RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MRPL53Q96EL3 112 aaKnown RBP13.15□□□□□ -0.3
NPAS3-202ENST00000356141 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.3
NPAS3-202ENST00000356141 MUC4Q99102 2169 aa13.14□□□□□ -0.31
NPAS3-202ENST00000356141 CD7P09564 240 aa13.14□□□□□ -0.31
NPAS3-202ENST00000356141 Q6AWC8 147 aa13.14□□□□□ -0.31
NPAS3-202ENST00000356141 COX8CQ7Z4L0 72 aa13.14□□□□□ -0.31
NPAS3-202ENST00000356141 NUDT3O95989 172 aa13.14□□□□□ -0.31
NPAS3-202ENST00000356141 ORMDL3Q8N138 153 aa13.14□□□□□ -0.31
NPAS3-202ENST00000356141 RNF185Q96GF1 192 aa13.14□□□□□ -0.31
NPAS3-202ENST00000356141 C18orf15Q96N68 181 aa13.14□□□□□ -0.31
NPAS3-202ENST00000356141 TRAV25A0A0B4J276 109 aa13.13□□□□□ -0.31
NPAS3-202ENST00000356141 TRAV21A0A0B4J279 112 aa13.13□□□□□ -0.31
NPAS3-202ENST00000356141 K7EQG2 157 aa13.13□□□□□ -0.31
NPAS3-202ENST00000356141 CD300EQ496F6 205 aaPredicted RBP13.13□□□□□ -0.31
NPAS3-202ENST00000356141 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
NPAS3-202ENST00000356141 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
NPAS3-202ENST00000356141 LEPROTL1O95214 131 aa13.12□□□□□ -0.31
NPAS3-202ENST00000356141 Q8N2B8 174 aa13.12□□□□□ -0.31
NPAS3-202ENST00000356141 A0A087WWL8 130 aa13.12□□□□□ -0.31
NPAS3-202ENST00000356141 AP5S1Q9NUS5 200 aa13.12□□□□□ -0.31
NPAS3-202ENST00000356141 SS18L2Q9UHA2 77 aa13.12□□□□□ -0.31
NPAS3-202ENST00000356141 GAGE10A6NGK3 116 aa13.12□□□□□ -0.31
NPAS3-202ENST00000356141 FAM74A4Q5TZK3 123 aa13.11□□□□□ -0.31
NPAS3-202ENST00000356141 C4orf3Q8WVX3 66 aa13.11□□□□□ -0.31
NPAS3-202ENST00000356141 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
NPAS3-202ENST00000356141 A0A0J9YX75 114 aa13.11□□□□□ -0.31
NPAS3-202ENST00000356141 TMEM89A2RUT3 159 aa13.11□□□□□ -0.31
NPAS3-202ENST00000356141 FAM159AQ6UWV7 190 aa13.11□□□□□ -0.31
NPAS3-202ENST00000356141 NEGR1Q7Z3B1 354 aa13.11□□□□□ -0.31
NPAS3-202ENST00000356141 IGHV3OR16-12A0A075B7B8 117 aa13.1□□□□□ -0.31
NPAS3-202ENST00000356141 ASIPP42127 132 aa13.1□□□□□ -0.31
NPAS3-202ENST00000356141 CCL24O00175 119 aa13.1□□□□□ -0.31
NPAS3-202ENST00000356141 ZNF493Q6ZR52 646 aa13.1□□□□□ -0.31
NPAS3-202ENST00000356141 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
NPAS3-202ENST00000356141 TMEM191AQ9H0A3 160 aa13.09□□□□□ -0.31
NPAS3-202ENST00000356141 SCGB1A1P11684 91 aa13.08□□□□□ -0.31
NPAS3-202ENST00000356141 RNASE3P12724 160 aaKnown RBP13.08□□□□□ -0.31
NPAS3-202ENST00000356141 RNF152Q8N8N0 203 aa13.08□□□□□ -0.31
NPAS3-202ENST00000356141 RPL39LQ96EH5 51 aaKnown RBP13.08□□□□□ -0.31
NPAS3-202ENST00000356141 SIGMAR1Q99720 223 aa13.08□□□□□ -0.31
NPAS3-202ENST00000356141 IGLL1P15814 213 aa13.08□□□□□ -0.32
NPAS3-202ENST00000356141 ZNF418Q8TF45 676 aaPredicted RBP13.08□□□□□ -0.32
NPAS3-202ENST00000356141 IGHV3-73A0A0B4J1V6 119 aa13.08□□□□□ -0.32
NPAS3-202ENST00000356141 hDV102S1A0JD36 115 aa13.07□□□□□ -0.32
NPAS3-202ENST00000356141 OR4C46A6NHA9 309 aa13.07□□□□□ -0.32
NPAS3-202ENST00000356141 LGALS9O00182 355 aa13.07□□□□□ -0.32
NPAS3-202ENST00000356141 RBMY1A1P0DJD3 496 aaKnown RBP13.07□□□□□ -0.32
NPAS3-202ENST00000356141 RBMY1CP0DJD4 496 aa13.07□□□□□ -0.32
NPAS3-202ENST00000356141 RBMY1FQ15415 496 aaKnown RBP13.07□□□□□ -0.32
NPAS3-202ENST00000356141 DEFB125Q8N687 156 aa13.07□□□□□ -0.32
NPAS3-202ENST00000356141 BVES-AS1Q5T3Y7 98 aa13.06□□□□□ -0.32
NPAS3-202ENST00000356141 Q8N1Y9 231 aa13.06□□□□□ -0.32
NPAS3-202ENST00000356141 FAM19A4Q96LR4 140 aa13.06□□□□□ -0.32
NPAS3-202ENST00000356141 C7orf71A4D174 169 aa13.06□□□□□ -0.32
NPAS3-202ENST00000356141 RPL24P83731 157 aaKnown RBP13.06□□□□□ -0.32
NPAS3-202ENST00000356141 NAA38Q9BRA0 125 aaKnown RBP13.06□□□□□ -0.32
NPAS3-202ENST00000356141 PEMTQ9UBM1 199 aa13.06□□□□□ -0.32
NPAS3-202ENST00000356141 TSSC4Q9Y5U2 329 aaPredicted RBP13.06□□□□□ -0.32
NPAS3-202ENST00000356141 A0A096LNJ9 63 aa13.05□□□□□ -0.32
NPAS3-202ENST00000356141 RBMY1BA6NDE4 496 aaKnown RBP13.05□□□□□ -0.32
NPAS3-202ENST00000356141 RBMY1EA6NEQ0 496 aaKnown RBP13.05□□□□□ -0.32
NPAS3-202ENST00000356141 F5H697 171 aa13.05□□□□□ -0.32
NPAS3-202ENST00000356141 RBMY1DP0C7P1 496 aaKnown RBP13.05□□□□□ -0.32
NPAS3-202ENST00000356141 TMEM70Q9BUB7 260 aa13.05□□□□□ -0.32
NPAS3-202ENST00000356141 KLLNB2CW77 178 aa13.04□□□□□ -0.32
NPAS3-202ENST00000356141 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
NPAS3-202ENST00000356141 DEFB114Q30KQ6 69 aa13.04□□□□□ -0.32
NPAS3-202ENST00000356141 TRAV9-2A0A087WT02 112 aa13.04□□□□□ -0.32
NPAS3-202ENST00000356141 TMEM86BQ8N661 226 aa13.04□□□□□ -0.32
NPAS3-202ENST00000356141 CHCHD1Q96BP2 118 aaKnown RBP13.04□□□□□ -0.32
NPAS3-202ENST00000356141 XCL2Q9UBD3 114 aa13.04□□□□□ -0.32
NPAS3-202ENST00000356141 RNASE1P07998 156 aaKnown RBP13.03□□□□□ -0.32
NPAS3-202ENST00000356141 SYS1-DBNDD2H3BUS1 97 aa13.03□□□□□ -0.32
NPAS3-202ENST00000356141 LEPP41159 167 aa13.03□□□□□ -0.32
NPAS3-202ENST00000356141 KRTAP10-3P60369 221 aa13.03□□□□□ -0.32
NPAS3-202ENST00000356141 SPATA3Q8NHX4 192 aa13.03□□□□□ -0.32
NPAS3-202ENST00000356141 MAP6D1Q9H9H5 199 aa13.03□□□□□ -0.32
NPAS3-202ENST00000356141 OR2K2Q8NGT1 345 aa13.02□□□□□ -0.33
NPAS3-202ENST00000356141 AP1S3Q96PC3 154 aa13.02□□□□□ -0.33
NPAS3-202ENST00000356141 CNFNQ9BYD5 112 aa13.02□□□□□ -0.33
NPAS3-202ENST00000356141 MAP1LC3AQ9H492 121 aa13.02□□□□□ -0.33
NPAS3-202ENST00000356141 LENEPQ9Y5L5 61 aa13.02□□□□□ -0.33
NPAS3-202ENST00000356141 HILS1P60008 231 aa13.02□□□□□ -0.33
NPAS3-202ENST00000356141 GTF2H5Q6ZYL4 71 aa13.01□□□□□ -0.33
NPAS3-202ENST00000356141 GATD1Q8NB37 220 aa13.01□□□□□ -0.33
NPAS3-202ENST00000356141 U3KQK5 164 aa13.01□□□□□ -0.33
NPAS3-202ENST00000356141 SMIM20Q8N5G0 67 aa13.01□□□□□ -0.33
NPAS3-202ENST00000356141 MAP1LC3CQ9BXW4 147 aa13□□□□□ -0.33
NPAS3-202ENST00000356141 AMTNQ6UX39 209 aa12.99□□□□□ -0.33
NPAS3-202ENST00000356141 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
NPAS3-202ENST00000356141 H3BMM0 161 aa12.99□□□□□ -0.33
NPAS3-202ENST00000356141 CACNG7P62955 275 aa12.99□□□□□ -0.33
NPAS3-202ENST00000356141 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
NPAS3-202ENST00000356141 TEX29Q8N6K0 151 aa12.99□□□□□ -0.33
NPAS3-202ENST00000356141 C12orf54Q6X4T0 127 aa12.98□□□□□ -0.33
NPAS3-202ENST00000356141 ZNF747Q9BV97 191 aa12.98□□□□□ -0.33
NPAS3-202ENST00000356141 ODF3L2Q3SX64 289 aa12.98□□□□□ -0.33
NPAS3-202ENST00000356141 NRACQ8N912 160 aa12.98□□□□□ -0.33
NPAS3-202ENST00000356141 RPL35AP18077 110 aaKnown RBP12.98□□□□□ -0.33
NPAS3-202ENST00000356141 PROK1P58294 105 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms