RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 C18orf15Q96N68 181 aa11.04□□□□□ -0.64
GABPB1-202ENST00000359031 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
GABPB1-202ENST00000359031 ZANQ9Y493 2812 aa11.04□□□□□ -0.64
GABPB1-202ENST00000359031 TRGV11A0A075B6L2 103 aa11.03□□□□□ -0.64
GABPB1-202ENST00000359031 COX8AP10176 69 aa11.03□□□□□ -0.64
GABPB1-202ENST00000359031 RPL32P62910 135 aaKnown RBP11.03□□□□□ -0.64
GABPB1-202ENST00000359031 TMEM61Q8N0U2 210 aa11.03□□□□□ -0.64
GABPB1-202ENST00000359031 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
GABPB1-202ENST00000359031 ZMAT5Q9UDW3 170 aaKnown RBP11.03□□□□□ -0.64
GABPB1-202ENST00000359031 MUC4Q99102 2169 aa11.02□□□□□ -0.64
GABPB1-202ENST00000359031 TCAPO15273 167 aa11.02□□□□□ -0.64
GABPB1-202ENST00000359031 RNASE1P07998 156 aaKnown RBP11.02□□□□□ -0.64
GABPB1-202ENST00000359031 LINC00315P59091 139 aa11.02□□□□□ -0.64
GABPB1-202ENST00000359031 DEFB131AP59861 70 aa11.02□□□□□ -0.64
GABPB1-202ENST00000359031 RPL39LQ96EH5 51 aaKnown RBP11.02□□□□□ -0.64
GABPB1-202ENST00000359031 NUDT3O95989 172 aa11.02□□□□□ -0.65
GABPB1-202ENST00000359031 FHL3Q13643 280 aa11.02□□□□□ -0.65
GABPB1-202ENST00000359031 ODF1Q14990 250 aa11.02□□□□□ -0.65
GABPB1-202ENST00000359031 Q8N1Y9 231 aa11.02□□□□□ -0.65
GABPB1-202ENST00000359031 C16orf95Q9H693 158 aa11.02□□□□□ -0.65
GABPB1-202ENST00000359031 KNCNA6PVL3 124 aa11.01□□□□□ -0.65
GABPB1-202ENST00000359031 H3BMM0 161 aa11.01□□□□□ -0.65
GABPB1-202ENST00000359031 PRSS1P07477 247 aa11.01□□□□□ -0.65
GABPB1-202ENST00000359031 DEFB114Q30KQ6 69 aa11.01□□□□□ -0.65
GABPB1-202ENST00000359031 ANKRD39Q53RE8 183 aa11.01□□□□□ -0.65
GABPB1-202ENST00000359031 LINC00469Q8N7U9 141 aa11.01□□□□□ -0.65
GABPB1-202ENST00000359031 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-202ENST00000359031 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
GABPB1-202ENST00000359031 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
GABPB1-202ENST00000359031 RAX2Q96IS3 184 aa11□□□□□ -0.65
GABPB1-202ENST00000359031 MAP6D1Q9H9H5 199 aa11□□□□□ -0.65
GABPB1-202ENST00000359031 MDFICQ9P1T7 246 aa11□□□□□ -0.65
GABPB1-202ENST00000359031 DKK2Q9UBU2 259 aa11□□□□□ -0.65
GABPB1-202ENST00000359031 MXRA5Q9NR99 2828 aa11□□□□□ -0.65
GABPB1-202ENST00000359031 HINT1P49773 126 aaPredicted RBP10.99□□□□□ -0.65
GABPB1-202ENST00000359031 SUMO4Q6EEV6 95 aa10.99□□□□□ -0.65
GABPB1-202ENST00000359031 TMEM160Q9NX00 188 aa10.99□□□□□ -0.65
GABPB1-202ENST00000359031 STPG4Q8N801 248 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 TOMM6Q96B49 74 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 TP73-AS1Q9UF72 201 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.98□□□□□ -0.65
GABPB1-202ENST00000359031 DPM2O94777 84 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 IGKCP01834 107 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 CD28P10747 220 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 FGF6P10767 208 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 G0S2P27469 103 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 CSTL1Q9H114 145 aa10.98□□□□□ -0.65
GABPB1-202ENST00000359031 TSSC4Q9Y5U2 329 aaPredicted RBP10.98□□□□□ -0.65
GABPB1-202ENST00000359031 A0A087WWL8 130 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 TRAV12-1A0A0B4J245 112 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 TRBV6-5A0A0K0K1A5 114 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 RBMY1BA6NDE4 496 aaKnown RBP10.97□□□□□ -0.65
GABPB1-202ENST00000359031 RBMY1EA6NEQ0 496 aaKnown RBP10.97□□□□□ -0.65
GABPB1-202ENST00000359031 CBY3A6NI87 242 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 CCL24O00175 119 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 DLEU1O43261 78 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 RBMY1DP0C7P1 496 aaKnown RBP10.97□□□□□ -0.65
GABPB1-202ENST00000359031 CD300EQ496F6 205 aaPredicted RBP10.97□□□□□ -0.65
GABPB1-202ENST00000359031 C12orf54Q6X4T0 127 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 ZNF418Q8TF45 676 aaPredicted RBP10.97□□□□□ -0.65
GABPB1-202ENST00000359031 CLUHP3Q96NS8 147 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 JPT2Q9H910 190 aa10.97□□□□□ -0.65
GABPB1-202ENST00000359031 A0A087WX48 190 aa10.96□□□□□ -0.65
GABPB1-202ENST00000359031 RBMY1A1P0DJD3 496 aaKnown RBP10.96□□□□□ -0.65
GABPB1-202ENST00000359031 RBMY1CP0DJD4 496 aa10.96□□□□□ -0.65
GABPB1-202ENST00000359031 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.65
GABPB1-202ENST00000359031 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
GABPB1-202ENST00000359031 LINC01006Q8NI28 216 aa10.96□□□□□ -0.65
GABPB1-202ENST00000359031 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.65
GABPB1-202ENST00000359031 AGRNO00468 2067 aa10.96□□□□□ -0.66
GABPB1-202ENST00000359031 NBEAL1Q6ZS30 2694 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 F5H697 171 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 HILS1P60008 231 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 C2orf91Q6ZV80 131 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 SCGB3A1Q96QR1 104 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 LINC00467Q9BRT7 94 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 SONP18583 2426 aaKnown RBP10.95□□□□□ -0.66
GABPB1-202ENST00000359031 A0A1W2PRX2 142 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 VCYO14598 125 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 CRYGDP07320 174 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
GABPB1-202ENST00000359031 ZNF56Q15929 161 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 C2orf66Q6UXQ4 117 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 JMJD8Q96S16 334 aa10.95□□□□□ -0.66
GABPB1-202ENST00000359031 CITED2Q99967 270 aaPredicted RBP10.95□□□□□ -0.66
GABPB1-202ENST00000359031 SIVA1O15304 175 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 NDUFA7O95182 113 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 PLNP26678 52 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 ZNF415Q09FC8 603 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 ZNF124Q15973 351 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 ZNF876PQ49A33 203 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 MPV17L2Q567V2 206 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 PIK3CD-AS1Q5SR53 167 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 BVES-AS1Q5T3Y7 98 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 FAM74A4Q5TZK3 123 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 HIST2H2BDQ6DRA6 164 aa10.94□□□□□ -0.66
GABPB1-202ENST00000359031 INSP01308 110 aa10.93□□□□□ -0.66
GABPB1-202ENST00000359031 KRTAP24-1Q3LI83 254 aa10.93□□□□□ -0.66
GABPB1-202ENST00000359031 TRPT1Q86TN4 253 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms