RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ACYP1P07311 99 aa12.3□□□□□ -0.44
CLSTN1-201ENST00000361311 C9orf47Q6ZRZ4 202 aa12.3□□□□□ -0.44
CLSTN1-201ENST00000361311 Q8N1Y9 231 aa12.3□□□□□ -0.44
CLSTN1-201ENST00000361311 RS1O15537 224 aa12.3□□□□□ -0.44
CLSTN1-201ENST00000361311 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
CLSTN1-201ENST00000361311 TRGV1A0A0A0MS02 117 aa12.29□□□□□ -0.44
CLSTN1-201ENST00000361311 PTPRSQ13332 1948 aa12.29□□□□□ -0.44
CLSTN1-201ENST00000361311 BPESC1Q9GZL8 116 aa12.29□□□□□ -0.44
CLSTN1-201ENST00000361311 PEMTQ9UBM1 199 aa12.29□□□□□ -0.44
CLSTN1-201ENST00000361311 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
CLSTN1-201ENST00000361311 SOCS3O14543 225 aa12.29□□□□□ -0.44
CLSTN1-201ENST00000361311 CFAP161Q6P656 301 aa12.29□□□□□ -0.44
CLSTN1-201ENST00000361311 STHQ8IWL8 128 aa12.29□□□□□ -0.44
CLSTN1-201ENST00000361311 IGHV3-53P01767 116 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 TMEM126AQ9H061 195 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 PRO3102Q9H379 93 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 BAALC-AS2P0C853 105 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 XGP55808 180 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 CFAP126Q5VTH2 177 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 RUSC1-AS1Q66K80 236 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 H3BT86 120 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 K7ENP7 123 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 RHODO00212 210 aa12.28□□□□□ -0.44
CLSTN1-201ENST00000361311 IGHV3-16A0A0C4DH30 117 aa12.27□□□□□ -0.44
CLSTN1-201ENST00000361311 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.44
CLSTN1-201ENST00000361311 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.44
CLSTN1-201ENST00000361311 IGFL2Q6UWQ7 119 aa12.27□□□□□ -0.45
CLSTN1-201ENST00000361311 TRGV4A0A0C4DH28 118 aa12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 SYNJ2BPP57105 145 aa12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 DEFB131AP59861 70 aa12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 LRP4O75096 1905 aa12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 IGHV7-4-1A0A0J9YVY3 117 aa12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 GNLYP22749 145 aa12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 PRR30Q53SZ7 412 aaPredicted RBP12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
CLSTN1-201ENST00000361311 CSPG4Q6UVK1 2322 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 A0A0J9YY99 117 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 GAS8-AS1O95177 125 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 DEFB1P60022 68 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 PIP4P1Q86T03 277 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 C6orf226Q5I0X4 101 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 CLEC2BQ92478 149 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 TEX49A0A1B0GTD5 131 aa12.25□□□□□ -0.45
CLSTN1-201ENST00000361311 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
CLSTN1-201ENST00000361311 Q9H8V8 135 aa12.24□□□□□ -0.45
CLSTN1-201ENST00000361311 ARHGAP32A7KAX9 2087 aa12.24□□□□□ -0.45
CLSTN1-201ENST00000361311 C16orf54Q6UWD8 224 aa12.24□□□□□ -0.45
CLSTN1-201ENST00000361311 SORL1Q92673 2214 aa12.24□□□□□ -0.45
CLSTN1-201ENST00000361311 A0A096LNJ9 63 aa12.23□□□□□ -0.45
CLSTN1-201ENST00000361311 Q8N9W7 124 aa12.23□□□□□ -0.45
CLSTN1-201ENST00000361311 SONP18583 2426 aaKnown RBP12.23□□□□□ -0.45
CLSTN1-201ENST00000361311 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
CLSTN1-201ENST00000361311 CRYGBP07316 175 aa12.23□□□□□ -0.45
CLSTN1-201ENST00000361311 LAMTOR3Q9UHA4 124 aa12.23□□□□□ -0.45
CLSTN1-201ENST00000361311 OPRPNQ99935 248 aaPredicted RBP12.22□□□□□ -0.45
CLSTN1-201ENST00000361311 AGRNO00468 2067 aa12.22□□□□□ -0.45
CLSTN1-201ENST00000361311 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.22□□□□□ -0.45
CLSTN1-201ENST00000361311 IGKV2-29A2NJV5 120 aaPredicted RBP12.22□□□□□ -0.45
CLSTN1-201ENST00000361311 HERVK_113P63121 156 aa12.22□□□□□ -0.45
CLSTN1-201ENST00000361311 DAND5Q8N907 189 aa12.22□□□□□ -0.45
CLSTN1-201ENST00000361311 ZNRF2Q8NHG8 242 aa12.22□□□□□ -0.45
CLSTN1-201ENST00000361311 UBE2E2Q96LR5 201 aa12.22□□□□□ -0.45
CLSTN1-201ENST00000361311 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.45
CLSTN1-201ENST00000361311 INSP01308 110 aa12.21□□□□□ -0.45
CLSTN1-201ENST00000361311 MED14OSP0DP75 135 aa12.21□□□□□ -0.45
CLSTN1-201ENST00000361311 JPT2Q9H910 190 aa12.21□□□□□ -0.45
CLSTN1-201ENST00000361311 HOXB4P17483 251 aaPredicted RBP12.21□□□□□ -0.45
CLSTN1-201ENST00000361311 PFN2P35080 140 aa12.21□□□□□ -0.45
CLSTN1-201ENST00000361311 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
CLSTN1-201ENST00000361311 A0A0B4J2C4 111 aa12.2□□□□□ -0.46
CLSTN1-201ENST00000361311 LGALS9O00182 355 aa12.2□□□□□ -0.46
CLSTN1-201ENST00000361311 MALP21145 153 aa12.2□□□□□ -0.46
CLSTN1-201ENST00000361311 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
CLSTN1-201ENST00000361311 TINCRA0A1B0GVN0 87 aa12.2□□□□□ -0.46
CLSTN1-201ENST00000361311 Q71RC1 249 aaPredicted RBP12.2□□□□□ -0.46
CLSTN1-201ENST00000361311 TNRC6BQ9UPQ9 1833 aaKnown RBP12.19□□□□□ -0.46
CLSTN1-201ENST00000361311 IGHV1-69P01742 117 aa12.19□□□□□ -0.46
CLSTN1-201ENST00000361311 GHRHP01286 108 aa12.19□□□□□ -0.46
CLSTN1-201ENST00000361311 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
CLSTN1-201ENST00000361311 CCDC168Q8NDH2 2452 aa12.19□□□□□ -0.46
CLSTN1-201ENST00000361311 J3KT08 172 aa12.18□□□□□ -0.46
CLSTN1-201ENST00000361311 NRACQ8N912 160 aa12.18□□□□□ -0.46
CLSTN1-201ENST00000361311 ATOX1O00244 68 aa12.18□□□□□ -0.46
CLSTN1-201ENST00000361311 IGHV3-33P01772 117 aa12.18□□□□□ -0.46
CLSTN1-201ENST00000361311 DSCAMO60469 2012 aa12.18□□□□□ -0.46
CLSTN1-201ENST00000361311 LINC01619G3V211 115 aa12.18□□□□□ -0.46
CLSTN1-201ENST00000361311 MRPL23Q16540 153 aaKnown RBP12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 C22orf34Q6ZV56 151 aa12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 C20orf203Q8NBC4 194 aa12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 UBL5Q9BZL1 73 aa12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 A0A0C4DFX4 3053 aa12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 TET2Q6N021 2002 aaPredicted RBP12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 A0A1W2PRX2 142 aa12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 SMAD5-AS1Q9Y6J3 95 aa12.17□□□□□ -0.46
CLSTN1-201ENST00000361311 CEP295Q9C0D2 2601 aa12.16□□□□□ -0.46
CLSTN1-201ENST00000361311 PIEZO2Q9H5I5 2752 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms