 392 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 B5MCH6 92 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 RBX1P62877 108 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 TMEM61Q8N0U2 210 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 KIAA1549Q9HCM3 1950 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 TRBV7-3A0A075B6L6 115 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 FXYD2P54710 66 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 DEFB1P60022 68 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 GDF5OSQ5U4N7 250 aa9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 NTN5Q8WTR8 489 aaPredicted RBP9.04□□□□□ -0.96
DEPDC1-201ENST00000370966 Q71RC1 249 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1-201ENST00000370966 A4D1N5 150 aa9.03□□□□□ -0.96
DEPDC1-201ENST00000370966 LINC01548A6NM66 108 aa9.03□□□□□ -0.96
DEPDC1-201ENST00000370966 MYCNOSP40205 109 aa9.03□□□□□ -0.96
DEPDC1-201ENST00000370966 SMIM20Q8N5G0 67 aa9.03□□□□□ -0.96
DEPDC1-201ENST00000370966 ATP6V0E2Q8NHE4 81 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms