RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 LAMTOR2Q9Y2Q5 125 aa13.08□□□□□ -0.31
SMARCD3-202ENST00000356800 DNHD1Q96M86 4753 aa13.08□□□□□ -0.32
SMARCD3-202ENST00000356800 DEFB135Q30KP9 77 aa13.08□□□□□ -0.32
SMARCD3-202ENST00000356800 C14orf178Q8N769 122 aaPredicted RBP13.08□□□□□ -0.32
SMARCD3-202ENST00000356800 TMEM263Q8WUH6 116 aaKnown RBP13.08□□□□□ -0.32
SMARCD3-202ENST00000356800 RCHY1Q96PM5 261 aa13.08□□□□□ -0.32
SMARCD3-202ENST00000356800 KIF25-AS1Q9Y6Z4 181 aa13.08□□□□□ -0.32
SMARCD3-202ENST00000356800 PLAC8L1A1L4L8 177 aa13.07□□□□□ -0.32
SMARCD3-202ENST00000356800 ZNF876PQ49A33 203 aa13.07□□□□□ -0.32
SMARCD3-202ENST00000356800 POM121L12Q8N7R1 296 aa13.07□□□□□ -0.32
SMARCD3-202ENST00000356800 HIST1H2BLQ99880 126 aa13.07□□□□□ -0.32
SMARCD3-202ENST00000356800 JPT2Q9H910 190 aa13.07□□□□□ -0.32
SMARCD3-202ENST00000356800 X6R8D5 127 aa13.07□□□□□ -0.32
SMARCD3-202ENST00000356800 MRAP2Q96G30 205 aa13.06□□□□□ -0.32
SMARCD3-202ENST00000356800 SPXQ9BT56 116 aa13.06□□□□□ -0.32
SMARCD3-202ENST00000356800 M0R2P5 195 aa13.05□□□□□ -0.32
SMARCD3-202ENST00000356800 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
SMARCD3-202ENST00000356800 NACAE9PAV3 2078 aa13.05□□□□□ -0.32
SMARCD3-202ENST00000356800 SMKR1H3BMG3 65 aa13.05□□□□□ -0.32
SMARCD3-202ENST00000356800 SMIM17P0DL12 118 aa13.05□□□□□ -0.32
SMARCD3-202ENST00000356800 LINC00315P59091 139 aa13.05□□□□□ -0.32
SMARCD3-202ENST00000356800 TMEM18Q96B42 140 aa13.05□□□□□ -0.32
SMARCD3-202ENST00000356800 C16orf74Q96GX8 76 aa13.05□□□□□ -0.32
SMARCD3-202ENST00000356800 NCR2O95944 276 aa13.04□□□□□ -0.32
SMARCD3-202ENST00000356800 FABP4P15090 132 aa13.04□□□□□ -0.32
SMARCD3-202ENST00000356800 AKR1D1P51857 326 aa13.04□□□□□ -0.32
SMARCD3-202ENST00000356800 NIT1Q86X76 327 aa13.04□□□□□ -0.32
SMARCD3-202ENST00000356800 CHCHD1Q96BP2 118 aaKnown RBP13.04□□□□□ -0.32
SMARCD3-202ENST00000356800 URB1-AS1Q96HZ7 61 aa13.04□□□□□ -0.32
SMARCD3-202ENST00000356800 PACRGQ96M98 296 aaPredicted RBP13.04□□□□□ -0.32
SMARCD3-202ENST00000356800 NDUFAF3Q9BU61 184 aa13.04□□□□□ -0.32
SMARCD3-202ENST00000356800 K7EIL1 84 aa13.03□□□□□ -0.32
SMARCD3-202ENST00000356800 GAS8-AS1O95177 125 aa13.03□□□□□ -0.32
SMARCD3-202ENST00000356800 Q6ZWC4 215 aa13.03□□□□□ -0.32
SMARCD3-202ENST00000356800 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
SMARCD3-202ENST00000356800 NPYP01303 97 aa13.02□□□□□ -0.32
SMARCD3-202ENST00000356800 CRYGDP07320 174 aa13.02□□□□□ -0.32
SMARCD3-202ENST00000356800 LINC00614P0C842 121 aa13.02□□□□□ -0.32
SMARCD3-202ENST00000356800 RNF183Q96D59 192 aa13.02□□□□□ -0.32
SMARCD3-202ENST00000356800 SAMD10Q9BYL1 202 aa13.02□□□□□ -0.32
SMARCD3-202ENST00000356800 TRAV26-2A0A0B4J265 109 aa13.02□□□□□ -0.33
SMARCD3-202ENST00000356800 TNFRSF6BO95407 300 aa13.02□□□□□ -0.33
SMARCD3-202ENST00000356800 DAZ2Q13117 558 aaKnown RBP13.02□□□□□ -0.33
SMARCD3-202ENST00000356800 NRACQ8N912 160 aa13.02□□□□□ -0.33
SMARCD3-202ENST00000356800 OR11H2Q8NH07 326 aa13.02□□□□□ -0.33
SMARCD3-202ENST00000356800 NOP10Q9NPE3 64 aaKnown RBP13.02□□□□□ -0.33
SMARCD3-202ENST00000356800 A0A087WWL8 130 aa13.01□□□□□ -0.33
SMARCD3-202ENST00000356800 SMIM9A6NGZ8 99 aa13.01□□□□□ -0.33
SMARCD3-202ENST00000356800 PRSS47A8MTI9 375 aa13.01□□□□□ -0.33
SMARCD3-202ENST00000356800 MGPP08493 103 aa13.01□□□□□ -0.33
SMARCD3-202ENST00000356800 RNASEKQ6P5S7 137 aaKnown RBP13.01□□□□□ -0.33
SMARCD3-202ENST00000356800 RASL10AQ92737 203 aa13.01□□□□□ -0.33
SMARCD3-202ENST00000356800 A8MWV9 139 aa13□□□□□ -0.33
SMARCD3-202ENST00000356800 GATA1P15976 413 aaPredicted RBP13□□□□□ -0.33
SMARCD3-202ENST00000356800 Q6ZTI0 123 aa13□□□□□ -0.33
SMARCD3-202ENST00000356800 PRSS3P2Q8NHM4 247 aa13□□□□□ -0.33
SMARCD3-202ENST00000356800 MAP1LC3AQ9H492 121 aa13□□□□□ -0.33
SMARCD3-202ENST00000356800 HSBP1O75506 76 aa12.99□□□□□ -0.33
SMARCD3-202ENST00000356800 PPP1R17O96001 155 aa12.99□□□□□ -0.33
SMARCD3-202ENST00000356800 OR10D4PQ8NGN7 298 aa12.99□□□□□ -0.33
SMARCD3-202ENST00000356800 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
SMARCD3-202ENST00000356800 TRGV1A0A0A0MS02 117 aa12.99□□□□□ -0.33
SMARCD3-202ENST00000356800 IFI27P40305 119 aaPredicted RBP12.99□□□□□ -0.33
SMARCD3-202ENST00000356800 AP5S1Q9NUS5 200 aa12.99□□□□□ -0.33
SMARCD3-202ENST00000356800 AMTP48728 403 aa12.98□□□□□ -0.33
SMARCD3-202ENST00000356800 EMP1P54849 157 aa12.98□□□□□ -0.33
SMARCD3-202ENST00000356800 LGALS9BQ3B8N2 356 aa12.98□□□□□ -0.33
SMARCD3-202ENST00000356800 UFSP1Q6NVU6 142 aa12.98□□□□□ -0.33
SMARCD3-202ENST00000356800 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
SMARCD3-202ENST00000356800 RETNQ9HD89 108 aa12.98□□□□□ -0.33
SMARCD3-202ENST00000356800 LOC389332A0A1B0GUA5 103 aa12.97□□□□□ -0.33
SMARCD3-202ENST00000356800 PMCHP20382 165 aa12.97□□□□□ -0.33
SMARCD3-202ENST00000356800 FAM74A4Q5TZK3 123 aa12.97□□□□□ -0.33
SMARCD3-202ENST00000356800 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
SMARCD3-202ENST00000356800 SUMO4Q6EEV6 95 aa12.97□□□□□ -0.33
SMARCD3-202ENST00000356800 Q8NAQ8 132 aa12.97□□□□□ -0.33
SMARCD3-202ENST00000356800 C20orf78Q9BR46 151 aa12.97□□□□□ -0.33
SMARCD3-202ENST00000356800 NXT2Q9NPJ8 142 aaKnown RBP12.97□□□□□ -0.33
SMARCD3-202ENST00000356800 IGHV4-28A0A0C4DH34 117 aa12.96□□□□□ -0.33
SMARCD3-202ENST00000356800 LINC01546A6NGU7 62 aa12.96□□□□□ -0.33
SMARCD3-202ENST00000356800 F5H697 171 aa12.96□□□□□ -0.34
SMARCD3-202ENST00000356800 RS1O15537 224 aa12.96□□□□□ -0.34
SMARCD3-202ENST00000356800 FAM19A2Q8N3H0 131 aa12.96□□□□□ -0.34
SMARCD3-202ENST00000356800 TP53TG1Q9Y2A0 90 aa12.96□□□□□ -0.34
SMARCD3-202ENST00000356800 DEFB4AO15263 64 aa12.95□□□□□ -0.34
SMARCD3-202ENST00000356800 MIFP14174 115 aa12.95□□□□□ -0.34
SMARCD3-202ENST00000356800 SBSPONQ8IVN8 264 aa12.95□□□□□ -0.34
SMARCD3-202ENST00000356800 EDA2RQ9HAV5 297 aa12.95□□□□□ -0.34
SMARCD3-202ENST00000356800 IGLV2-18A0A075B6J9 118 aa12.94□□□□□ -0.34
SMARCD3-202ENST00000356800 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
SMARCD3-202ENST00000356800 M0QY20 66 aa12.94□□□□□ -0.34
SMARCD3-202ENST00000356800 RHODO00212 210 aa12.94□□□□□ -0.34
SMARCD3-202ENST00000356800 SUMO2P61956 95 aaKnown RBP12.94□□□□□ -0.34
SMARCD3-202ENST00000356800 ZNF56Q15929 161 aa12.94□□□□□ -0.34
SMARCD3-202ENST00000356800 Q8N8P6 123 aa12.94□□□□□ -0.34
SMARCD3-202ENST00000356800 RPL39LQ96EH5 51 aaKnown RBP12.94□□□□□ -0.34
SMARCD3-202ENST00000356800 IGHV1-24A0A0C4DH33 117 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 GAGE12BA1L429 117 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 GAGE7O76087 117 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 GAGE12FP0CL80 117 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms