RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 SFRP2Q96HF1 295 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 SAMD10Q9BYL1 202 aa12.54□□□□□ -0.4
PDLIM7-202ENST00000355841 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
PDLIM7-202ENST00000355841 SPANXN1Q5VSR9 72 aa12.53□□□□□ -0.4
PDLIM7-202ENST00000355841 LYZL1Q6UWQ5 148 aa12.53□□□□□ -0.4
PDLIM7-202ENST00000355841 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
PDLIM7-202ENST00000355841 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
PDLIM7-202ENST00000355841 CTDSP1Q9GZU7 261 aa12.53□□□□□ -0.4
PDLIM7-202ENST00000355841 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
PDLIM7-202ENST00000355841 RS1O15537 224 aa12.52□□□□□ -0.4
PDLIM7-202ENST00000355841 RPS10P46783 165 aaKnown RBP12.52□□□□□ -0.4
PDLIM7-202ENST00000355841 NDUFAF3Q9BU61 184 aa12.52□□□□□ -0.4
PDLIM7-202ENST00000355841 APLNQ9ULZ1 77 aa12.52□□□□□ -0.4
PDLIM7-202ENST00000355841 A0A087WWL8 130 aa12.51□□□□□ -0.41
PDLIM7-202ENST00000355841 V9GYV3 84 aa12.51□□□□□ -0.41
PDLIM7-202ENST00000355841 VSIG2Q96IQ7 327 aa12.51□□□□□ -0.41
PDLIM7-202ENST00000355841 MSRB1Q9NZV6 116 aa12.51□□□□□ -0.41
PDLIM7-202ENST00000355841 HHLA3Q9XRX5 114 aa12.51□□□□□ -0.41
PDLIM7-202ENST00000355841 A8MWL6 223 aa12.5□□□□□ -0.41
PDLIM7-202ENST00000355841 A8MWV9 139 aa12.5□□□□□ -0.41
PDLIM7-202ENST00000355841 NXPH4O95158 308 aa12.5□□□□□ -0.41
PDLIM7-202ENST00000355841 NUDT3O95989 172 aa12.5□□□□□ -0.41
PDLIM7-202ENST00000355841 PIK3CD-AS1Q5SR53 167 aa12.5□□□□□ -0.41
PDLIM7-202ENST00000355841 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
PDLIM7-202ENST00000355841 OR10G8Q8NGN5 311 aa12.5□□□□□ -0.41
PDLIM7-202ENST00000355841 NACAE9PAV3 2078 aa12.5□□□□□ -0.41
PDLIM7-202ENST00000355841 A0A1W2PPQ1 181 aa12.49□□□□□ -0.41
PDLIM7-202ENST00000355841 FAM210BQ96KR6 192 aa12.49□□□□□ -0.41
PDLIM7-202ENST00000355841 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
PDLIM7-202ENST00000355841 PRO0255Q9UI72 69 aa12.49□□□□□ -0.41
PDLIM7-202ENST00000355841 TRBV24-1A0A075B6N3 115 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 PAX4O43316 350 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 CTRLP40313 264 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 CRYBA4P53673 196 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 CT83Q5H943 113 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 Q6ZSN1 163 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 F2Z2F3 143 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 CRYGDP07320 174 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 TSKUQ8WUA8 353 aa12.48□□□□□ -0.41
PDLIM7-202ENST00000355841 KMT2CQ8NEZ4 4911 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-202ENST00000355841 GATA1P15976 413 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-202ENST00000355841 NTF3P20783 257 aa12.47□□□□□ -0.41
PDLIM7-202ENST00000355841 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-202ENST00000355841 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
PDLIM7-202ENST00000355841 LOC100131303A0A0U1RQF7 123 aa12.46□□□□□ -0.41
PDLIM7-202ENST00000355841 HIGD1CA8MV81 97 aa12.46□□□□□ -0.41
PDLIM7-202ENST00000355841 SLC25A29Q8N8R3 303 aa12.46□□□□□ -0.41
PDLIM7-202ENST00000355841 S100PP25815 95 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 TCTAP57738 103 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 CACNG7P62955 275 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 SLAQ13239 276 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 TWIST1Q15672 202 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 ZFP2Q6ZN57 461 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 NIT2Q9NQR4 276 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 URGCP-MRPS24S4R325 110 aa12.45□□□□□ -0.42
PDLIM7-202ENST00000355841 A0A096LPF7 62 aa12.44□□□□□ -0.42
PDLIM7-202ENST00000355841 GYPEP15421 78 aa12.44□□□□□ -0.42
PDLIM7-202ENST00000355841 S100A2P29034 98 aa12.44□□□□□ -0.42
PDLIM7-202ENST00000355841 AP1S3Q96PC3 154 aa12.44□□□□□ -0.42
PDLIM7-202ENST00000355841 CNFNQ9BYD5 112 aa12.44□□□□□ -0.42
PDLIM7-202ENST00000355841 GFRA4Q9GZZ7 299 aa12.44□□□□□ -0.42
PDLIM7-202ENST00000355841 Q9UF83 564 aa12.44□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BKO60814 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 LY6G6CO95867 125 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BJP06899 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 EVI2AP22794 236 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BOP23527 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BBP33778 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 FOXA3P55318 350 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 NDUFA6P56556 154 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BDP58876 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BCP62807 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST2H2BEQ16778 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BHQ93079 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BNQ99877 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 HIST1H2BMQ99879 126 aa12.43□□□□□ -0.42
PDLIM7-202ENST00000355841 H3BNG1 76 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 RHODO00212 210 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 CIDEAO60543 219 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 SMIM27A0A1W2PRY6 76 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 K7EQD1 137 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 PPP1R2P9O14990 202 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 TRGC2P03986 189 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 SMIM17P0DL12 118 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 P0DMU3 169 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 FAM231AP0DMU4 169 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 FAM231CP0DMU5 169 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 ZNF56Q15929 161 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 WDR73Q6P4I2 378 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 LINC00476Q8WZB0 136 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 ANAPC16Q96DE5 110 aa12.42□□□□□ -0.42
PDLIM7-202ENST00000355841 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
PDLIM7-202ENST00000355841 FAM231BA6NCW3 169 aa12.41□□□□□ -0.42
PDLIM7-202ENST00000355841 MGPP08493 103 aa12.41□□□□□ -0.42
PDLIM7-202ENST00000355841 NAT8BQ9UHF3 227 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms