RNA–Protein interactions for RNA: ENST00000357880.7

LINC01554-201, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best)

Gene LINC01554, Length 804 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-201ENST00000357880 PDE6DO43924 150 aa11.92□□□□□ -0.5
LINC01554-201ENST00000357880 IGLV2-8P01709 118 aa11.92□□□□□ -0.5
LINC01554-201ENST00000357880 CRYGDP07320 174 aa11.92□□□□□ -0.5
LINC01554-201ENST00000357880 ALKAL2Q6UX46 152 aa11.92□□□□□ -0.5
LINC01554-201ENST00000357880 GTSF1LQ9H1H1 148 aa11.92□□□□□ -0.5
LINC01554-201ENST00000357880 MED9Q9NWA0 146 aa11.92□□□□□ -0.5
LINC01554-201ENST00000357880 MUC21A0A0G2JKD1 596 aa11.91□□□□□ -0.5
LINC01554-201ENST00000357880 MUC21A0A140T8X8 626 aa11.91□□□□□ -0.5
LINC01554-201ENST00000357880 CXCL1P09341 107 aa11.91□□□□□ -0.5
LINC01554-201ENST00000357880 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
LINC01554-201ENST00000357880 NKX2-5P52952 324 aaPredicted RBP11.91□□□□□ -0.5
LINC01554-201ENST00000357880 OR10J3Q5JRS4 329 aa11.91□□□□□ -0.5
LINC01554-201ENST00000357880 OR10AG1Q8NH19 301 aa11.91□□□□□ -0.5
LINC01554-201ENST00000357880 VAX2Q9UIW0 290 aa11.91□□□□□ -0.5
LINC01554-201ENST00000357880 TRAV8-6A0A0B4J262 113 aa11.9□□□□□ -0.5
LINC01554-201ENST00000357880 IGHV3-38A0A0C4DH36 116 aa11.9□□□□□ -0.5
LINC01554-201ENST00000357880 GNG4P50150 75 aa11.9□□□□□ -0.5
LINC01554-201ENST00000357880 SSTP61278 116 aa11.9□□□□□ -0.5
LINC01554-201ENST00000357880 LELP1Q5T871 98 aa11.9□□□□□ -0.5
LINC01554-201ENST00000357880 SPATA12Q7Z6I5 190 aa11.9□□□□□ -0.5
LINC01554-201ENST00000357880 MSRB1Q9NZV6 116 aa11.9□□□□□ -0.5
LINC01554-201ENST00000357880 C16orf90A8MZG2 172 aa11.89□□□□□ -0.51
LINC01554-201ENST00000357880 K7EP13 123 aa11.89□□□□□ -0.51
LINC01554-201ENST00000357880 SNAI2O43623 268 aa11.89□□□□□ -0.51
LINC01554-201ENST00000357880 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
LINC01554-201ENST00000357880 SSBP4Q9BWG4 385 aaPredicted RBP11.89□□□□□ -0.51
LINC01554-201ENST00000357880 TRBV20OR9-2A0A075B6H5 130 aa11.88□□□□□ -0.51
LINC01554-201ENST00000357880 SPANXN1Q5VSR9 72 aa11.88□□□□□ -0.51
LINC01554-201ENST00000357880 NFE4Q86UQ8 179 aa11.88□□□□□ -0.51
LINC01554-201ENST00000357880 DAZAP1Q96EP5 407 aaKnown RBP11.88□□□□□ -0.51
LINC01554-201ENST00000357880 BOLA1Q9Y3E2 137 aa11.88□□□□□ -0.51
LINC01554-201ENST00000357880 IGHV3-30P01768 117 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 IGHV3-33P01772 117 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 OR5AL1P0C617 328 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 IGHV3-30-3P0DP02 117 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 IGHV3-30-5P0DP03 117 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 GZMBP10144 247 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 KRTAP10-2P60368 255 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 BLOC1S1P78537 153 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 C10orf126Q8N4M7 172 aa11.87□□□□□ -0.51
LINC01554-201ENST00000357880 C19orf71A6NCJ1 209 aa11.86□□□□□ -0.51
LINC01554-201ENST00000357880 TAGLN2P37802 199 aaKnown RBP11.86□□□□□ -0.51
LINC01554-201ENST00000357880 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
LINC01554-201ENST00000357880 SMIM12Q96EX1 92 aa11.86□□□□□ -0.51
LINC01554-201ENST00000357880 TPPP3Q9BW30 176 aa11.85□□□□□ -0.51
LINC01554-201ENST00000357880 RBFOX3A6NFN3 312 aa11.84□□□□□ -0.51
LINC01554-201ENST00000357880 ZNF56Q15929 161 aa11.84□□□□□ -0.51
LINC01554-201ENST00000357880 Q8N3U1 123 aa11.84□□□□□ -0.51
LINC01554-201ENST00000357880 IBA57-AS1B1ANH7 110 aa11.83□□□□□ -0.52
LINC01554-201ENST00000357880 P01737 135 aa11.83□□□□□ -0.52
LINC01554-201ENST00000357880 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
LINC01554-201ENST00000357880 RAB4BP61018 213 aa11.83□□□□□ -0.52
LINC01554-201ENST00000357880 FER1L6-AS1Q8NA97 138 aa11.83□□□□□ -0.52
LINC01554-201ENST00000357880 LYPD6BQ8NI32 183 aa11.83□□□□□ -0.52
LINC01554-201ENST00000357880 TRBV10-1A0A0K0K1A3 114 aa11.82□□□□□ -0.52
LINC01554-201ENST00000357880 IGLC6P0CF74 106 aa11.82□□□□□ -0.52
LINC01554-201ENST00000357880 FUSP35637 526 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC01554-201ENST00000357880 ERVFC1-1P60608 527 aa11.82□□□□□ -0.52
LINC01554-201ENST00000357880 RPL36AP83881 106 aaKnown RBP11.82□□□□□ -0.52
LINC01554-201ENST00000357880 RPL36ALQ969Q0 106 aaKnown RBP11.82□□□□□ -0.52
LINC01554-201ENST00000357880 Q9HAA7 133 aa11.82□□□□□ -0.52
LINC01554-201ENST00000357880 BIN3Q9NQY0 253 aa11.82□□□□□ -0.52
LINC01554-201ENST00000357880 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
LINC01554-201ENST00000357880 A0A087WWC5 75 aa11.81□□□□□ -0.52
LINC01554-201ENST00000357880 F5H697 171 aa11.81□□□□□ -0.52
LINC01554-201ENST00000357880 NUDT10Q8NFP7 164 aa11.81□□□□□ -0.52
LINC01554-201ENST00000357880 OCC1Q8TAD7 63 aa11.81□□□□□ -0.52
LINC01554-201ENST00000357880 NUDT11Q96G61 164 aa11.81□□□□□ -0.52
LINC01554-201ENST00000357880 A0A087WTM6 91 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 XKRY2A2RUG3 117 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 K7EN84 100 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 EREGO14944 169 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 SMIM17P0DL12 118 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 UBE2D3P61077 147 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 UBE2D2P62837 147 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 NEXN-AS1Q8NBZ9 246 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 AP1S3Q96PC3 154 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 LRP1BQ9NZR2 4599 aa11.8□□□□□ -0.52
LINC01554-201ENST00000357880 RYR1P21817 5038 aa11.79□□□□□ -0.52
LINC01554-201ENST00000357880 CEBPGP53567 150 aa11.79□□□□□ -0.52
LINC01554-201ENST00000357880 TOR2AQ5JU69 321 aa11.79□□□□□ -0.52
LINC01554-201ENST00000357880 LYZL1Q6UWQ5 148 aa11.79□□□□□ -0.52
LINC01554-201ENST00000357880 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
LINC01554-201ENST00000357880 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
LINC01554-201ENST00000357880 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
LINC01554-201ENST00000357880 PSCAO43653 123 aa11.78□□□□□ -0.52
LINC01554-201ENST00000357880 DAZ4Q86SG3 579 aaKnown RBP11.78□□□□□ -0.52
LINC01554-201ENST00000357880 DAZ3Q9NR90 486 aaKnown RBP11.78□□□□□ -0.52
LINC01554-201ENST00000357880 F2Z2F3 143 aa11.77□□□□□ -0.53
LINC01554-201ENST00000357880 CACNG7P62955 275 aa11.77□□□□□ -0.53
LINC01554-201ENST00000357880 EIF5A2Q9GZV4 153 aaKnown RBP11.77□□□□□ -0.53
LINC01554-201ENST00000357880 PGPEP1Q9NXJ5 209 aa11.77□□□□□ -0.53
LINC01554-201ENST00000357880 MGPP08493 103 aa11.76□□□□□ -0.53
LINC01554-201ENST00000357880 NIT1Q86X76 327 aa11.76□□□□□ -0.53
LINC01554-201ENST00000357880 RPP21Q9H633 154 aaKnown RBP11.76□□□□□ -0.53
LINC01554-201ENST00000357880 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
LINC01554-201ENST00000357880 CDK2AP2O75956 126 aa11.75□□□□□ -0.53
LINC01554-201ENST00000357880 NTF3P20783 257 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms